Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0317g00060.t01
CDS Infomation

cds chromosome:12X:Un:23021179:23024433:1 gene:VIT_00s0317g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCATGTTGAAGCAAGAGAAAGGAAAGCATTGGGGAGTGGCATGGAACCTTTTGGGCAT
GGATCTAGAGTTTCTGGGGAAACTGCAAATGTAATTGGCAAGACAATGAAGCATATTGCA
AGCAGCAGTTTTACCAATGTATCGAGATCAGGATTCGGAGGTGATGACACCTCTTTGAAT
GAATTTGAAGTTATGAAGCCCTCTTCCCCAGATTTTATTAATTGGAAGAACCGACACCAA
AAATCATTTTCTTACTGGAATGGGTTTTCTGTGGCCGGAGAAACCAAGAAGCAACTCTCA
GAAAGATGGAAGATGACCAAAAGTTGCCAAGAAATTGGGCTGGTTGGTAGAGGCAGTACC
CTGGGTGAAATGCTTGCCATGCCTGATCATGAAACAAGGCCAAGAAATTTGGATTGCAAG
CATGGTAAGAATAGCCAAAGCAATCAATTTGGTGCAAATGATGGAGATGTGAACTTGTGT
ACTCCTTTGGGCATTAGCAGTAAGGATGGTTGGAAGGATGGATGTGTCAAAAGTTCTCCA
AAATCCGGATCTCTTCCTGCTTCTGCTTCCATTGGCAGTCATAAACCCATGACTGGAAAT
GAAGTTCTTCATTGTGATTGGTATATGACACCAGAAGAGGCTGTTGATGGGGAACCACAA
AAATCAGGGAAGCAGAATTCTGACTTAAATGACCGTTCAGGACCCAGAAACTCAAGATTA
AGCTCTCAGAAATCTGTGTCCATTCCTTTCTTGGATTCAGAAAATAATCATACTGCACAA
GAAGCTTGTGTGATCTTGAGTGAGCTGAAGCACAAAATTGAGGAGAGTAATCTGTCTGAA
CAAAGTTATGGGGTTCCTAAGTTTATGAGTAGCAGTTGCTCTTGCTCTGATTCAGAAAGT
AATCACACAGTACAAAAAACTCAGGTGCTTCAGCCTGAGTTGAATGATTCATTTGGACAG
AATTTGCAGGTTCCTGAGTCATCAATTGTTAATGTTGCCTCCATAAGTGCAGTTGCTGAC
ATTGTGGCTTATTCTGAAACAGAGGATATTGGTTTGTCGTTTGGAATCACCAATGAGCAG
CAGTCTAAACCAATGGCCAGCATCTTGTTGGTGAAAGATGGAGATTCTGCTAGCTGTAAC
TCAGTTGCTTCAATTCTGGAGGAAGGATCAATTGGATCCCCTGGTGGAAGTTCAGTTTCC
TCACACTGCACTGGAACAAACCCAGAATCTTCTGTGAGCTTGGAGGAGGCTTATCAGCCA
AGTCCAGTTTCTGTTTTGGAACTACCATTCAAAGGAGAGATTTCATCTGGCTCTGAAGGC
TTTGAGAGTGTCAGTGCTGACAACTGTGGTTTACAGATGCAGCTTCAGCTTCTCAAATCA
GAGTCCCCAGAGGCATACTCAGAAGGGCCTGGAATGGTCATCTCAAGTGATGAGGACACT
GAGGAAGAATCTATTGGTCTTTATGATGAAAAAAGAGAACCAAGGGGATTATCCAAAGCC
AGAGAGAGTAGGGATTTCTCCTACCTAGTTGATGTTTTAGTCGAGGCAGGTTTTTGTGGA
AGCGACTTGGAAATGGACCTTGAAACATGGCATTCTCCAGAATGTCCAATGAGCCGTTTG
GTGTTCGAGAAGTTAGAGAAGAAGTATGGTGAGCAGACATCTTGGAAGAGGTCAGAAAGG
ATGCTCCTATTTGACCGTATAAATTCAGGGTTGATGGAAATTCTCTGGCCATGCACAGAG
ATTCACATGTGGATGGGATCTGTGACAAAAAGATTGAGCTTCAAGCTGAGCCAGGAAATG
ATTGAGGAGGAGCTATGGAAAATCCTTGCCAGTCAAGAGAAGGAAATGAACAAGAATTTA
TCTGGGAAGGCATTGGGAAGGGAAACACGGTGGTTAGAGTTAGGAGACAATATTACTATA
ATTGGTAGAGAAATAGAGAGCTTGTTGCTTGACGAGCTAGCGGCCGAGTTCGTGAGTATG
GAGAATTTTTGA

