Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0323g00100.t01
CDS Infomation

cds chromosome:12X:Un:23374306:23377586:1 gene:VIT_00s0323g00100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCACCTTACACCGCTTCATCACTTCAACCGTCCCACTTTAAATCTCACGCTCTGCAC
GCCACCCCTTCCAAACACTTCAGTCTCTCTATGGCTCTGCATCGATCTGTTTGCCTCCTG
AACTCAGCGCTCCTGCTGCTGTTGCTGTTACTTGCTGAAGGTACTGGGGGCGCTCGAGCT
TTAAGGCTGAACCGGTGGGATCAGAAGATATGGATGCCAACTGATAAGGTTGAAGCGGAA
GAGGATGGTGAAGAAAGGGGCACGAGGTGGGCGGTTCTCGTGGCAGGCTCATATGGATAC
GGAAATTACAGGCACCAGGCTGATGTGTGCCATGCTTATCAGTTGCTGAAAAGAGGAGGG
CTGAAGGATGAGAACATAGTGGTGTTTATGTACGATGATATTGCCACTCATGATTTCAAT
CCCAGGCCCGGCGTAATAATCAATCATCCGCAAGGTGATGATGTGTATGCTGGTGTACCT
AAGGATTACACTGGCGAGGATGTTACTGCACAGAATTTATTTGCAGTACTCCTTGGTGAC
AAGAGCTTATTGAAAGGTGGAAGTGGAAAGGTTGTAGAGAGCAAACCCAACGACAGAATC
TTTCTATACTACTCGGATCATGGAGGCCAGGGAGTGCTGGGGATGCCAAATATGCCTTTT
CTCTATGCAAAGGATTTTATCGACGTTTTAAAGATGAAGCATGCATCTGGAAGCTACAAA
GAAATGGTTCTATATGTAGAAGCATGTGAAAGTGGGAGTATTTTTGAAGGTCTGATGCCT
GATGATTTAAACATTTATGTCACAACTGCATCCGGCCCGGATGAGGAGAGCTGGGGCACC
TATTGTCCTGGTATGGAACCCGCACCACCTCCGGAGTACATAACTTGCTTAGGAGATTTG
TTCAGTGTTGCCTGGTTGGAAGACAGTGAGACACACAACCTAAAGAAACAAACAATAGAG
GACCAATACCAGAGGGTTAAGGTTCGGACTTCCAATCACAACACCTATAGCGTTGGATCA
CATGTTATGGTATATGGCAATGAAAGCATCAAGACAGAGCTGCTCTATCTGTACCAAGGT
TTTGATCCGGCCACTGACAAACTCCCTCAAAACAAATTCGACCTTGATATCCGCATGGAT
GTAATTAACCAGAGAGACGCCGATCTTCTCTTCTTGTGGCAAAGGTACAAAAGATCAAAA
GCTGATTCGGAAAAGAAAGAAATTCTCAAGCAGCTTACGCAGACAATGCAGCATAGAGTT
CACTTAGACCAGAGTATTGAACTGATTGGGATGCTTCTACTTGGACCGGAAAACGGTCCT
CCTCTTCTCAATGCCGTAAGACCACGCGGTTTGCCGGTTGTTGATGACTGGGAATGCTTG
AAATCGATGGTGGTGGTGTTTGAGACTCGCTGCGGATCACTGACTCAATATGGCATGAAA
CATATGAGGGCTTTCGCCAATATATGCAATAATGGAATCTCGCTAACTGCCATGGAGGAA
GCTTGTAGAAGTGCCTGCAGCAGCCATACCATTCTGGACCAATGGAGCCCTACAATCAGA
GGTTATAGTGCTTGA

Peptide Sequence

PEP ID

VIT_00s0323g00100.t01
PEP Infomation

pep chromosome:12X:Un:23374306:23377586:1 gene:VIT_00s0323g00100 transcript:VIT_00s0323g00100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSPYTASSLQPSHFKSHALHATPSKHFSLSMALHRSVCLLNSALLLLLLLLAEGTGGARA
LRLNRWDQKIWMPTDKVEAEEDGEERGTRWAVLVAGSYGYGNYRHQADVCHAYQLLKRGG
LKDENIVVFMYDDIATHDFNPRPGVIINHPQGDDVYAGVPKDYTGEDVTAQNLFAVLLGD
KSLLKGGSGKVVESKPNDRIFLYYSDHGGQGVLGMPNMPFLYAKDFIDVLKMKHASGSYK
EMVLYVEACESGSIFEGLMPDDLNIYVTTASGPDEESWGTYCPGMEPAPPPEYITCLGDL
FSVAWLEDSETHNLKKQTIEDQYQRVKVRTSNHNTYSVGSHVMVYGNESIKTELLYLYQG
FDPATDKLPQNKFDLDIRMDVINQRDADLLFLWQRYKRSKADSEKKEILKQLTQTMQHRV
HLDQSIELIGMLLLGPENGPPLLNAVRPRGLPVVDDWECLKSMVVVFETRCGSLTQYGMK
HMRAFANICNNGISLTAMEEACRSACSSHTILDQWSPTIRGYSA

