Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0341g00040.t01
CDS Infomation

cds chromosome:12X:Un:24409824:24415586:1 gene:VIT_00s0341g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAAAGGCTATTGCAGTTGGTGGCTGTTGTCCTCATGTACAGAATCAATTGGAAAAAA
CTGTTCGTTGTTGTAGCCATAATGACAACAGCTGGTATGGTACTTCAAACCTATACACTT
CCTTATCCAATGGCGACCTGGTTCCTCCCTCCACAAACGATGGTCTCTTCCTACAAATCC
TTGAATGGTAGTACCGTTCATTTGACCGAGACCCTTTCATTGGAAAGTGCCGAGCAGTTT
CAACTTGTTCCTACTGCCCCTGTTGTGTCTTTGAATTCTTCCACTGAATTGGTTAAGTCA
GTGCCAATTGTTGAAGAGAGAGCTCAAGTTTCTCCAAGGAGAAATCCTTCATCCAGAAGG
AGAAGGAAGAACGCAAAGATTGACAAAACCAATGAGCAAAAGGTTGTATTTCATCCGCCT
CCACCTAGAACTGTGCCCACTCGCTTGCAGAGATATATTTGGTCATTGCCACCTGATGAG
GCCCTTTTATTTGCTAAAAGGGAGATCCAGAATGTCTCAACTGTTACTGATGATCCTGAG
CTGTATGCCTCTTTATTCCACAATGTTTCTGTTTTCAAAAGGAGTTATGAATTGATGGAA
ACCATACTTAAAGTCTACATTTACCCAGATGGAGCGAGACCCATTTTTCATGCACCCCAT
CTCAGAGGAATTTATGCTTCTGAAGGGTGGTTTATGAAGTTAATGGAGGAAAACAGGCAG
TTTGTCACAAGGGACCCAAAAAAGGCTCACTTGTTTTATCTTCCATACAGTGCACGCCAG
CTGGAGACAGCACTCTATGTGCCCAATTCACATAATATCAGACCACTGTCGATCTTCTTA
AGGGACCATGTGAACATGATCGCAGCAAAGTATCCTTTCTGGAACCGCACACATGGATCA
GACCATTTTTTAGTTGCTTGCCACGACTGGGGCCCTTACACAGTGAATGAACACCAGGAA
CTGAGCAGAAACACCATAAAAGCTCTTTGCAATGCTGATCTATCAGAAGGCATATTTGTT
GCAGGGAAAGATGTTTCCCTTCCAGAAACTACCATTAGGAATCCAAGGCGCCCTCTAAGA
AATGTTGGTGGAAGACGAGTATCACAGCGTCCAATTCTTGCTTTTTTCGCTGGAAACATG
CATGGTAGGGTCCGCCCCACCCTTCTCAAGTACTGGTCTGATAAAGATGAAGACATGAGG
ATTTATGGACCACTACCCAATAGAATCTCCAGAAAAATGTCCTATATTCAGCATATGAAA
TCAAGCAGATTCTGCATTTGCCCAATGGGATATGAAGTGAACAGCCCCAGGATTGTTGAG
GCAATATATTATGAGTGTGTCCCAGTGATCATAGCCGATAACTTTGTTCCTCCACTCAAC
GATGTGTTGGATTGGACTGCATTTTCTGTAATTGTGGCTGAGAAGGATATACCCAAACTG
AAGGAAATCCTTTTGGCTATTCCCCTGAGACGGTACCTTGTAATGCAAACAAACGTGAAG
ATGGTGCAGAAGCATTTTCTCTGGAACCCAAAACCAGTCAGATATGATTTGTTCCACATG
ATTCTGCATTCAATTTGGTTTAGTAGGTTGAACCAGATTCAAATCTCAGTGAATGATACA
GCACCAGTTGCCCTGGGACTACGTTTGATAATCAGAAAATCAAGTTGTATTAAGCTCAAA
ACTGGGATAATATCATCAGATGGGAGTAATGGTGATGGCCAGAATGAGGATTTCACAACT
CAGGAAGACAGCGTTTGA

Peptide Sequence

PEP ID

VIT_00s0341g00040.t01
PEP Infomation

pep chromosome:12X:Un:24409824:24415586:1 gene:VIT_00s0341g00040 transcript:VIT_00s0341g00040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKRLLQLVAVVLMYRINWKKLFVVVAIMTTAGMVLQTYTLPYPMATWFLPPQTMVSSYKS
LNGSTVHLTETLSLESAEQFQLVPTAPVVSLNSSTELVKSVPIVEERAQVSPRRNPSSRR
RRKNAKIDKTNEQKVVFHPPPPRTVPTRLQRYIWSLPPDEALLFAKREIQNVSTVTDDPE
LYASLFHNVSVFKRSYELMETILKVYIYPDGARPIFHAPHLRGIYASEGWFMKLMEENRQ
FVTRDPKKAHLFYLPYSARQLETALYVPNSHNIRPLSIFLRDHVNMIAAKYPFWNRTHGS
DHFLVACHDWGPYTVNEHQELSRNTIKALCNADLSEGIFVAGKDVSLPETTIRNPRRPLR
NVGGRRVSQRPILAFFAGNMHGRVRPTLLKYWSDKDEDMRIYGPLPNRISRKMSYIQHMK
SSRFCICPMGYEVNSPRIVEAIYYECVPVIIADNFVPPLNDVLDWTAFSVIVAEKDIPKL
KEILLAIPLRRYLVMQTNVKMVQKHFLWNPKPVRYDLFHMILHSIWFSRLNQIQISVNDT
APVALGLRLIIRKSSCIKLKTGIISSDGSNGDGQNEDFTTQEDSV

