Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0313g00030.t01
CDS Infomation

cds chromosome:12X:Un:22809824:22816815:-1 gene:VIT_00s0313g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTTTATTATCAGCCTCGTCGTGGAGGAGCTCTTGCTGGTCTCTTTTTTCTGCTACTT
CCGGTTTTCTTGCCCAGTCTCTTCAGTCCATTGGGGCACGCTTCTCCTTCCGTTTTCTCG
GAATGGAATGCTCCAAAACCAAGGCATTCACGTCTACTCAAAAGTGTTTTACAAGGCCAA
TCTTCAAATGTAGAGCAATCTGATCTTTGGACACCTTTGGTCAACCAAGGATGGAAAGCC
TGTGAATTATCTGCAAGCACCCCTGGCTTACCACAGGAAACTCAGGGATACATCCAAGTG
TTTCTTGATGGAGGGTTAAACCAGCAGAGAATGGGGATTTGTGATGCTGTTGCTGTTGCT
AAGATATTAAATGCTACACTTGTGATCCCACATCTTGAAGTGAATCCTGTTTGGCGGGAT
TCGAGCTCATTCATGGATATATTTGATGTTGATCACTTTATTAATGTCCTGAAGGATGAT
ATTTCTATAGTTAGAGAGTTGCCTTATGACTTCTCTTGGAGCACAAGGGAGTATTATGCT
ACAGCTATTCGAGCTACCAGAATTAAAACAGCACCTGTTCATGCTTCAGCTAAATGGTAT
CTGGACAATGTCTTGCCTGTGCTAGAGAGTTATGGAATTGCTGCAATTGCCCCATTCTCC
CACCGTCTGGCTTTCAACAACTTGCCTATGGATGTCCAACGCCTACGCTGTAAAGTCAAC
TTTCAAGCATTGGTTTTTGTTCCTCATGTCAGAGCACTTGGAGATGCTCTTGTCAGTCGC
CTCCGATACCCTAAAAAAAATGGAGCATTTGGCACTGAGTACCTGCAAGAGGTTACTGAT
GTGAAAGGCGAACAAGAGGCAGGAAAATTTGCTGTGCTACACCTTCGTTTTGATAAGGAT
ATGGCTGCCCATTCGGCTTGTGATTTTGGTGGAGGTAAAGCTGAGAAACTAGCTCTGGCT
AAGTATCGACAAACAATTTGGCAGGGAAGAGTCCTGAACTCTCAGTTCACTGATGAGGAG
TTGAGGAATCAAGGACGTTGTCCATTGACTCCAGAAGAGATTGGATTGCTGCTTGCAGCT
TTGGGCTTTGACAACACTACTCGACTATACCTTGCCTCCCACAAGGTGTATGGTGGGGCA
GCCAGGATTTCAACGTTAAGAGAATTGTTTCCACTAATGGAAGACAAAAAGAGCCTTGCT
TCTTCAGATGAACGAGCCCAAATTAAGGGAAAGGCGTCTTTGTTGGCTGCAGTTGATTAC
TATGTTAGCATGCATAGTGACATTTTCATCTCTGCTTCTCCGGGAAATATGCACAATGCA
TTGGTGGGACATCGAACTTATGAGAACTTGAAGACAATCAGGCCAAACATGGCATTGTTG
GGCCAGCTCTTCCTGAATAAGAGCATAGGTTGGTCAGAATTCCAACAGGCTGTGGTGGAA
GGGCACGAAAACCGACAAGGGCAGATCAGGTTACGGAAATCTGAACAATCTCTTTATACA
TATCCCGCCCCTGATTGCATGTGCAATGCTTAA

Peptide Sequence

PEP ID

VIT_00s0313g00030.t01
PEP Infomation

pep chromosome:12X:Un:22809824:22816815:-1 gene:VIT_00s0313g00030 transcript:VIT_00s0313g00030.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MFYYQPRRGGALAGLFFLLLPVFLPSLFSPLGHASPSVFSEWNAPKPRHSRLLKSVLQGQ
SSNVEQSDLWTPLVNQGWKACELSASTPGLPQETQGYIQVFLDGGLNQQRMGICDAVAVA
KILNATLVIPHLEVNPVWRDSSSFMDIFDVDHFINVLKDDISIVRELPYDFSWSTREYYA
TAIRATRIKTAPVHASAKWYLDNVLPVLESYGIAAIAPFSHRLAFNNLPMDVQRLRCKVN
FQALVFVPHVRALGDALVSRLRYPKKNGAFGTEYLQEVTDVKGEQEAGKFAVLHLRFDKD
MAAHSACDFGGGKAEKLALAKYRQTIWQGRVLNSQFTDEELRNQGRCPLTPEEIGLLLAA
LGFDNTTRLYLASHKVYGGAARISTLRELFPLMEDKKSLASSDERAQIKGKASLLAAVDY
YVSMHSDIFISASPGNMHNALVGHRTYENLKTIRPNMALLGQLFLNKSIGWSEFQQAVVE
GHENRQGQIRLRKSEQSLYTYPAPDCMCNA

