Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0360g00050.t01
CDS Infomation

cds chromosome:12X:Un:25539853:25557985:-1 gene:VIT_00s0360g00050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGCCAATTTCTGGACGTCGTCTCACTACAAACAACTTCTCGACCAAGAAGAGGTG
GATGTGGTGCACCCTCTTGACAAAGAGAAGGGCGTAACTCTTGAGGATTTCAAGCTCATT
AAGATGCACATGGCCAATTATATTGGGAGATTGGGTCAAAATGTTAAAGTGAGGCAAAGG
GTTGTAGCTACTGCCATTACATATATGAGACGTGTTTACACCAGAAAAGCTATGACAGAA
TATGATCCACGTCTTGTGGCTCCAACTAGCTTGTACTTGGCTGCAAAAGCAGAAGAAAGC
ACTGTGCAGGCTAGACTTCTTGTATTTTACGTCAGAAAATTAAATCCAGATGAAAAGTAT
AGGTATGAGATCAAGGACATACTTGAAATGGAAATGAAGATCTTAGAAGCTCTCAACTAT
TATTTAGTTGTATTCCATCCTTACCGTGCATTGTCTCAGTTGCTTCAAGATGCCAACCTG
AATGATCTAACTCAGTTATCTTGGGGAATTGTCAATGACACCTACAAAATGGATCTTATT
CTCATTTATCCTCCACATCTGATTGCCTTAGCTTGCATATACATTGCAAGTGTACACAAA
GATAAAGAAACCACTGCTTGGTTTGAAGAGCTTCGAGTTGACATGAATGTGGTAAAAAAT
ATCTCCATGGAGATACTAGATTTCTATGACAGCCACAGAACGATCACTGAAGACAGGATC
ACTACCACTTTCAACAAGCTAGCTTTGAGATCATAA

Peptide Sequence

PEP ID

VIT_00s0360g00050.t01
PEP Infomation

pep chromosome:12X:Un:25539853:25557985:-1 gene:VIT_00s0360g00050 transcript:VIT_00s0360g00050.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAANFWTSSHYKQLLDQEEVDVVHPLDKEKGVTLEDFKLIKMHMANYIGRLGQNVKVRQR
VVATAITYMRRVYTRKAMTEYDPRLVAPTSLYLAAKAEESTVQARLLVFYVRKLNPDEKY
RYEIKDILEMEMKILEALNYYLVVFHPYRALSQLLQDANLNDLTQLSWGIVNDTYKMDLI
LIYPPHLIALACIYIASVHKDKETTAWFEELRVDMNVVKNISMEILDFYDSHRTITEDRI
TTTFNKLALRS

Transcript Sequence

Transcript ID

VIT_00s0360g00050.t01
Transcript Infomation

cdna chromosome:12X:Un:25539853:25557985:-1 gene:VIT_00s0360g00050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AACGGTTCGAAAACTAGACTTCTTCCCAAAATCCTTTCTCCGTCAACCATGGCTGCCAAT
TTCTGGACGTCGTCTCACTACAAACAACTTCTCGACCAAGAAGAGGTGGATGTGGTGCAC
CCTCTTGACAAAGAGAAGGGCGTAACTCTTGAGGATTTCAAGCTCATTAAGATGCACATG
GCCAATTATATTGGGAGATTGGGTCAAAATGTTAAAGTGAGGCAAAGGGTTGTAGCTACT
GCCATTACATATATGAGACGTGTTTACACCAGAAAAGCTATGACAGAATATGATCCACGT
CTTGTGGCTCCAACTAGCTTGTACTTGGCTGCAAAAGCAGAAGAAAGCACTGTGCAGGCT
AGACTTCTTGTATTTTACGTCAGAAAATTAAATCCAGATGAAAAGTATAGGTATGAGATC
AAGGACATACTTGAAATGGAAATGAAGATCTTAGAAGCTCTCAACTATTATTTAGTTGTA
TTCCATCCTTACCGTGCATTGTCTCAGTTGCTTCAAGATGCCAACCTGAATGATCTAACT
CAGTTATCTTGGGGAATTGTCAATGACACCTACAAAATGGATCTTATTCTCATTTATCCT
CCACATCTGATTGCCTTAGCTTGCATATACATTGCAAGTGTACACAAAGATAAAGAAACC
ACTGCTTGGTTTGAAGAGCTTCGAGTTGACATGAATGTGGTAAAAAATATCTCCATGGAG
ATACTAGATTTCTATGACAGCCACAGAACGATCACTGAAGACAGGATCACTACCACTTTC
AACAAGCTAGCTTTGAGATCATAAATGGTTTGGAACCAGGCCATGCACCCATGGTAGGGC
ATTCCTGTAGAAGCTAAAATGGCGAAGAAGGCTCACACCAGGGGTAAAATTTTCTGAAGG
TTCCATGTTGTTCAGCTGTAAGAGATGGATGGATACTGCAACAACCATGGCAGGGGTATT
GAGTGTATCAGAGAAGTAATTTGATGCAGCATTCTGGAAAATAAGTTGAGTTTCCTGACT
GAAAAATCTTAGGGACCAATTTTCAGGTGAGTTGTTTGTAAATGATTGAGATAAATTGCT
GACGTTATCTAGTAAAAAATATCTCAATGGAGATACTAGATTTCTATGACAGCCACAGAA
CGATCACTGAAGACAGGATCACTACCACTTTCAACAAGCTAGCTTTGAGATCATAAATGG
TTTGGAACCAGGCCATGCACCCATGGTAGGGCATTCCTGTAGAAGCTAAAATGGTGAAGA
AGGCTCACACCAGGGGTAAAATTTTCTGAAGGTTCCATGTTTGTTCAGCTGTAAGAGATG
GATGGATACTGCAACAACCATGGCAGGGGTATTGAGTGTATCAGAGAAGTAATTTGATGC
AGCATTCTGGAAAATAAGTTGAGTTTCCTGACTGAAAAATCTTAGGGACCAATTTTCAGG
TGAGTTGTTTGTAAATGATTGAGATAAATTGCTGACGTTATCTACTACAAACTGTATCAA
AACCTGGAAAAGTGATGAGACTTGCAATTGAGTGCACTTTGATTCAAG