Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0317g00160.t01
CDS Infomation

cds chromosome:12X:Un:23071178:23072458:1 gene:VIT_00s0317g00160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAACAGTGAGTTTTGTGGCGAAATTATCAAGAGAAACAAGAATCTTGGTCACCAGGAG
TACAAGTTTCTCCTCCGAGCCATTGTGAGCTCCAGCATTGGTGAAGAAACTTATGGCCCA
CGAACTATCATCGATGGCAGAGAAGACTGTCCATGTCTGATGGATGGGATCCAAGAAATG
GAAGAGTTCTTCTACAAAACCCTTGATAATCTCTTCGAAAAGTCTGGCATTTCCCCATTA
GATGTGGATGTGTTAGTGGTAAATGTATCAATGCTTGCATCGGTTCCTTCCTGGTCCTCC
CGAATAATCAACCATTACAAGATGAGGAACGACATCAAGGCCTTCAACCTCTCGGGAATG
GGCTGCAGTGCAAGCTTAATATCCATTGATCTAGTCCGCAGAATCTTCAATTCTCGCAAG
AATTCACTGGCCATTGTTGTTACCTCCGAGTCCATTGCTCCGAACTGGTACTCCGGCAAC
GACAAGTCCATGATCCTCTCCAACTGCCTCTTCCGATCAGGCGGGTGTTCGATCCTCCTA
ACAAACAATAAAGCCTTAAAAGACCAGTCACTTCTAAAACTGAAGTGTTTGATTCGAACT
CATATGGGCTCAAGCGATGAAGCGCACAGCTGCTGCATGCAGAAGGAAGATGACCTCGGC
CGCAAAGGCTTTCACCTCAGCAAGAGCGTCCCCAAGGCTGCAAATCAAGCTTTTACCGAA
AACATTCGAGAACTCGCACCCAAGGCGCTTCCCTTAAGAGAACTTCTTCGTTACACTGCT
GTATCTACATTTTTTCACTACACAAAGGGAGGATTCAAAGCGAAGTTGAATTTCAAGACG
GGTGTAGATCATTTCTGCTTGCACCCGGGTGGAACGGCAATGATAGATGGAGTTGCGAAG
AGCTTGGAGCTGAGTGAGAGTGATATGGAGCCTGCTAGAATGACACTGCATCGATTTGGG
AACACTTCTGCGAGTAGTGTGTGGTATGTTTTGGGGTACATGGAGGCGAAGAAGAGGCTG
AAGAAGGGGGATAGGGTTTTGATGATCAGTTTTGGTGCTGGGTTCAAGTGCAATAGCTGT
ATGTGGGACGTGGTGAGAGATTTAGAAGACGGAAATGTTTGGGAAGACTGTGTTTCACTA
TATCCTCCTAAAACCCTAGCCAACCCTTTCATGGAGAAGTATGGTTGGATTTATCAAGAG
GATCCAACCACCAGAGGTTGGAGTTCATGGTAA

Peptide Sequence

PEP ID

VIT_00s0317g00160.t01
PEP Infomation

pep chromosome:12X:Un:23071178:23072458:1 gene:VIT_00s0317g00160 transcript:VIT_00s0317g00160.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNSEFCGEIIKRNKNLGHQEYKFLLRAIVSSSIGEETYGPRTIIDGREDCPCLMDGIQEM
EEFFYKTLDNLFEKSGISPLDVDVLVVNVSMLASVPSWSSRIINHYKMRNDIKAFNLSGM
GCSASLISIDLVRRIFNSRKNSLAIVVTSESIAPNWYSGNDKSMILSNCLFRSGGCSILL
TNNKALKDQSLLKLKCLIRTHMGSSDEAHSCCMQKEDDLGRKGFHLSKSVPKAANQAFTE
NIRELAPKALPLRELLRYTAVSTFFHYTKGGFKAKLNFKTGVDHFCLHPGGTAMIDGVAK
SLELSESDMEPARMTLHRFGNTSASSVWYVLGYMEAKKRLKKGDRVLMISFGAGFKCNSC
MWDVVRDLEDGNVWEDCVSLYPPKTLANPFMEKYGWIYQEDPTTRGWSSW

Transcript Sequence

Transcript ID

VIT_00s0317g00160.t01
Transcript Infomation

cdna chromosome:12X:Un:23071178:23072458:1 gene:VIT_00s0317g00160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGCTATATTCTGCATTACGAGTGCTTTAAGCCATCCGATGAACGCAAAATGAACAGTGAG
TTTTGTGGCGAAATTATCAAGAGAAACAAGAATCTTGGTCACCAGGAGTACAAGTTTCTC
CTCCGAGCCATTGTGAGCTCCAGCATTGGTGAAGAAACTTATGGCCCACGAACTATCATC
GATGGCAGAGAAGACTGTCCATGTCTGATGGATGGGATCCAAGAAATGGAAGAGTTCTTC
TACAAAACCCTTGATAATCTCTTCGAAAAGTCTGGCATTTCCCCATTAGATGTGGATGTG
TTAGTGGTAAATGTATCAATGCTTGCATCGGTTCCTTCCTGGTCCTCCCGAATAATCAAC
CATTACAAGATGAGGAACGACATCAAGGCCTTCAACCTCTCGGGAATGGGCTGCAGTGCA
AGCTTAATATCCATTGATCTAGTCCGCAGAATCTTCAATTCTCGCAAGAATTCACTGGCC
ATTGTTGTTACCTCCGAGTCCATTGCTCCGAACTGGTACTCCGGCAACGACAAGTCCATG
ATCCTCTCCAACTGCCTCTTCCGATCAGGCGGGTGTTCGATCCTCCTAACAAACAATAAA
GCCTTAAAAGACCAGTCACTTCTAAAACTGAAGTGTTTGATTCGAACTCATATGGGCTCA
AGCGATGAAGCGCACAGCTGCTGCATGCAGAAGGAAGATGACCTCGGCCGCAAAGGCTTT
CACCTCAGCAAGAGCGTCCCCAAGGCTGCAAATCAAGCTTTTACCGAAAACATTCGAGAA
CTCGCACCCAAGGCGCTTCCCTTAAGAGAACTTCTTCGTTACACTGCTGTATCTACATTT
TTTCACTACACAAAGGGAGGATTCAAAGCGAAGTTGAATTTCAAGACGGGTGTAGATCAT
TTCTGCTTGCACCCGGGTGGAACGGCAATGATAGATGGAGTTGCGAAGAGCTTGGAGCTG
AGTGAGAGTGATATGGAGCCTGCTAGAATGACACTGCATCGATTTGGGAACACTTCTGCG
AGTAGTGTGTGGTATGTTTTGGGGTACATGGAGGCGAAGAAGAGGCTGAAGAAGGGGGAT
AGGGTTTTGATGATCAGTTTTGGTGCTGGGTTCAAGTGCAATAGCTGTATGTGGGACGTG
GTGAGAGATTTAGAAGACGGAAATGTTTGGGAAGACTGTGTTTCACTATATCCTCCTAAA
ACCCTAGCCAACCCTTTCATGGAGAAGTATGGTTGGATTTATCAAGAGGATCCAACCACC
AGAGGTTGGAGTTCATGGTAA