Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0357g00060.t01
CDS Infomation

cds chromosome:12X:Un:25314549:25317669:-1 gene:VIT_00s0357g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGTTCTTGCTTGTACGTGAAATGTGTGTGGGCTTTCTATCTCTTTTCATCATGGGTC
CCCACTCTTTTGTTTGCACAGGGTGCAGATCCTTATTTGCCAGTTAAAGCTGTGAATCTA
GGAAATTGGCTTGTTACAGAGGGATGGATGAAACCTGAACTCTTTGCTGGGATACCCAAT
CAAGATCTTTTGGATGGAACTCAAGTGCAGTTCATGTCTACGAAGCTGCAGAAGTATCTC
GCCGCTGAAAATGGGGGTGGGACAGATGTTGTTGCCAACCGCACCTCGCCCTCTGGCTGG
GAGACTTTCAGGTTGTGGAGGATCAATAAGTCAACTTTCAATCTCAGAGTGTTTAACAAA
CAGTTCTTTGGACTAGAAAATCAAGGCAAAGGAAACAAAGTGGTATCGGTTCTAAATTCC
CCTGGGAACTCAGAAACATTTCAGATAGTAAGGAAGAACGACGATCAAAATCGAGTTCGC
ATAAAAGCATCAAATGGCCTCTTCCTCCAGGCAAAACCGGGGCTGGTGACTGCAGACTAT
GGAGGCTCAGGTTGGGATGACAATAATCCATCCGTCTTCCAAATGAAGATAGTCCGGACC
TTACAAGGAGAATACCAAATCACTAATGGCTATGGTCCAGACAGAGCCCCTCAAGTCATG
CAGGATCACTGGAATGCATACATCACTAATGAGGATTTCAGATTCTTGTCATCAAATGGT
CTGAATGCGGTTAGGATTCCAGTTGGGTGGTGGATAGCGAGCGACCCAACACCACCAAAG
CCTTTTGTGGGGGGCTCCTTAAAGGCCTTGGACAATGCTTTCACATGGGCACAGAACAAC
GGCATGAAGATTATAGTTGATCTGCATGCAGTTCAAGGTTCACAAAATGGCAACGATCAT
AGTGGGACCAGAGATGGGTTTCAGGAATGGGGAGACTCCAATATTCAAGATACTGTTGCA
GTCATAGACTTCCTAGCAGCAAGATATGCCAACAACCCGAGTCTAGCATCCATTGAGTTG
ATGAATGAGCCTCTGGCTCCAGGAGTTACACTCAATGATCTTAAGAAGTATTACAAAGCT
GGTTACGATGCCGTGAGGAAGTACACATCAAATGCTTATGTGATCCTATCGAACCGACTG
GGGCCTGCTGACTCCAAGGAGCTCCTGGACTTCGCCAGGGGCCTTAATCGTGTAGTGATC
GATGTGCATTACTACAGCCTCTTCTCAGATATGTTTAACAACATGAACGTACAACAGAAT
ATTGATTTCATCTATAGCCAGAGAGCTTCAGACCTCAGTGCTGTTACCACTTCCAATGGC
CCTCTCAGTTTTGTAGGGGAATGGACCGCAGAATGGGCAAAAAGTGGAGCATCAAAGAAA
GACTACCAGAGATTTGCAAAAGCTCAAATAGATGTGTACAGGCGTGCCACTTTTGGATGG
GCGTATTGGGCTTACAGATGTGCTCAGAACCACTGGAGCCTCAAGTGGATGATTGAGAAC
GGCCATATAAACCTCGGAAGTTCCTAA

Peptide Sequence

PEP ID

VIT_00s0357g00060.t01
PEP Infomation

pep chromosome:12X:Un:25314549:25317669:-1 gene:VIT_00s0357g00060 transcript:VIT_00s0357g00060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSSCLYVKCVWAFYLFSSWVPTLLFAQGADPYLPVKAVNLGNWLVTEGWMKPELFAGIPN
QDLLDGTQVQFMSTKLQKYLAAENGGGTDVVANRTSPSGWETFRLWRINKSTFNLRVFNK
QFFGLENQGKGNKVVSVLNSPGNSETFQIVRKNDDQNRVRIKASNGLFLQAKPGLVTADY
GGSGWDDNNPSVFQMKIVRTLQGEYQITNGYGPDRAPQVMQDHWNAYITNEDFRFLSSNG
LNAVRIPVGWWIASDPTPPKPFVGGSLKALDNAFTWAQNNGMKIIVDLHAVQGSQNGNDH
SGTRDGFQEWGDSNIQDTVAVIDFLAARYANNPSLASIELMNEPLAPGVTLNDLKKYYKA
GYDAVRKYTSNAYVILSNRLGPADSKELLDFARGLNRVVIDVHYYSLFSDMFNNMNVQQN
IDFIYSQRASDLSAVTTSNGPLSFVGEWTAEWAKSGASKKDYQRFAKAQIDVYRRATFGW
AYWAYRCAQNHWSLKWMIENGHINLGSS

