Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0361g00090.t01
CDS Infomation

cds chromosome:12X:Un:25650943:25653446:1 gene:VIT_00s0361g00090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGTTCTGCTGTGATCTTGAAGTGGATGTCAACGGCGAAGAGACATTCTTACTGGAT
AAGAAAATTCTTATAACTTTCTCGAGTAAACTAAGCAGATTGTTCAGTGGATTGACAAGA
AAGGCTGGGACCCTGAAAGTGATACTACCTGACTTTCCAGGAGGGGCGGAGGGTTTTGAG
CTCATTGCAAGGTTCTGCTATAACAATGGTAGAGCTGAGATAAGTCCCGTTAATGCCGTC
CTGCTAAATTGTGCTGCCTGTTTCATGGAAATGGACCAAGTTTGCTCTGGAACACCCAGC
TTATTACACCAAACTGAGAAATCCCTTGAAGAGATCAACTCCTGGACTTGGTCCCAGCTC
CTAGTAGCTTTGAAACAGTGCCAAGATTTGCTTCCAGCCATGAATTCTTCATGTTTGCTT
CAGAAAATCTTGGATTCACTTGTGGGGAGGCTTGCCTTGCCTAGTGTTGTGAGCCCATGT
ACTCCATCCTCATCCTCAGGCTGCTCTAGTTTTCAGCTTTCCAGTGATTCAAGAAGCACC
GACAGCGTGAAAAACAGCTGGTCTCGCACAACTTGGTGGTTTGAAGATCTCGTGTTTTTG
AATGCTGATTTGATTGATAAGGTGATAAAAATGATGGTATCCCAGAAATTGGATCATGTT
ACACTAAGTCGGTTCCTCTTTTATTACCAAAAATCCAGATTTCTTATTGCTGGGCCAGCT
GAAAAGAGCAAAACCACAGAGGTTGTAGTCACTCTGCTTTCTTCCCTAGATAGGAGCTCT
GTTTCTTGCAAAGGGTTATATGATATTCTTCGGATGGCTTTGAGTTTGAAAGTAAGCAAA
TGTTGCAAGAACATACTAGAGAGTCTGATTGGTTCGCAGCTGGACCAAGCAACATTGGAT
AATCTGCTTGTTCCATCTCCACATGGCAAGGGTTGTATATACTATGTGAATCTGGTTTTG
AGGTTGCTGAAATCATTTCTTGGAGGTCAATTTTCATCAACTCAATTGAAAAAGGTTGCT
GCCTTGATGGACTTGTACATTGCTGAAGTTGCCCCAGATTCCAGTCTGAAACCTACCAAG
TTTGTGGCGTTAGTTGCTGCCCTGCCAGATTCTGCAAGAGACTCTTATGATGGTATTTAC
CAAGCTACAGACATCTATCTAGAGGTCCATGGCGGATTAAGTGAAGAAGAAAAGATGACA
GTCTGCTGTGCACTCAACTATGAGAAGCTCTCCCCAGAAGCTTTGAGACACCTAGCTCGA
AACTCAAAACTTCCATCAAGAGCAGCAGCTAAAGCTGTCATCACCTCTCAGCAAACCAAG
CTCAAAAGCTTACTCCCTAACACCCACCCTCTCAAGGATTTCAGTTATTCAGCATCTTGT
TACACCATAGAGGGAAGTAAGGACAAGAAAGGGGATCTTGATCAAATTCTTCTGCACGTG
AGAAAAATCGAACTTTCTACCGAGAATGAGAGGCTTAGAGCACACTTGCAAGGGATGCAA
TGGAGGGTGATAGAATTGGAGAAGGCTTGTAAAGGAATGCAGACGCGGATGGAACACATG
ATGAAATCAAGACTACAAGCCAGATCCTTGCCCAAGCTCTGTTCATGA

