Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0341g00020.t01
CDS Infomation

cds chromosome:12X:Un:24386268:24394273:-1 gene:VIT_00s0341g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGTGTATTATAAATTCAAAAGTGCAAAAGATTTTGATTCGATTCCAATCGACGGA
CACTTTATATCAATTGGAAACTTGAAAGAAAAAATTTTTGAAACAAAGCATCTGGGCAGG
GGCACTGATTTCGACCTCGTGGTCACCAACGCCCAGACTAACGAAGAGTATCTTGATGAA
GCAATGTTGATCCCAAAAAATACCTCTGTTTTGATTCGCCGGGTTCCTGGACGGCCTCGA
ATGCCCATTGTGACTGAAAAGGACGAGCCTAAAGTGGAAAATAAGGTAGATGAAGCTCAA
CCAACAAATAGTAACTTTGTGGGTGCTGATTCATCTGCCATGAAATATCCTGATGATTCA
GAGTGGGATGAATTTGGAAATGACTTATACGCCATACCTGAAGTGGTGCCAGTTCAGTCA
AGCAATCCAGTTTTGGATGCTCCTCCTCCAAGTAAAGCTGATGAAGACAGCAAGATCAAG
GCTTTAATTGATACTCCAGCCTTGGACTGGCAGCGTCAAGGCACTGATGGCTTTGGACCT
GGAAGGGGTTTTGGAAGGGGTATTGGTGGAAGAATGATGGGTGGACGTGGTTTTGGCCGG
ATTGGGTTGGAGCGGAAAACACCTCCACAAGGATACATATGTCACAGGTGCAAGGTGCCT
GGACATTTCATTCAACACTGTCCTACAAATGGGGATCCAACTTATGACATCAAAAGAGTG
AAACCCCCTACTGGCATTCCAAAGTCGATGTTAATGGCAACCCCAGATGGCTCATATGCG
TTACCAAGCGGAGCTGTTGCTGTTTTGAAACCAAATGAAGCTGCTTTTGAAAAAGAAATT
GAAGGGTTGCCTTCCACTCGTTCTGTTGGTGAACTTCCACCTGAGCTTCATTGCCCACTA
TGTAAAGAAGTGATGAAAGATGCTGTTCTAACAAGCAAATGTTGTTTCAAGAGTTTTTGT
TATAAATGTATCAGAGACCACATTATCTCAAAATCAATGTGTGTTTGTGGTGCCACAAAT
ATACTCGCAGATGATCTTCTTCCAAACAAAACCCTTAGGGATACAATCAATCGCATTCTG
GAGTCTAACAATAGTAGTGCAGAAAATGCTGGAAGTGCTTTACAAGTTCAAGATATGGAA
TCTGCTCGCTGCCCACAGCCTAAGATTCCATCCCCTACATTGTCTGCCGCATCAAAGGGA
GAGCAGATGCCACCACCTCAGATTGAAGAAACTCCGAACATAATAAAACCAGTTGCAGAT
GAGAGTAAGTCTGCTAATCCTCCACCACAGCTTCCAGAAAAAGGGAGGACAGGAAAAGCT
GCTGATGTGTCTGAAGCTACACTTGAGTCCATGAGTGTGAAGGAACTGGCTTCACAGGGA
AGTGCTCCTCTGGCTGAGGAAGAAGTGCAGCAGAAGCTTGCTTCTGGTGAGGCAGGAAAG
AAAAAGAAAAAGAAGAAAGCTCGTGTGCCTGTAAATGCAGCAGACATTCAGTGGAAGTCC
ACTCAAGATCTTGCAGCTGAGAACTATATGATGCCTATGGATCCCACATATGCTCCTTAC
TGGAATGGCATGCAGCCAGGAATGGATGGTTTTATGAACCCTTATGCTGGTGCCATGCCA
TATATGGGGTATGGTTACAATACATTAGATATGCCTTTTGGGGGTGTTCTACCTCAGGGG
CCTTTTGGGGCACCGGGTTATATGCTGCCTGTTGTTCCACCTCAGAGGGATCTGGCTGAT
TTTGGAATGGGTTTAAATGCTGCACCTCCTGTTATGAGTAGGGAGGAATTTGAGGCTAGG
AAAGCTGATCTGAGAAGGCGTCGTGAAAGTGAGCGACGAGGTGAAAGCAAAGAGTTCCCT
AAAGATCGAGAATATGGTAGAGAAGGGAGCATGGGCGGTGACGTTTCTACAATGAAACCA
AAACCCAAATTGGCTCCCCAATCATCGAGCGCCGACCACCACCACCGCCGCCCTCGACCG
GAGAGGTCATCGCCGGAGCGCCCCACCAGAGATGTAGAGGCACCGCGCCCCTCCAAGAGA
AAATCAGAGCATCACCACCACCGCCCCTCTGACTCATCCGCCCGACCTCCTCCCTCCGCG
GCCGCCGAATCATCTAGATCCTTGGCGGATCGCAAGGCAAAGCCCAGCGTCTTCTCCCGC
ATAAGCTTCCCGGAGGAAGAGCCCACCAAGAAGCGTAAGTTGTCTGAAACTCCAAGCGCC
TCGGCGATTCCAAACGGGCAACATGAGGATTGGAAAGTGTCGCCCTCTTCGGCGGCTGCG
TCGAGAAAGAGCAGTGTGACAGAGTATGAGTCAAGTGATGAGGATAGGCATTTCAAGAGA
AAGCCATCGAGGTACGAGCCGTCACCGCCAGCCCCGGCGGCGAAGGAGGCGGAGTGGGAG
GAGAAGGAGGCGAGGCACTCATCGAGGGGGTCGAGGGAGCGCGAGAGAGAGTACGATAGA
GATCGTGGTTACAGTAAGCACAGATAA

