Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0353g00060.t01
CDS Infomation

cds chromosome:12X:Un:25199833:25204702:1 gene:VIT_00s0353g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAAGCATTACTGGCTTCCTCTGTTACAATGTCTTGTGCTTCTGTTTCCTCACTCTC
TTCCCAATCATTGTCATCTCTGGAGACACCATAACTGCAAATCAGTCCATCACCAATGGC
CAAACCCTGGTGTCTGCCGGCGGGGATTTTGAGCTGGGGTTCTTTTCTCCCGGAGATTCA
AAGTGGTACGTGGGGATATGGTACAAAAACATTCCTAAAGAAAGAGTTGTCTGGGTCGCA
AACAGAGACAACCCAATTTTGACAAACTCCTCTGGGTCAGTTGTGAAGATTGGAGACCGC
GGAAATATTGTGATTATGGATGAAGATTTGCATGTTTTCTGGTCTACGAATGAATCCACG
GCAGTTAATCCAGTTGCGCAGCTGTTGGACACAGGGAATTTGGTGGTACGGGAAGACAAA
GATGCAGATCCCGAAAACTATCTTTGGCAGAGCTTTGATTATCTTACTGATACTTTGCTG
CCCGGAATGAAGCTAGGATGGGACCAGAAAACGGGTTCGAATCGGTACTTGACGTCGTGG
AAAAGCAAGGAAGATCCGTCCTCTGGAGATTATTCTTTCAAGCTAGATCCTCGAGGTTTC
CCTGAGATTTTCATATGGAACAAACAGGAAAAGAAGTACCGTAGTGGGCCATGGAATGGA
GTTAGATTCAGCGGGGTCCCGGAGATGAAATCCTCCTCTGTCTTCACCTTCGATTTCGAG
TGGAATCAGGATGGGGCATACTACTCGTATGAGCTCACAAACAAATCCATAACCTCCCGT
TTGATGGTGAGCTCAGCCGGCAGCCTCCAACGCTATACTTGGATCGAAACCAGGCAGGTT
TGGAACCTCTACTGGTTCGCTCCCAAAGATCAGTGCGACGACTACAGAGAATGCGGCCCC
TACGGAATCTGTGACACCAATTCCTCCCCGGTTTGCAAGTGCCCACGAGGGTTCGAGCCC
AAGAATCCACAGGCGTGGAACCTCAGAGATGGTTCCGATGGTTGTTCTAGAAAAACAGAG
TTCGATTGCAATAACGGAGATGGGTTCTTAGCATTGAAGAGAATGAAGCTGCCAGAAACT
GGGAGTTCATTCGTAGACAAGAGCATGAGTCTCAAGGACTGCGAAATGACTTGCCGGAAA
AACTGCTCTTGTACCGGTTACGCCAATCCGGAGATTACCTCCGACAAAGGTTGCATCATT
TGGACCACCGATCTCTTGGATATGAGAGAGTACGCAGAAGGAGAAGGTGGTCAAGACCTC
TATATTAGAGTTGCAGCTTCTGAATTAGGTTCTGAAAATGGTTCAAACAAGACAGTAAAA
ATTATCAAGGTCACTTGCATTACAGTTGGTAGTGCTGTTCTGCTACTTGGACTGGGAATC
TGTTATCTGTGGAAGAGGAAGAAAATGAAGATCATGTGGAATGGGAAGACAAGGCAAAGA
GGTCTAAGTGAAAGAAGCCATGATTATATTTTAAATGAAGCGGTTATTCCTAGTAAGAGA
GACTACACAGATGAGGTTAAGACAGATGAGCTAGAGCTGCCTCTGTTTGATTTTGGAACC
ATAGTGCTGGCTACAAACAACTTCTCTGACACTAATAAACTGGGACAAGGGGGTTTCGGC
TGCGTTTACAAGGGTATGTTGTTAGAAGGTGAGGAAATAGCAGTTAAGAGGCTTGCAAAG
AATTCTGGGCAAGGAATAGAAGAATTCATGAACGAGGTTAGGTTAATTGCAAGGCTTCAA
CACAGAAATCTGGTACAACTCCTTGGTTGTTGTGTTGAGATGGAAGAAAAGATGCTGATA
TATGAGTACATGCAAAACAGAAGCCTGGATTCAATTTTATTTGATGAGAAGAAAAGCTCA
TTGCTGGATTGGGGTAGGCGATTCAATATCATTTGTGGGGTTGCTCGAGGGCTGCTTTAT
CTACATCAAGATTCTAGATTTAGAATCATTCATAGGGATCTCAAAGCAAGCAACGTTCTA
CTTGATGGGGAAATGAACCCAAAAATATCAGATTTTGGTATGGCAAGAATTTTTGGGCGA
GATCAGACTGAAGCAAACACTAAGAGAGTGGTTGGGACATATGGTTATATGTCCCCTGAA
TACGCAATGGATGGGCTGTTCTCAGTGAAATCTGATGTCTTTAGTTTTGGTGTACTTGTT
TTGGAGATAATCAGTGGTAAGAAGAACAGGGGATTTTATCATTTGAACGATGAACACAAC
CTTCTTGGACATGCATGGAGGCTATGGAGAGAAGGGAAGGGGTTGGAGCTAATGGATTCA
TCAGTGAGCGAGTCATGTGCCCCATATGATGTGTTGAGATGCATCCAGGTTGGCCTCTTA
TGTGTCCAAGAGCATGCAGAAGATAGACCAGTAATGTCGTCTGTGGTCTTGATGTTGAGT
AGTGAAACTGCAACATTGCCATTGCCAAAGAACCCTGGGTTCTGCCTGGGAAGGAAACTT
GTGGAAACAGATTCATCTTCAAGCAAGCAAGAAGAAACATTCACTGTAAACCAAGTCACA
GTTACAGTTATGGACGCTCGGTAA

