Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0324g00030.t01
CDS Infomation

cds chromosome:12X:Un:23401044:23402612:-1 gene:VIT_00s0324g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAACAGCTTCTTTGTTTCATCTTCTTCCACATCTTCATCATAGTTTTGGCACTCCAG
CTCGCGTTAGCGTCAGACCCTGCATGTCGTGACACGTGCGGCTCTCTCTCCGTGAAGTTC
CCCTTCGGCACCGGCGTCGGCTGCGGCTCGCCGAGGTTTCAGCCTTACATATCTTGTTCG
CAGTCGTCTGACGGCGGAGATCAGCTCCTCTTGAGAACCCACACCGGTGTTTACCCGATA
ACCTCCATATCATATGAAGCTGCCGCCTTCACCGTCACACCGCCACTCATGTCCAACTGC
ACCTCCATGCAGCCGTCGCCGAATCTGGGCCTCGATTGGGCGAGCCCCTTCCAGCTGGGC
CCATCGGCATTCATCCTCCTCTCCTGCCCTCCGTCACTCACCTCCAAAGCTTCGCCGCCC
ATCTGCGATCCTTCTCTCTCTCACCTCTGCGCCTCCATCTACACCTGTCCCTCCGTCGTC
TCTCTGGGCTTGCCTCTGTTTCCCCCCACCAACAGCTGCTGCGTCTACTCCCCGGCCAAC
TTCAACACCAAGGGTGAACTAGACCTCCATGCCCTCAAGTGTGCCGCTTACGCGTCGGTC
GTGACGTTGGGTGATTACCCGACCGATCCTACCCGGTGGGAGTATGGAGTGGTGTTCAAG
TATACGCAGGGGAAGTTTGATAATTACGGCATGGACACTAAGTGTTACGCTTGTGATAGC
AGCGGAGGTGTGTGTGGATACGCTCCTCCGAGTAATTCCTTCGTCTGCGTTTGTGGGAAT
GGTTTCAATACTAGCTCCAATTGCAATGGCTACAGTTTCGCTGGGATTTGGAGCTCCGGT
TCTCGACCCACCCGGAAGGCTTGGTGGGGGATTTTGGCTTGGTTGGTGTTTTGGCTAGTC
TGA

Peptide Sequence

PEP ID

VIT_00s0324g00030.t01
PEP Infomation

pep chromosome:12X:Un:23401044:23402612:-1 gene:VIT_00s0324g00030 transcript:VIT_00s0324g00030.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEQLLCFIFFHIFIIVLALQLALASDPACRDTCGSLSVKFPFGTGVGCGSPRFQPYISCS
QSSDGGDQLLLRTHTGVYPITSISYEAAAFTVTPPLMSNCTSMQPSPNLGLDWASPFQLG
PSAFILLSCPPSLTSKASPPICDPSLSHLCASIYTCPSVVSLGLPLFPPTNSCCVYSPAN
FNTKGELDLHALKCAAYASVVTLGDYPTDPTRWEYGVVFKYTQGKFDNYGMDTKCYACDS
SGGVCGYAPPSNSFVCVCGNGFNTSSNCNGYSFAGIWSSGSRPTRKAWWGILAWLVFWLV

Transcript Sequence

Transcript ID

VIT_00s0324g00030.t01
Transcript Infomation

cdna chromosome:12X:Un:23401044:23402612:-1 gene:VIT_00s0324g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGGATTATTGCTGAAAGCTGTTGCAGTAAAGGTGTGCAAACGTTTGTTCACGCTAAAGC
TTGAGGGGGGTACAAAACAAACGGAGAAGCTCCTTGGTGATAATGTTCGACTTTGTGTAT
CATTAGAGAGAGAGAGAGAGTGACAGAGAGACTCGGGTAATGGAACAGCTTCTTTGTTTC
ATCTTCTTCCACATCTTCATCATAGTTTTGGCACTCCAGCTCGCGTTAGCGTCAGACCCT
GCATGTCGTGACACGTGCGGCTCTCTCTCCGTGAAGTTCCCCTTCGGCACCGGCGTCGGC
TGCGGCTCGCCGAGGTTTCAGCCTTACATATCTTGTTCGCAGTCGTCTGACGGCGGAGAT
CAGCTCCTCTTGAGAACCCACACCGGTGTTTACCCGATAACCTCCATATCATATGAAGCT
GCCGCCTTCACCGTCACACCGCCACTCATGTCCAACTGCACCTCCATGCAGCCGTCGCCG
AATCTGGGCCTCGATTGGGCGAGCCCCTTCCAGCTGGGCCCATCGGCATTCATCCTCCTC
TCCTGCCCTCCGTCACTCACCTCCAAAGCTTCGCCGCCCATCTGCGATCCTTCTCTCTCT
CACCTCTGCGCCTCCATCTACACCTGTCCCTCCGTCGTCTCTCTGGGCTTGCCTCTGTTT
CCCCCCACCAACAGCTGCTGCGTCTACTCCCCGGCCAACTTCAACACCAAGGGTGAACTA
GACCTCCATGCCCTCAAGTGTGCCGCTTACGCGTCGGTCGTGACGTTGGGTGATTACCCG
ACCGATCCTACCCGGTGGGAGTATGGAGTGGTGTTCAAGTATACGCAGGGGAAGTTTGAT
AATTACGGCATGGACACTAAGTGTTACGCTTGTGATAGCAGCGGAGGTGTGTGTGGATAC
GCTCCTCCGAGTAATTCCTTCGTCTGCGTTTGTGGGAATGGTTTCAATACTAGCTCCAAT
TGCAATGGCTACAGTTTCGCTGGGATTTGGAGCTCCGGTTCTCGACCCACCCGGAAGGCT
TGGTGGGGGATTTTGGCTTGGTTGGTGTTTTGGCTAGTCTGACTATCGGTATGCCAACTT
GAGCGAAGATGTGTATATAGTATAGACCATTGAGCAGACTGCAGAGTTGTACTCCTAGTC
TCCTAGAGCCGATGCTACCTAGCCTTCTTTTTCTTCTTTGGTTTTATTCTGCATTGTATT
TTTGTATTTTATTTTCTTTCAAGTTTTAATGGGATTCTGTTGAGCTTTTGATTTGGAAAA
GGTGAGGAACGAATAAAGGTGGCAATGCACT