Gene sequences

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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_00s0317g00150.t01
CDS Infomation	cds chromosome:12X:Un:23065857:23068661:-1 gene:VIT_00s0317g00150 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7TRP9]
Sequence	ATGGCTTCGCTGCCCTACGCTGATGTCGATTCCAACCTCAGAGATCTCGCCGGAAAGGCC GAGGGATTCGGCAGATTGGCCGTCGGCGGCCTCCATGGCCCCATCTATTCCGTTACTACA TTGGCCGATGATGGACCAGGATCACTTCGTGAGGGCTGCCGTAGACAAGAACCACTTTGG ATTGTTTTTGAAATTTCAGGCACCATTAATCTTTCATCCTACTTGAGTGTATCATCTTAT AAGACGATTGATGGCCGGGGCCAAAGGATAAAGTTCACAGGCAAGGGCCTGAGACTCAAA GAATGTGAGCACATAATCATATGCAACCTGGAATTTGAAGGTGGTAGAGGACATGATGTT GATGGCATTCAAATAAAACCAAATTCTAGACACATATGGATAGACCGATGCAGCCTGCAT GATTATGATGATGGACTTATAGATATCACCCGCCAAAGCACAGATATTACAGTTTCTAGA TGTTACTTCTCACAACATGACAAGACAATGCTTATTGGAGCAGACCCTTCTCACATTGGG GACAGATGCATCCGGGTGACCATTCACCATTGTTTTTTTGATGGAACGCGGCAAAGGCAG CCTCGTGTTAGGTTTGGAAAAGTTCATCTGTATAACAATTACACCAGAAATTGGAGTGTG TATGCTGTTTGTGCTAGTGTTGAATCACAGATATACTCCCAAAACAACATCTATGAAGCG GGAGAGAAGAAAGTGGCTTTTAAATATTATACAGAGATGGCAGCAGACATGGAGGAGGCA AAGTCTGGATTAATAAGGTCTGAAGGGGACTTGTTCCTGAGTGGAGCTCAATCATGCTTA TTAACAGGAATTGGTGAAGAATGCATATTCCATCCAAGTGAATATTACCCGACATGGACG ATAGAACTGGCCTCAGATTCTCTGAAAAATGTGCTCCAAGTTTGTACCGGTTGGCAAGCC ATTCCCAGGCCAGCAGAGCTAATGACAAGTGCATAG

Peptide Sequence

PEP ID	VIT_00s0317g00150.t01
PEP Infomation	pep chromosome:12X:Un:23065857:23068661:-1 gene:VIT_00s0317g00150 transcript:VIT_00s0317g00150.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7TRP9]
Sequence	MASLPYADVDSNLRDLAGKAEGFGRLAVGGLHGPIYSVTTLADDGPGSLREGCRRQEPLW IVFEISGTINLSSYLSVSSYKTIDGRGQRIKFTGKGLRLKECEHIIICNLEFEGGRGHDV DGIQIKPNSRHIWIDRCSLHDYDDGLIDITRQSTDITVSRCYFSQHDKTMLIGADPSHIG DRCIRVTIHHCFFDGTRQRQPRVRFGKVHLYNNYTRNWSVYAVCASVESQIYSQNNIYEA GEKKVAFKYYTEMAADMEEAKSGLIRSEGDLFLSGAQSCLLTGIGEECIFHPSEYYPTWT IELASDSLKNVLQVCTGWQAIPRPAELMTSA

Transcript Sequence

Transcript ID	VIT_00s0317g00150.t01
Transcript Infomation	cdna chromosome:12X:Un:23065857:23068661:-1 gene:VIT_00s0317g00150 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7TRP9]
Sequence	ATGGCTTCGCTGCCCTACGCTGATGTCGATTCCAACCTCAGAGATCTCGCCGGAAAGGCC GAGGGATTCGGCAGATTGGCCGTCGGCGGCCTCCATGGCCCCATCTATTCCGTTACTACA TTGGCCGATGATGGACCAGGATCACTTCGTGAGGGCTGCCGTAGACAAGAACCACTTTGG ATTGTTTTTGAAATTTCAGGCACCATTAATCTTTCATCCTACTTGAGTGTATCATCTTAT AAGACGATTGATGGCCGGGGCCAAAGGATAAAGTTCACAGGCAAGGGCCTGAGACTCAAA GAATGTGAGCACATAATCATATGCAACCTGGAATTTGAAGGTGGTAGAGGACATGATGTT GATGGCATTCAAATAAAACCAAATTCTAGACACATATGGATAGACCGATGCAGCCTGCAT GATTATGATGATGGACTTATAGATATCACCCGCCAAAGCACAGATATTACAGTTTCTAGA TGTTACTTCTCACAACATGACAAGACAATGCTTATTGGAGCAGACCCTTCTCACATTGGG GACAGATGCATCCGGGTGACCATTCACCATTGTTTTTTTGATGGAACGCGGCAAAGGCAG CCTCGTGTTAGGTTTGGAAAAGTTCATCTGTATAACAATTACACCAGAAATTGGAGTGTG TATGCTGTTTGTGCTAGTGTTGAATCACAGATATACTCCCAAAACAACATCTATGAAGCG GGAGAGAAGAAAGTGGCTTTTAAATATTATACAGAGATGGCAGCAGACATGGAGGAGGCA AAGTCTGGATTAATAAGGTCTGAAGGGGACTTGTTCCTGAGTGGAGCTCAATCATGCTTA TTAACAGGAATTGGTGAAGAATGCATATTCCATCCAAGTGAATATTACCCGACATGGACG ATAGAACTGGCCTCAGATTCTCTGAAAAATGTGCTCCAAGTTTGTACCGGTTGGCAAGCC ATTCCCAGGCCAGCAGAGCTAATGACAAGTGCATAGCAGTAGCATGGCATTGCTGAAACC TTTATGTTAACT