Peptide Sequence

PEP ID

VIT_00s0353g00060.t01
PEP Infomation

pep chromosome:12X:Un:25199833:25204702:1 gene:VIT_00s0353g00060 transcript:VIT_00s0353g00060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSITGFLCYNVLCFCFLTLFPIIVISGDTITANQSITNGQTLVSAGGDFELGFFSPGDS
KWYVGIWYKNIPKERVVWVANRDNPILTNSSGSVVKIGDRGNIVIMDEDLHVFWSTNEST
AVNPVAQLLDTGNLVVREDKDADPENYLWQSFDYLTDTLLPGMKLGWDQKTGSNRYLTSW
KSKEDPSSGDYSFKLDPRGFPEIFIWNKQEKKYRSGPWNGVRFSGVPEMKSSSVFTFDFE
WNQDGAYYSYELTNKSITSRLMVSSAGSLQRYTWIETRQVWNLYWFAPKDQCDDYRECGP
YGICDTNSSPVCKCPRGFEPKNPQAWNLRDGSDGCSRKTEFDCNNGDGFLALKRMKLPET
GSSFVDKSMSLKDCEMTCRKNCSCTGYANPEITSDKGCIIWTTDLLDMREYAEGEGGQDL
YIRVAASELGSENGSNKTVKIIKVTCITVGSAVLLLGLGICYLWKRKKMKIMWNGKTRQR
GLSERSHDYILNEAVIPSKRDYTDEVKTDELELPLFDFGTIVLATNNFSDTNKLGQGGFG
CVYKGMLLEGEEIAVKRLAKNSGQGIEEFMNEVRLIARLQHRNLVQLLGCCVEMEEKMLI
YEYMQNRSLDSILFDEKKSSLLDWGRRFNIICGVARGLLYLHQDSRFRIIHRDLKASNVL
LDGEMNPKISDFGMARIFGRDQTEANTKRVVGTYGYMSPEYAMDGLFSVKSDVFSFGVLV
LEIISGKKNRGFYHLNDEHNLLGHAWRLWREGKGLELMDSSVSESCAPYDVLRCIQVGLL
CVQEHAEDRPVMSSVVLMLSSETATLPLPKNPGFCLGRKLVETDSSSSKQEETFTVNQVT
VTVMDAR