Transcript Sequence

Transcript ID

VIT_00s0323g00100.t01
Transcript Infomation

cdna chromosome:12X:Un:23374306:23377586:1 gene:VIT_00s0323g00100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTCAACACAAAAAGTCATCATCTTGGACCTCATGGTCATGGCCGGAAACAAATCTGTACA
ATATTTCTTGCCGTTGCGACACAGAAAATTTAATTTTTCAAGGTATAAAGGCGGCGTAAA
TTATGAACAAAATGACATAAAGCCAACGCCCGCTCGCTTCTGGTAGTGACACGAACCACC
TGAGGACCCACAAATCTGAACCTTTATGCATGCGTGTCACGCACCTGTTTTGCATGTCAC
CTTACACCGCTTCATCACTTCAACCGTCCCACTTTAAATCTCACGCTCTGCACGCCACCC
CTTCCAAACACTTCAGTCTCTCTATGGCTCTGCATCGATCTGTTTGCCTCCTGAACTCAG
CGCTCCTGCTGCTGTTGCTGTTACTTGCTGAAGGTACTGGGGGCGCTCGAGCTTTAAGGC
TGAACCGGTGGGATCAGAAGATATGGATGCCAACTGATAAGGTTGAAGCGGAAGAGGATG
GTGAAGAAAGGGGCACGAGGTGGGCGGTTCTCGTGGCAGGCTCATATGGATACGGAAATT
ACAGGCACCAGGCTGATGTGTGCCATGCTTATCAGTTGCTGAAAAGAGGAGGGCTGAAGG
ATGAGAACATAGTGGTGTTTATGTACGATGATATTGCCACTCATGATTTCAATCCCAGGC
CCGGCGTAATAATCAATCATCCGCAAGGTGATGATGTGTATGCTGGTGTACCTAAGGATT
ACACTGGCGAGGATGTTACTGCACAGAATTTATTTGCAGTACTCCTTGGTGACAAGAGCT
TATTGAAAGGTGGAAGTGGAAAGGTTGTAGAGAGCAAACCCAACGACAGAATCTTTCTAT
ACTACTCGGATCATGGAGGCCAGGGAGTGCTGGGGATGCCAAATATGCCTTTTCTCTATG
CAAAGGATTTTATCGACGTTTTAAAGATGAAGCATGCATCTGGAAGCTACAAAGAAATGG
TTCTATATGTAGAAGCATGTGAAAGTGGGAGTATTTTTGAAGGTCTGATGCCTGATGATT
TAAACATTTATGTCACAACTGCATCCGGCCCGGATGAGGAGAGCTGGGGCACCTATTGTC
CTGGTATGGAACCCGCACCACCTCCGGAGTACATAACTTGCTTAGGAGATTTGTTCAGTG
TTGCCTGGTTGGAAGACAGTGAGACACACAACCTAAAGAAACAAACAATAGAGGACCAAT
ACCAGAGGGTTAAGGTTCGGACTTCCAATCACAACACCTATAGCGTTGGATCACATGTTA
TGGTATATGGCAATGAAAGCATCAAGACAGAGCTGCTCTATCTGTACCAAGGTTTTGATC
CGGCCACTGACAAACTCCCTCAAAACAAATTCGACCTTGATATCCGCATGGATGTAATTA
ACCAGAGAGACGCCGATCTTCTCTTCTTGTGGCAAAGGTACAAAAGATCAAAAGCTGATT
CGGAAAAGAAAGAAATTCTCAAGCAGCTTACGCAGACAATGCAGCATAGAGTTCACTTAG
ACCAGAGTATTGAACTGATTGGGATGCTTCTACTTGGACCGGAAAACGGTCCTCCTCTTC
TCAATGCCGTAAGACCACGCGGTTTGCCGGTTGTTGATGACTGGGAATGCTTGAAATCGA
TGGTGGTGGTGTTTGAGACTCGCTGCGGATCACTGACTCAATATGGCATGAAACATATGA
GGGCTTTCGCCAATATATGCAATAATGGAATCTCGCTAACTGCCATGGAGGAAGCTTGTA
GAAGTGCCTGCAGCAGCCATACCATTCTGGACCAATGGAGCCCTACAATCAGAGGTTATA
GTGCTTGATATTGTAGCAAAAATGACCTACTTTAAGATGTGGTGTTCATGTACTCAACAG
CAGTTTAATGTTATCAACTTATAAAGCTCAATTTGGACCGATCCTCAGGCCCAAATCTCT
CTACGTTTCTAAACTTTTTACTTGTGAGTTGTGAAAAGGTCATTTTCAGAGATGTAGAAA
TGACATCTTAGCACCTATTGGGTACGTAACGAGATGGGCACGTGGACAATTCCTGGTCA