Peptide Sequence

PEP ID

VIT_00s0341g00020.t01
PEP Infomation

pep chromosome:12X:Un:24386268:24394273:-1 gene:VIT_00s0341g00020 transcript:VIT_00s0341g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAVYYKFKSAKDFDSIPIDGHFISIGNLKEKIFETKHLGRGTDFDLVVTNAQTNEEYLDE
AMLIPKNTSVLIRRVPGRPRMPIVTEKDEPKVENKVDEAQPTNSNFVGADSSAMKYPDDS
EWDEFGNDLYAIPEVVPVQSSNPVLDAPPPSKADEDSKIKALIDTPALDWQRQGTDGFGP
GRGFGRGIGGRMMGGRGFGRIGLERKTPPQGYICHRCKVPGHFIQHCPTNGDPTYDIKRV
KPPTGIPKSMLMATPDGSYALPSGAVAVLKPNEAAFEKEIEGLPSTRSVGELPPELHCPL
CKEVMKDAVLTSKCCFKSFCYKCIRDHIISKSMCVCGATNILADDLLPNKTLRDTINRIL
ESNNSSAENAGSALQVQDMESARCPQPKIPSPTLSAASKGEQMPPPQIEETPNIIKPVAD
ESKSANPPPQLPEKGRTGKAADVSEATLESMSVKELASQGSAPLAEEEVQQKLASGEAGK
KKKKKKARVPVNAADIQWKSTQDLAAENYMMPMDPTYAPYWNGMQPGMDGFMNPYAGAMP
YMGYGYNTLDMPFGGVLPQGPFGAPGYMLPVVPPQRDLADFGMGLNAAPPVMSREEFEAR
KADLRRRRESERRGESKEFPKDREYGREGSMGGDVSTMKPKPKLAPQSSSADHHHRRPRP
ERSSPERPTRDVEAPRPSKRKSEHHHHRPSDSSARPPPSAAAESSRSLADRKAKPSVFSR
ISFPEEEPTKKRKLSETPSASAIPNGQHEDWKVSPSSAAASRKSSVTEYESSDEDRHFKR
KPSRYEPSPPAPAAKEAEWEEKEARHSSRGSREREREYDRDRGYSKHR