Transcript Sequence

Transcript ID

VIT_00s0313g00030.t01
Transcript Infomation

cdna chromosome:12X:Un:22809824:22816815:-1 gene:VIT_00s0313g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGCATGTGACTTGTGAGGTGCTTACACTCAAGACTGTAAGAATATTAATGGCTTTCTTCC
ATATAAGTTAAAGACGCCCTATCTTCAGGGACTGCCTTTCCCGCTTTGGGTTCCAGATCT
AAGCCTCAGCTGCCGCCGCTCTCACCACCCGCCACCATGTTTTATTATCAGCCTCGTCGT
GGAGGAGCTCTTGCTGGTCTCTTTTTTCTGCTACTTCCGGTTTTCTTGCCCAGTCTCTTC
AGTCCATTGGGGCACGCTTCTCCTTCCGTTTTCTCGGAATGGAATGCTCCAAAACCAAGG
CATTCACGTCTACTCAAAAGTGTTTTACAAGGCCAATCTTCAAATGTAGAGCAATCTGAT
CTTTGGACACCTTTGGTCAACCAAGGATGGAAAGCCTGTGAATTATCTGCAAGCACCCCT
GGCTTACCACAGGAAACTCAGGGATACATCCAAGTGTTTCTTGATGGAGGGTTAAACCAG
CAGAGAATGGGGATTTGTGATGCTGTTGCTGTTGCTAAGATATTAAATGCTACACTTGTG
ATCCCACATCTTGAAGTGAATCCTGTTTGGCGGGATTCGAGCTCATTCATGGATATATTT
GATGTTGATCACTTTATTAATGTCCTGAAGGATGATATTTCTATAGTTAGAGAGTTGCCT
TATGACTTCTCTTGGAGCACAAGGGAGTATTATGCTACAGCTATTCGAGCTACCAGAATT
AAAACAGCACCTGTTCATGCTTCAGCTAAATGGTATCTGGACAATGTCTTGCCTGTGCTA
GAGAGTTATGGAATTGCTGCAATTGCCCCATTCTCCCACCGTCTGGCTTTCAACAACTTG
CCTATGGATGTCCAACGCCTACGCTGTAAAGTCAACTTTCAAGCATTGGTTTTTGTTCCT
CATGTCAGAGCACTTGGAGATGCTCTTGTCAGTCGCCTCCGATACCCTAAAAAAAATGGA
GCATTTGGCACTGAGTACCTGCAAGAGGTTACTGATGTGAAAGGCGAACAAGAGGCAGGA
AAATTTGCTGTGCTACACCTTCGTTTTGATAAGGATATGGCTGCCCATTCGGCTTGTGAT
TTTGGTGGAGGTAAAGCTGAGAAACTAGCTCTGGCTAAGTATCGACAAACAATTTGGCAG
GGAAGAGTCCTGAACTCTCAGTTCACTGATGAGGAGTTGAGGAATCAAGGACGTTGTCCA
TTGACTCCAGAAGAGATTGGATTGCTGCTTGCAGCTTTGGGCTTTGACAACACTACTCGA
CTATACCTTGCCTCCCACAAGGTGTATGGTGGGGCAGCCAGGATTTCAACGTTAAGAGAA
TTGTTTCCACTAATGGAAGACAAAAAGAGCCTTGCTTCTTCAGATGAACGAGCCCAAATT
AAGGGAAAGGCGTCTTTGTTGGCTGCAGTTGATTACTATGTTAGCATGCATAGTGACATT
TTCATCTCTGCTTCTCCGGGAAATATGCACAATGCATTGGTGGGACATCGAACTTATGAG
AACTTGAAGACAATCAGGCCAAACATGGCATTGTTGGGCCAGCTCTTCCTGAATAAGAGC
ATAGGTTGGTCAGAATTCCAACAGGCTGTGGTGGAAGGGCACGAAAACCGACAAGGGCAG
ATCAGGTTACGGAAATCTGAACAATCTCTTTATACATATCCCGCCCCTGATTGCATGTGC
AATGCTTAAGATGAGACATGTGCTCTAGAGAACTGCTTGCCCCACCTACCTATGTATACA
GACCCTGCTCCTGATTGCATCTGCCATGCTGAGGTGAGATATGTGATCCTGAGGGATGTG
AGCCTACTTACCTGTCT