Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0337g00080.t01
CDS Infomation

cds chromosome:12X:Un:24083888:24092821:1 gene:VIT_00s0337g00080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGTGGAAGAGCTCGCTGTACTCTCAGACCAGACAACATCGCCCGAGCATGCAACCTC
AATACCCTCCCAACTCAGAATATCCAAATGGACCGGTATCGGCCGTCGTATAATGTGTCA
CCGGGGGCGAATCTGCCAGTGGTTCGGAGAGGGGGCGGGACTGAGGGCGAAGAGGCCATT
GTTCATTGCATGAAGTGGGGGCTTGTTCCTAGCTTCACCAAGAAATCTGAGAAACCTGAT
CATTACAAGATGTTCAATGCTCGGTCTGAGTCAGTATGTGAAAAGGCTTCTTTTCGGCGT
TTAGTTCCTAAGAACCGGTGCCTTGTGGCGGTAGAAGGATTCTATGAGTGGAAAAAGGAT
GGCTCAAAAAAGCAACCTTACTACATTCATCTGAAGGATGGACGACCTCTTGTTTTTGCT
GCTCTTTTTGATTCATGGGCAAATTCTGAAGGAGAGATTCTCTATACTTGTACAATCCTG
ACGACTTCTTCATCATCTGCCTTACAATGGTTGCATGATAGGATGCCTGTTATTTTGGGT
GACAAGGAGTCAACTGATGCGTGGCTAAATGGTTCTTCATCTTCCCAATTTAATACGGTC
CTCAAACCATATGAAGATCCAGATTTGGTATGGTACCCGGTGACACAGGCAATGGGCAAG
CCATCTTTCGAGGGACCAGAGTGCATCAAGGAGATTCAGTTAAAGAACGAGCAGAGGCCC
ATCTCAAAGTTTTTCTCAACAAAGGGAATAAAAAATGAACAGGGTTTGTCTAATGAACCC
GTCAAGTCAAATCTGCCACAAAGCTTGAAAGAAGAACCCGCCATCGAGAACAGCACAGGA
CTTCCATCCTCTACTGTTAAAGGTGACCATGATTCAACATGTAGTCGTTCAATTCCTCAG
GAGGAGTCTACATGGTTCACAAATCTGCCAAAGAGCTTGAAACAGGAACCTGAAACAGAA
GACAAAACAGGACTTCCATTTCCAGGTGACCATGATTCAAAATGTGATGAAGAAGCTACA
AAGCTCCCCATAAAGCGGGACTTCGAGGAGTTCTCTGCTGATTCAAAACCAAACACTGAC
ACAGTTGAGAAGCCAAGTCCTGTGACAAAGAAGGGAAAACTTAATAAGAATGCAGGTGAC
AAACAACCAACACTGTTTTCTTACTTCGGAAAAAGCTAG

Peptide Sequence

PEP ID

VIT_00s0337g00080.t01
PEP Infomation

pep chromosome:12X:Un:24083888:24092821:1 gene:VIT_00s0337g00080 transcript:VIT_00s0337g00080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MCGRARCTLRPDNIARACNLNTLPTQNIQMDRYRPSYNVSPGANLPVVRRGGGTEGEEAI
VHCMKWGLVPSFTKKSEKPDHYKMFNARSESVCEKASFRRLVPKNRCLVAVEGFYEWKKD
GSKKQPYYIHLKDGRPLVFAALFDSWANSEGEILYTCTILTTSSSSALQWLHDRMPVILG
DKESTDAWLNGSSSSQFNTVLKPYEDPDLVWYPVTQAMGKPSFEGPECIKEIQLKNEQRP
ISKFFSTKGIKNEQGLSNEPVKSNLPQSLKEEPAIENSTGLPSSTVKGDHDSTCSRSIPQ
EESTWFTNLPKSLKQEPETEDKTGLPFPGDHDSKCDEEATKLPIKRDFEEFSADSKPNTD
TVEKPSPVTKKGKLNKNAGDKQPTLFSYFGKS

Transcript Sequence

Transcript ID

VIT_00s0337g00080.t01
Transcript Infomation

cdna chromosome:12X:Un:24083888:24092821:1 gene:VIT_00s0337g00080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGTGGAAGAGCTCGCTGTACTCTCAGACCAGACAACATCGCCCGAGCATGCAACCTC
AATACCCTCCCAACTCAGAATATCCAAATGGACCGGTATCGGCCGTCGTATAATGTGTCA
CCGGGGGCGAATCTGCCAGTGGTTCGGAGAGGGGGCGGGACTGAGGGCGAAGAGGCCATT
GTTCATTGCATGAAGTGGGGGCTTGTTCCTAGCTTCACCAAGAAATCTGAGAAACCTGAT
CATTACAAGATGTTCAATGCTCGGTCTGAGTCAGTATGTGAAAAGGCTTCTTTTCGGCGT
TTAGTTCCTAAGAACCGGTGCCTTGTGGCGGTAGAAGGATTCTATGAGTGGAAAAAGGAT
GGCTCAAAAAAGCAACCTTACTACATTCATCTGAAGGATGGACGACCTCTTGTTTTTGCT
GCTCTTTTTGATTCATGGGCAAATTCTGAAGGAGAGATTCTCTATACTTGTACAATCCTG
ACGACTTCTTCATCATCTGCCTTACAATGGTTGCATGATAGGATGCCTGTTATTTTGGGT
GACAAGGAGTCAACTGATGCGTGGCTAAATGGTTCTTCATCTTCCCAATTTAATACGGTC
CTCAAACCATATGAAGATCCAGATTTGGTATGGTACCCGGTGACACAGGCAATGGGCAAG
CCATCTTTCGAGGGACCAGAGTGCATCAAGGAGATTCAGTTAAAGAACGAGCAGAGGCCC
ATCTCAAAGTTTTTCTCAACAAAGGGAATAAAAAATGAACAGGGTTTGTCTAATGAACCC
GTCAAGTCAAATCTGCCACAAAGCTTGAAAGAAGAACCCGCCATCGAGAACAGCACAGGA
CTTCCATCCTCTACTGTTAAAGGTGACCATGATTCAACATGTAGTCGTTCAATTCCTCAG
GAGGAGTCTACATGGTTCACAAATCTGCCAAAGAGCTTGAAACAGGAACCTGAAACAGAA
GACAAAACAGGACTTCCATTTCCAGGTGACCATGATTCAAAATGTGATGAAGAAGCTACA
AAGCTCCCCATAAAGCGGGACTTCGAGGAGTTCTCTGCTGATTCAAAACCAAACACTGAC
ACAGTTGAGAAGCCAAGTCCTGTGACAAAGAAGGGAAAACTTAATAAGAATGCAGGTGAC
AAACAACCAACACTGTTTTCTTACTTCGGAAAAAGCTAGAGCAGTATGATATGGACTACT
TGTTTCTTGCGAGACTATATGTGATATGGACTTTTTGTTGAGACTAGGACACCTTTTTGT
AAATGAAACCTTGTTTTTGTTGGATCATGTTAACTCAAATGTCTAAATGTGAATTCTTTT
AACTCTTTCAGTATTCAAAAGTTATTTTATTTTTAATT