Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0313g00040.t01
CDS Infomation

cds chromosome:12X:Un:22818856:22821424:1 gene:VIT_00s0313g00040 gene_biotype:protein_coding transcript_biotype:protein_coding description:Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [Source:UniProtKB/TrEMBL;Acc:D7U6A1]
Sequence

ATGGCGTTCTTCTCACTTCTAAGGCGTCTGTATCTCACCATCTACAACTGGGTCGTCTTC
TTCGGATGGGCTCAGGTATTGTTTTTTGCTCTTTCAACTCTGAAAGAATCGGGCCACCAG
CATGTCTACCGCGCAGTTGAAAGGCCTCTTCAGCTCGCCCAAACGGCCGCCGTTCTGGAG
ATTTTTCATGGCCTAGTAGGATTGGTGAGATCTCCAATCACAGCGACACTGCCACAGATT
GGTTCAAGGTTGTATGTAACTTGGGGCATTTTATGGAGTTTTCCTGAGGTTCAAACTCAT
GTACTTGTTAGCTCTTTGGTGATCAGCTGGTCTATCACTGAGATCATTCGGTATTCTTTC
TTTGGCGTGAAGGAGTTGCTTGGTTTTGCACCAGCCTGGCTCTTGTGGCTCAGGTATAGC
ACCTTTCTGTTGTTGTATCCAACCGGCATTACCAGTGAAGTTGGTCTAATATATATTGCC
TTGCCATACATTAAGGAATCAGCAAAATATTGTTTGAGGATGCCCAACAAATGGAACTTC
TCTTTTGATTACTTCTATGCTGCACTTCTGGTCATTGCATTCTATGTACCAGGCAGTCCT
CATATGTACCAGTACATGCTTGGGCAGAGGAAGCGAGCTCTCTCCAAATCGAAGAGGGAG
TAG

Peptide Sequence

PEP ID

VIT_00s0313g00040.t01
PEP Infomation

pep chromosome:12X:Un:22818856:22821424:1 gene:VIT_00s0313g00040 transcript:VIT_00s0313g00040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [Source:UniProtKB/TrEMBL;Acc:D7U6A1]
Sequence

MAFFSLLRRLYLTIYNWVVFFGWAQVLFFALSTLKESGHQHVYRAVERPLQLAQTAAVLE
IFHGLVGLVRSPITATLPQIGSRLYVTWGILWSFPEVQTHVLVSSLVISWSITEIIRYSF
FGVKELLGFAPAWLLWLRYSTFLLLYPTGITSEVGLIYIALPYIKESAKYCLRMPNKWNF
SFDYFYAALLVIAFYVPGSPHMYQYMLGQRKRALSKSKRE

Transcript Sequence

Transcript ID

VIT_00s0313g00040.t01
Transcript Infomation

cdna chromosome:12X:Un:22818856:22821424:1 gene:VIT_00s0313g00040 gene_biotype:protein_coding transcript_biotype:protein_coding description:Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [Source:UniProtKB/TrEMBL;Acc:D7U6A1]
Sequence

CAGATCTCCCATGGCGTTCTTCTCACTTCTAAGGCGTCTGTATCTCACCATCTACAACTG
GGTCGTCTTCTTCGGATGGGCTCAGGTATTGTTTTTTGCTCTTTCAACTCTGAAAGAATC
GGGCCACCAGCATGTCTACCGCGCAGTTGAAAGGCCTCTTCAGCTCGCCCAAACGGCCGC
CGTTCTGGAGATTTTTCATGGCCTAGTAGGATTGGTGAGATCTCCAATCACAGCGACACT
GCCACAGATTGGTTCAAGGTTGTATGTAACTTGGGGCATTTTATGGAGTTTTCCTGAGGT
TCAAACTCATGTACTTGTTAGCTCTTTGGTGATCAGCTGGTCTATCACTGAGATCATTCG
GTATTCTTTCTTTGGCGTGAAGGAGTTGCTTGGTTTTGCACCAGCCTGGCTCTTGTGGCT
CAGGTATAGCACCTTTCTGTTGTTGTATCCAACCGGCATTACCAGTGAAGTTGGTCTAAT
ATATATTGCCTTGCCATACATTAAGGAATCAGCAAAATATTGTTTGAGGATGCCCAACAA
ATGGAACTTCTCTTTTGATTACTTCTATGCTGCACTTCTGGTCATTGCATTCTATGTACC
AGGCAGTCCTCATATGTACCAGTACATGCTTGGGCAGAGGAAGCGAGCTCTCTCCAAATC
GAAGAGGGAGTAGAGTAAATTTTCAATGTTGAACTCTGGTTTATTGAAGCTTTGTAAGTG
TAGCAGCATAACATTTTTCCAGTTCATGATTTGGGCTGGACAAATTTGTTTTTAGCATGG
GCAAAA