Transcript Sequence

Transcript ID

VIT_00s0341g00040.t01
Transcript Infomation

cdna chromosome:12X:Un:24409824:24415586:1 gene:VIT_00s0341g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GATAATGAGATGAAAAGGCTATTGCAGTTGGTGGCTGTTGTCCTCATGTACAGAATCAAT
TGGAAAAAACTGTTCGTTGTTGTAGCCATAATGACAACAGCTGGTATGGTACTTCAAACC
TATACACTTCCTTATCCAATGGCGACCTGGTTCCTCCCTCCACAAACGATGGTCTCTTCC
TACAAATCCTTGAATGGTAGTACCGTTCATTTGACCGAGACCCTTTCATTGGAAAGTGCC
GAGCAGTTTCAACTTGTTCCTACTGCCCCTGTTGTGTCTTTGAATTCTTCCACTGAATTG
GTTAAGTCAGTGCCAATTGTTGAAGAGAGAGCTCAAGTTTCTCCAAGGAGAAATCCTTCA
TCCAGAAGGAGAAGGAAGAACGCAAAGATTGACAAAACCAATGAGCAAAAGGTTGTATTT
CATCCGCCTCCACCTAGAACTGTGCCCACTCGCTTGCAGAGATATATTTGGTCATTGCCA
CCTGATGAGGCCCTTTTATTTGCTAAAAGGGAGATCCAGAATGTCTCAACTGTTACTGAT
GATCCTGAGCTGTATGCCTCTTTATTCCACAATGTTTCTGTTTTCAAAAGGAGTTATGAA
TTGATGGAAACCATACTTAAAGTCTACATTTACCCAGATGGAGCGAGACCCATTTTTCAT
GCACCCCATCTCAGAGGAATTTATGCTTCTGAAGGGTGGTTTATGAAGTTAATGGAGGAA
AACAGGCAGTTTGTCACAAGGGACCCAAAAAAGGCTCACTTGTTTTATCTTCCATACAGT
GCACGCCAGCTGGAGACAGCACTCTATGTGCCCAATTCACATAATATCAGACCACTGTCG
ATCTTCTTAAGGGACCATGTGAACATGATCGCAGCAAAGTATCCTTTCTGGAACCGCACA
CATGGATCAGACCATTTTTTAGTTGCTTGCCACGACTGGGGCCCTTACACAGTGAATGAA
CACCAGGAACTGAGCAGAAACACCATAAAAGCTCTTTGCAATGCTGATCTATCAGAAGGC
ATATTTGTTGCAGGGAAAGATGTTTCCCTTCCAGAAACTACCATTAGGAATCCAAGGCGC
CCTCTAAGAAATGTTGGTGGAAGACGAGTATCACAGCGTCCAATTCTTGCTTTTTTCGCT
GGAAACATGCATGGTAGGGTCCGCCCCACCCTTCTCAAGTACTGGTCTGATAAAGATGAA
GACATGAGGATTTATGGACCACTACCCAATAGAATCTCCAGAAAAATGTCCTATATTCAG
CATATGAAATCAAGCAGATTCTGCATTTGCCCAATGGGATATGAAGTGAACAGCCCCAGG
ATTGTTGAGGCAATATATTATGAGTGTGTCCCAGTGATCATAGCCGATAACTTTGTTCCT
CCACTCAACGATGTGTTGGATTGGACTGCATTTTCTGTAATTGTGGCTGAGAAGGATATA
CCCAAACTGAAGGAAATCCTTTTGGCTATTCCCCTGAGACGGTACCTTGTAATGCAAACA
AACGTGAAGATGGTGCAGAAGCATTTTCTCTGGAACCCAAAACCAGTCAGATATGATTTG
TTCCACATGATTCTGCATTCAATTTGGTTTAGTAGGTTGAACCAGATTCAAATCTCAGTG
AATGATACAGCACCAGTTGCCCTGGGACTACGTTTGATAATCAGAAAATCAAGTTGTATT
AAGCTCAAAACTGGGATAATATCATCAGATGGGAGTAATGGTGATGGCCAGAATGAGGAT
TTCACAACTCAGGAAGACAGCGTTTGAATCTTTATAGCAATTTATTGGACCAAATCCAGA
GA