Peptide Sequence

PEP ID

VIT_00s0361g00090.t01
PEP Infomation

pep chromosome:12X:Un:25650943:25653446:1 gene:VIT_00s0361g00090 transcript:VIT_00s0361g00090.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGFCCDLEVDVNGEETFLLDKKILITFSSKLSRLFSGLTRKAGTLKVILPDFPGGAEGFE
LIARFCYNNGRAEISPVNAVLLNCAACFMEMDQVCSGTPSLLHQTEKSLEEINSWTWSQL
LVALKQCQDLLPAMNSSCLLQKILDSLVGRLALPSVVSPCTPSSSSGCSSFQLSSDSRST
DSVKNSWSRTTWWFEDLVFLNADLIDKVIKMMVSQKLDHVTLSRFLFYYQKSRFLIAGPA
EKSKTTEVVVTLLSSLDRSSVSCKGLYDILRMALSLKVSKCCKNILESLIGSQLDQATLD
NLLVPSPHGKGCIYYVNLVLRLLKSFLGGQFSSTQLKKVAALMDLYIAEVAPDSSLKPTK
FVALVAALPDSARDSYDGIYQATDIYLEVHGGLSEEEKMTVCCALNYEKLSPEALRHLAR
NSKLPSRAAAKAVITSQQTKLKSLLPNTHPLKDFSYSASCYTIEGSKDKKGDLDQILLHV
RKIELSTENERLRAHLQGMQWRVIELEKACKGMQTRMEHMMKSRLQARSLPKLCS

Transcript Sequence

Transcript ID

VIT_00s0361g00090.t01
Transcript Infomation

cdna chromosome:12X:Un:25650943:25653446:1 gene:VIT_00s0361g00090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGTTCTGCTGTGATCTTGAAGTGGATGTCAACGGCGAAGAGACATTCTTACTGGAT
AAGAAAATTCTTATAACTTTCTCGAGTAAACTAAGCAGATTGTTCAGTGGATTGACAAGA
AAGGCTGGGACCCTGAAAGTGATACTACCTGACTTTCCAGGAGGGGCGGAGGGTTTTGAG
CTCATTGCAAGGTTCTGCTATAACAATGGTAGAGCTGAGATAAGTCCCGTTAATGCCGTC
CTGCTAAATTGTGCTGCCTGTTTCATGGAAATGGACCAAGTTTGCTCTGGAACACCCAGC
TTATTACACCAAACTGAGAAATCCCTTGAAGAGATCAACTCCTGGACTTGGTCCCAGCTC
CTAGTAGCTTTGAAACAGTGCCAAGATTTGCTTCCAGCCATGAATTCTTCATGTTTGCTT
CAGAAAATCTTGGATTCACTTGTGGGGAGGCTTGCCTTGCCTAGTGTTGTGAGCCCATGT
ACTCCATCCTCATCCTCAGGCTGCTCTAGTTTTCAGCTTTCCAGTGATTCAAGAAGCACC
GACAGCGTGAAAAACAGCTGGTCTCGCACAACTTGGTGGTTTGAAGATCTCGTGTTTTTG
AATGCTGATTTGATTGATAAGGTGATAAAAATGATGGTATCCCAGAAATTGGATCATGTT
ACACTAAGTCGGTTCCTCTTTTATTACCAAAAATCCAGATTTCTTATTGCTGGGCCAGCT
GAAAAGAGCAAAACCACAGAGGTTGTAGTCACTCTGCTTTCTTCCCTAGATAGGAGCTCT
GTTTCTTGCAAAGGGTTATATGATATTCTTCGGATGGCTTTGAGTTTGAAAGTAAGCAAA
TGTTGCAAGAACATACTAGAGAGTCTGATTGGTTCGCAGCTGGACCAAGCAACATTGGAT
AATCTGCTTGTTCCATCTCCACATGGCAAGGGTTGTATATACTATGTGAATCTGGTTTTG
AGGTTGCTGAAATCATTTCTTGGAGGTCAATTTTCATCAACTCAATTGAAAAAGGTTGCT
GCCTTGATGGACTTGTACATTGCTGAAGTTGCCCCAGATTCCAGTCTGAAACCTACCAAG
TTTGTGGCGTTAGTTGCTGCCCTGCCAGATTCTGCAAGAGACTCTTATGATGGTATTTAC
CAAGCTACAGACATCTATCTAGAGGTCCATGGCGGATTAAGTGAAGAAGAAAAGATGACA
GTCTGCTGTGCACTCAACTATGAGAAGCTCTCCCCAGAAGCTTTGAGACACCTAGCTCGA
AACTCAAAACTTCCATCAAGAGCAGCAGCTAAAGCTGTCATCACCTCTCAGCAAACCAAG
CTCAAAAGCTTACTCCCTAACACCCACCCTCTCAAGGATTTCAGTTATTCAGCATCTTGT
TACACCATAGAGGGAAGTAAGGACAAGAAAGGGGATCTTGATCAAATTCTTCTGCACGTG
AGAAAAATCGAACTTTCTACCGAGAATGAGAGGCTTAGAGCACACTTGCAAGGGATGCAA
TGGAGGGTGATAGAATTGGAGAAGGCTTGTAAAGGAATGCAGACGCGGATGGAACACATG
ATGAAATCAAGACTACAAGCCAGATCCTTGCCCAAGCTCTGTTCATGA