Peptide Sequence

PEP ID

VIT_00s0317g00060.t01
PEP Infomation

pep chromosome:12X:Un:23021179:23024433:1 gene:VIT_00s0317g00060 transcript:VIT_00s0317g00060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MHVEARERKALGSGMEPFGHGSRVSGETANVIGKTMKHIASSSFTNVSRSGFGGDDTSLN
EFEVMKPSSPDFINWKNRHQKSFSYWNGFSVAGETKKQLSERWKMTKSCQEIGLVGRGST
LGEMLAMPDHETRPRNLDCKHGKNSQSNQFGANDGDVNLCTPLGISSKDGWKDGCVKSSP
KSGSLPASASIGSHKPMTGNEVLHCDWYMTPEEAVDGEPQKSGKQNSDLNDRSGPRNSRL
SSQKSVSIPFLDSENNHTAQEACVILSELKHKIEESNLSEQSYGVPKFMSSSCSCSDSES
NHTVQKTQVLQPELNDSFGQNLQVPESSIVNVASISAVADIVAYSETEDIGLSFGITNEQ
QSKPMASILLVKDGDSASCNSVASILEEGSIGSPGGSSVSSHCTGTNPESSVSLEEAYQP
SPVSVLELPFKGEISSGSEGFESVSADNCGLQMQLQLLKSESPEAYSEGPGMVISSDEDT
EEESIGLYDEKREPRGLSKARESRDFSYLVDVLVEAGFCGSDLEMDLETWHSPECPMSRL
VFEKLEKKYGEQTSWKRSERMLLFDRINSGLMEILWPCTEIHMWMGSVTKRLSFKLSQEM
IEEELWKILASQEKEMNKNLSGKALGRETRWLELGDNITIIGREIESLLLDELAAEFVSM
ENF