Transcript Sequence

Transcript ID

VIT_00s0353g00060.t01
Transcript Infomation

cdna chromosome:12X:Un:25199833:25204702:1 gene:VIT_00s0353g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAAGCATTACTGGCTTCCTCTGTTACAATGTCTTGTGCTTCTGTTTCCTCACTCTC
TTCCCAATCATTGTCATCTCTGGAGACACCATAACTGCAAATCAGTCCATCACCAATGGC
CAAACCCTGGTGTCTGCCGGCGGGGATTTTGAGCTGGGGTTCTTTTCTCCCGGAGATTCA
AAGTGGTACGTGGGGATATGGTACAAAAACATTCCTAAAGAAAGAGTTGTCTGGGTCGCA
AACAGAGACAACCCAATTTTGACAAACTCCTCTGGGTCAGTTGTGAAGATTGGAGACCGC
GGAAATATTGTGATTATGGATGAAGATTTGCATGTTTTCTGGTCTACGAATGAATCCACG
GCAGTTAATCCAGTTGCGCAGCTGTTGGACACAGGGAATTTGGTGGTACGGGAAGACAAA
GATGCAGATCCCGAAAACTATCTTTGGCAGAGCTTTGATTATCTTACTGATACTTTGCTG
CCCGGAATGAAGCTAGGATGGGACCAGAAAACGGGTTCGAATCGGTACTTGACGTCGTGG
AAAAGCAAGGAAGATCCGTCCTCTGGAGATTATTCTTTCAAGCTAGATCCTCGAGGTTTC
CCTGAGATTTTCATATGGAACAAACAGGAAAAGAAGTACCGTAGTGGGCCATGGAATGGA
GTTAGATTCAGCGGGGTCCCGGAGATGAAATCCTCCTCTGTCTTCACCTTCGATTTCGAG
TGGAATCAGGATGGGGCATACTACTCGTATGAGCTCACAAACAAATCCATAACCTCCCGT
TTGATGGTGAGCTCAGCCGGCAGCCTCCAACGCTATACTTGGATCGAAACCAGGCAGGTT
TGGAACCTCTACTGGTTCGCTCCCAAAGATCAGTGCGACGACTACAGAGAATGCGGCCCC
TACGGAATCTGTGACACCAATTCCTCCCCGGTTTGCAAGTGCCCACGAGGGTTCGAGCCC
AAGAATCCACAGGCGTGGAACCTCAGAGATGGTTCCGATGGTTGTTCTAGAAAAACAGAG
TTCGATTGCAATAACGGAGATGGGTTCTTAGCATTGAAGAGAATGAAGCTGCCAGAAACT
GGGAGTTCATTCGTAGACAAGAGCATGAGTCTCAAGGACTGCGAAATGACTTGCCGGAAA
AACTGCTCTTGTACCGGTTACGCCAATCCGGAGATTACCTCCGACAAAGGTTGCATCATT
TGGACCACCGATCTCTTGGATATGAGAGAGTACGCAGAAGGAGAAGGTGGTCAAGACCTC
TATATTAGAGTTGCAGCTTCTGAATTAGGTTCTGAAAATGGTTCAAACAAGACAGTAAAA
ATTATCAAGGTCACTTGCATTACAGTTGGTAGTGCTGTTCTGCTACTTGGACTGGGAATC
TGTTATCTGTGGAAGAGGAAGAAAATGAAGATCATGTGGAATGGGAAGACAAGGCAAAGA
GGTCTAAGTGAAAGAAGCCATGATTATATTTTAAATGAAGCGGTTATTCCTAGTAAGAGA
GACTACACAGATGAGGTTAAGACAGATGAGCTAGAGCTGCCTCTGTTTGATTTTGGAACC
ATAGTGCTGGCTACAAACAACTTCTCTGACACTAATAAACTGGGACAAGGGGGTTTCGGC
TGCGTTTACAAGGGTATGTTGTTAGAAGGTGAGGAAATAGCAGTTAAGAGGCTTGCAAAG
AATTCTGGGCAAGGAATAGAAGAATTCATGAACGAGGTTAGGTTAATTGCAAGGCTTCAA
CACAGAAATCTGGTACAACTCCTTGGTTGTTGTGTTGAGATGGAAGAAAAGATGCTGATA
TATGAGTACATGCAAAACAGAAGCCTGGATTCAATTTTATTTGATGAGAAGAAAAGCTCA
TTGCTGGATTGGGGTAGGCGATTCAATATCATTTGTGGGGTTGCTCGAGGGCTGCTTTAT
CTACATCAAGATTCTAGATTTAGAATCATTCATAGGGATCTCAAAGCAAGCAACGTTCTA
CTTGATGGGGAAATGAACCCAAAAATATCAGATTTTGGTATGGCAAGAATTTTTGGGCGA
GATCAGACTGAAGCAAACACTAAGAGAGTGGTTGGGACATATGGTTATATGTCCCCTGAA
TACGCAATGGATGGGCTGTTCTCAGTGAAATCTGATGTCTTTAGTTTTGGTGTACTTGTT
TTGGAGATAATCAGTGGTAAGAAGAACAGGGGATTTTATCATTTGAACGATGAACACAAC
CTTCTTGGACATGCATGGAGGCTATGGAGAGAAGGGAAGGGGTTGGAGCTAATGGATTCA
TCAGTGAGCGAGTCATGTGCCCCATATGATGTGTTGAGATGCATCCAGGTTGGCCTCTTA
TGTGTCCAAGAGCATGCAGAAGATAGACCAGTAATGTCGTCTGTGGTCTTGATGTTGAGT
AGTGAAACTGCAACATTGCCATTGCCAAAGAACCCTGGGTTCTGCCTGGGAAGGAAACTT
GTGGAAACAGATTCATCTTCAAGCAAGCAAGAAGAAACATTCACTGTAAACCAAGTCACA
GTTACAGTTATGGACGCTCGGTAATGAAATACATGTCCTCATCTAGTGTCTTTGTATA