Transcript Sequence

Transcript ID

VIT_00s0357g00060.t01
Transcript Infomation

cdna chromosome:12X:Un:25314549:25317669:-1 gene:VIT_00s0357g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGTTCTTGCTTGTACGTGAAATGTGTGTGGGCTTTCTATCTCTTTTCATCATGGGTC
CCCACTCTTTTGTTTGCACAGGGTGCAGATCCTTATTTGCCAGTTAAAGCTGTGAATCTA
GGAAATTGGCTTGTTACAGAGGGATGGATGAAACCTGAACTCTTTGCTGGGATACCCAAT
CAAGATCTTTTGGATGGAACTCAAGTGCAGTTCATGTCTACGAAGCTGCAGAAGTATCTC
GCCGCTGAAAATGGGGGTGGGACAGATGTTGTTGCCAACCGCACCTCGCCCTCTGGCTGG
GAGACTTTCAGGTTGTGGAGGATCAATAAGTCAACTTTCAATCTCAGAGTGTTTAACAAA
CAGTTCTTTGGACTAGAAAATCAAGGCAAAGGAAACAAAGTGGTATCGGTTCTAAATTCC
CCTGGGAACTCAGAAACATTTCAGATAGTAAGGAAGAACGACGATCAAAATCGAGTTCGC
ATAAAAGCATCAAATGGCCTCTTCCTCCAGGCAAAACCGGGGCTGGTGACTGCAGACTAT
GGAGGCTCAGGTTGGGATGACAATAATCCATCCGTCTTCCAAATGAAGATAGTCCGGACC
TTACAAGGAGAATACCAAATCACTAATGGCTATGGTCCAGACAGAGCCCCTCAAGTCATG
CAGGATCACTGGAATGCATACATCACTAATGAGGATTTCAGATTCTTGTCATCAAATGGT
CTGAATGCGGTTAGGATTCCAGTTGGGTGGTGGATAGCGAGCGACCCAACACCACCAAAG
CCTTTTGTGGGGGGCTCCTTAAAGGCCTTGGACAATGCTTTCACATGGGCACAGAACAAC
GGCATGAAGATTATAGTTGATCTGCATGCAGTTCAAGGTTCACAAAATGGCAACGATCAT
AGTGGGACCAGAGATGGGTTTCAGGAATGGGGAGACTCCAATATTCAAGATACTGTTGCA
GTCATAGACTTCCTAGCAGCAAGATATGCCAACAACCCGAGTCTAGCATCCATTGAGTTG
ATGAATGAGCCTCTGGCTCCAGGAGTTACACTCAATGATCTTAAGAAGTATTACAAAGCT
GGTTACGATGCCGTGAGGAAGTACACATCAAATGCTTATGTGATCCTATCGAACCGACTG
GGGCCTGCTGACTCCAAGGAGCTCCTGGACTTCGCCAGGGGCCTTAATCGTGTAGTGATC
GATGTGCATTACTACAGCCTCTTCTCAGATATGTTTAACAACATGAACGTACAACAGAAT
ATTGATTTCATCTATAGCCAGAGAGCTTCAGACCTCAGTGCTGTTACCACTTCCAATGGC
CCTCTCAGTTTTGTAGGGGAATGGACCGCAGAATGGGCAAAAAGTGGAGCATCAAAGAAA
GACTACCAGAGATTTGCAAAAGCTCAAATAGATGTGTACAGGCGTGCCACTTTTGGATGG
GCGTATTGGGCTTACAGATGTGCTCAGAACCACTGGAGCCTCAAGTGGATGATTGAGAAC
GGCCATATAAACCTCGGAAGTTCCTAATATGAATATTAGTTAGCTACTATCCTTGCATCT
CCTTCCACTCTAAGTAATGGTTTCTCAGGGGAAATGTATTTCTTCAGCTAGTTATAATAA
GTGAAGAAGATGCAAATCTTTAAAGATATAA