Transcript Sequence

Transcript ID

VIT_00s0341g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:24386268:24394273:-1 gene:VIT_00s0341g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCGAAGCGAAAAGAGGGCAAGATTATCAGAATCAAGAAAAAGGCAAGAAACCCTTGAAAA
AGCTTCCAAGCAGCAGGAAGAAGAAGGCGGCCAAGAAGAGAGAGCGAGGGCTTACCCGGA
GATTCAATGTCTCTTCATTGAGACGCATACTTTCGTGCTCTTTTTCACCGATCGCCTTTC
AAGATCGGCGTTTCTAACGTTTCCGCCGTTCCGATCCGCTCCCCGGCTGAAATTTCACCT
GATCGAAGAATCGGGGCGATAGATCGATCCAAGGAGGTGTTTCGGCTTGTTATCGGCGCG
ATTTGTGGCCTGGAATAGGAGAAATCTTGGCTCCTAAGAGAGATCTTGTTGCGTTGCGCG
ATTCGAAGAAGAGGATCTTGATTTCAAGAGTTGTTGATGGGGTTTGTTGCGTCGGTTTGA
TCTTTCTCCGAGAGAAATTGCAAAAAGAAGAGATATATTTTTGTACTTTAATTGAGTTCA
ATAACAGGCCTTTTGTGGTTTTTTTGTTGATTATCAAAGGGCCTTTTGAACTTAAGAGTT
TTTTTTTTTGTTTGATTTATCCAAATTTTAGAGGGAAAGAACTGAGAAAGAAAAAGAATG
GCAGTGTATTATAAATTCAAAAGTGCAAAAGATTTTGATTCGATTCCAATCGACGGACAC
TTTATATCAATTGGAAACTTGAAAGAAAAAATTTTTGAAACAAAGCATCTGGGCAGGGGC
ACTGATTTCGACCTCGTGGTCACCAACGCCCAGACTAACGAAGAGTATCTTGATGAAGCA
ATGTTGATCCCAAAAAATACCTCTGTTTTGATTCGCCGGGTTCCTGGACGGCCTCGAATG
CCCATTGTGACTGAAAAGGACGAGCCTAAAGTGGAAAATAAGGTAGATGAAGCTCAACCA
ACAAATAGTAACTTTGTGGGTGCTGATTCATCTGCCATGAAATATCCTGATGATTCAGAG
TGGGATGAATTTGGAAATGACTTATACGCCATACCTGAAGTGGTGCCAGTTCAGTCAAGC
AATCCAGTTTTGGATGCTCCTCCTCCAAGTAAAGCTGATGAAGACAGCAAGATCAAGGCT
TTAATTGATACTCCAGCCTTGGACTGGCAGCGTCAAGGCACTGATGGCTTTGGACCTGGA
AGGGGTTTTGGAAGGGGTATTGGTGGAAGAATGATGGGTGGACGTGGTTTTGGCCGGATT
GGGTTGGAGCGGAAAACACCTCCACAAGGATACATATGTCACAGGTGCAAGGTGCCTGGA
CATTTCATTCAACACTGTCCTACAAATGGGGATCCAACTTATGACATCAAAAGAGTGAAA
CCCCCTACTGGCATTCCAAAGTCGATGTTAATGGCAACCCCAGATGGCTCATATGCGTTA
CCAAGCGGAGCTGTTGCTGTTTTGAAACCAAATGAAGCTGCTTTTGAAAAAGAAATTGAA
GGGTTGCCTTCCACTCGTTCTGTTGGTGAACTTCCACCTGAGCTTCATTGCCCACTATGT
AAAGAAGTGATGAAAGATGCTGTTCTAACAAGCAAATGTTGTTTCAAGAGTTTTTGTTAT