Transcript Sequence

Transcript ID

VIT_00s0317g00060.t01
Transcript Infomation

cdna chromosome:12X:Un:23021179:23024433:1 gene:VIT_00s0317g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCATGTTGAAGCAAGAGAAAGGAAAGCATTGGGGAGTGGCATGGAACCTTTTGGGCAT
GGATCTAGAGTTTCTGGGGAAACTGCAAATGTAATTGGCAAGACAATGAAGCATATTGCA
AGCAGCAGTTTTACCAATGTATCGAGATCAGGATTCGGAGGTGATGACACCTCTTTGAAT
GAATTTGAAGTTATGAAGCCCTCTTCCCCAGATTTTATTAATTGGAAGAACCGACACCAA
AAATCATTTTCTTACTGGAATGGGTTTTCTGTGGCCGGAGAAACCAAGAAGCAACTCTCA
GAAAGATGGAAGATGACCAAAAGTTGCCAAGAAATTGGGCTGGTTGGTAGAGGCAGTACC
CTGGGTGAAATGCTTGCCATGCCTGATCATGAAACAAGGCCAAGAAATTTGGATTGCAAG
CATGGTAAGAATAGCCAAAGCAATCAATTTGGTGCAAATGATGGAGATGTGAACTTGTGT
ACTCCTTTGGGCATTAGCAGTAAGGATGGTTGGAAGGATGGATGTGTCAAAAGTTCTCCA
AAATCCGGATCTCTTCCTGCTTCTGCTTCCATTGGCAGTCATAAACCCATGACTGGAAAT
GAAGTTCTTCATTGTGATTGGTATATGACACCAGAAGAGGCTGTTGATGGGGAACCACAA
AAATCAGGGAAGCAGAATTCTGACTTAAATGACCGTTCAGGACCCAGAAACTCAAGATTA
AGCTCTCAGAAATCTGTGTCCATTCCTTTCTTGGATTCAGAAAATAATCATACTGCACAA
GAAGCTTGTGTGATCTTGAGTGAGCTGAAGCACAAAATTGAGGAGAGTAATCTGTCTGAA
CAAAGTTATGGGGTTCCTAAGTTTATGAGTAGCAGTTGCTCTTGCTCTGATTCAGAAAGT
AATCACACAGTACAAAAAACTCAGGTGCTTCAGCCTGAGTTGAATGATTCATTTGGACAG
AATTTGCAGGTTCCTGAGTCATCAATTGTTAATGTTGCCTCCATAAGTGCAGTTGCTGAC
ATTGTGGCTTATTCTGAAACAGAGGATATTGGTTTGTCGTTTGGAATCACCAATGAGCAG
CAGTCTAAACCAATGGCCAGCATCTTGTTGGTGAAAGATGGAGATTCTGCTAGCTGTAAC
TCAGTTGCTTCAATTCTGGAGGAAGGATCAATTGGATCCCCTGGTGGAAGTTCAGTTTCC
TCACACTGCACTGGAACAAACCCAGAATCTTCTGTGAGCTTGGAGGAGGCTTATCAGCCA
AGTCCAGTTTCTGTTTTGGAACTACCATTCAAAGGAGAGATTTCATCTGGCTCTGAAGGC
TTTGAGAGTGTCAGTGCTGACAACTGTGGTTTACAGATGCAGCTTCAGCTTCTCAAATCA
GAGTCCCCAGAGGCATACTCAGAAGGGCCTGGAATGGTCATCTCAAGTGATGAGGACACT
GAGGAAGAATCTATTGGTCTTTATGATGAAAAAAGAGAACCAAGGGGATTATCCAAAGCC
AGAGAGAGTAGGGATTTCTCCTACCTAGTTGATGTTTTAGTCGAGGCAGGTTTTTGTGGA
AGCGACTTGGAAATGGACCTTGAAACATGGCATTCTCCAGAATGTCCAATGAGCCGTTTG
GTGTTCGAGAAGTTAGAGAAGAAGTATGGTGAGCAGACATCTTGGAAGAGGTCAGAAAGG
ATGCTCCTATTTGACCGTATAAATTCAGGGTTGATGGAAATTCTCTGGCCATGCACAGAG
ATTCACATGTGGATGGGATCTGTGACAAAAAGATTGAGCTTCAAGCTGAGCCAGGAAATG
ATTGAGGAGGAGCTATGGAAAATCCTTGCCAGTCAAGAGAAGGAAATGAACAAGAATTTA
TCTGGGAAGGCATTGGGAAGGGAAACACGGTGGTTAGAGTTAGGAGACAATATTACTATA
ATTGGTAGAGAAATAGAGAGCTTGTTGCTTGACGAGCTAGCGGCCGAGTTCGTGAGTATG
GAGAATTTTTGAACCATATATTTTCTATTCTTTGATAGGAAAACAAGAAGTGATTCTTTT
TGGAGAATATATTTATGTACATATATAGCAGAATATTTTATCGAGTGAAGTTTGAGGCAG
TTTTGAAGTTTTGATGTTTGAAGAGGATATATAAAATTCAGTGTGGTTATACCAGGATGG
CTTGGAATCAATAGACATCCATACGAAAATATACAGATTCAGTGGTTTTTTTTGTG