AAATGTATCAGAGACCACATTATCTCAAAATCAATGTGTGTTTGTGGTGCCACAAATATA
CTCGCAGATGATCTTCTTCCAAACAAAACCCTTAGGGATACAATCAATCGCATTCTGGAG
TCTAACAATAGTAGTGCAGAAAATGCTGGAAGTGCTTTACAAGTTCAAGATATGGAATCT
GCTCGCTGCCCACAGCCTAAGATTCCATCCCCTACATTGTCTGCCGCATCAAAGGGAGAG
CAGATGCCACCACCTCAGATTGAAGAAACTCCGAACATAATAAAACCAGTTGCAGATGAG
AGTAAGTCTGCTAATCCTCCACCACAGCTTCCAGAAAAAGGGAGGACAGGAAAAGCTGCT
GATGTGTCTGAAGCTACACTTGAGTCCATGAGTGTGAAGGAACTGGCTTCACAGGGAAGT
GCTCCTCTGGCTGAGGAAGAAGTGCAGCAGAAGCTTGCTTCTGGTGAGGCAGGAAAGAAA
AAGAAAAAGAAGAAAGCTCGTGTGCCTGTAAATGCAGCAGACATTCAGTGGAAGTCCACT
CAAGATCTTGCAGCTGAGAACTATATGATGCCTATGGATCCCACATATGCTCCTTACTGG
AATGGCATGCAGCCAGGAATGGATGGTTTTATGAACCCTTATGCTGGTGCCATGCCATAT
ATGGGGTATGGTTACAATACATTAGATATGCCTTTTGGGGGTGTTCTACCTCAGGGGCCT
TTTGGGGCACCGGGTTATATGCTGCCTGTTGTTCCACCTCAGAGGGATCTGGCTGATTTT
GGAATGGGTTTAAATGCTGCACCTCCTGTTATGAGTAGGGAGGAATTTGAGGCTAGGAAA
GCTGATCTGAGAAGGCGTCGTGAAAGTGAGCGACGAGGTGAAAGCAAAGAGTTCCCTAAA
GATCGAGAATATGGTAGAGAAGGGAGCATGGGCGGTGACGTTTCTACAATGAAACCAAAA
CCCAAATTGGCTCCCCAATCATCGAGCGCCGACCACCACCACCGCCGCCCTCGACCGGAG
AGGTCATCGCCGGAGCGCCCCACCAGAGATGTAGAGGCACCGCGCCCCTCCAAGAGAAAA
TCAGAGCATCACCACCACCGCCCCTCTGACTCATCCGCCCGACCTCCTCCCTCCGCGGCC
GCCGAATCATCTAGATCCTTGGCGGATCGCAAGGCAAAGCCCAGCGTCTTCTCCCGCATA
AGCTTCCCGGAGGAAGAGCCCACCAAGAAGCGTAAGTTGTCTGAAACTCCAAGCGCCTCG
GCGATTCCAAACGGGCAACATGAGGATTGGAAAGTGTCGCCCTCTTCGGCGGCTGCGTCG
AGAAAGAGCAGTGTGACAGAGTATGAGTCAAGTGATGAGGATAGGCATTTCAAGAGAAAG
CCATCGAGGTACGAGCCGTCACCGCCAGCCCCGGCGGCGAAGGAGGCGGAGTGGGAGGAG
AAGGAGGCGAGGCACTCATCGAGGGGGTCGAGGGAGCGCGAGAGAGAGTACGATAGAGAT
CGTGGTTACAGTAAGCACAGATAAAGAAGAGGGTAGAGAAATTGGGGATGTGAGATGAGT
GAGGAGTGATGAGGAAGTCTTTGGTCTCTTGCGCTTCATGGAAAGATGGGAGACTTGATT
TTATATGACTTGAAATATGACTCTGTATTCACCCTTTCTTTTTTTAATATAAATAATTTC
ATCTTTTTCAAC