Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0304g00080.t01
CDS Infomation

cds chromosome:12X:Un:22456140:22459197:-1 gene:VIT_00s0304g00080 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trehalose 6-phosphate phosphatase (Fragment) [Source:UniProtKB/TrEMBL;Acc:F6I7F4]
Sequence

AGTTTGATTGGAGAAAGAGCAGAGATGACGAGGCAGAATGTAGTTGTAGCCGATAGCAAA
TCCGGTATCAACGTGGCGATAACGATGACGGTATCGAACTCATCCCTGTTCACGAAGGCG
GTACAGAAGACTCGGGAGACACAGGGGGGATGCATAAACATTCCACCGAAGAAAGTCGGA
GGTGGAGCGAGAATCAACGCGTGGGTTGATTCAATGAGAGCTTCCTCCCCCACCCGTGTC
AAATCCGCAGCTTCTCTATCCGACCAGAACTCTTGGATGCTTCGCCACCCATCAGCTTTG
AACATGTTCGAGCAAATAATAGAAGCTTCAAAGGGCAAGCAAATAGTGATGTTTTTGGAC
TACGACGGCACGCTTTCGCCCATAGTTGATGACCCGGATCGCGCTTTCATGTCCGACGCG
ATGAGAGCAGCAGTGAGACAGCTTGCTAGATATTTCCCCACTGCTATAGTGAGTGGAAGA
TGCAGGGACAAGGTGTACAACTTTGTACGATTAGCAGAGCTTTACTATGCAGGCAGTCAC
GGCATGGACATTAAAGGACCAGCAAAAGGTTCCAAATACAAAAAAGAGACAAAGGCTGTC
CTCTTCCAACCAGCCAGTGAATTCCTTCCCATGATCGACGAGGTTTACAAAGCATTGTTG
GAGAAAACCAAGTCCATCCCAGGAGCAAGTGTGGAGCACAACAAGTTCTGTCTCTCTGTG
CATTACCGCTGTGTTGATGAGAAGAAGTGGAGTATTCTGGCACAGCAGGTTAGATCAGTG
TTACAGCAGTACCCTAAGCTTCGACTGACTCAAGGAAGGAAGGTGTTGGAGATCCGTCCT
ACCATTAAATGGGACAAAGGGAAGGCTCTTGAATTTTTGTTAGAGTCGCTCGGATTTGGC
AACTGTACCGATGTTTTTCCTGTTTACATTGGAGATGATCGAACTGATGAAGATGCATTC
AAGATCTTAAGAGATAGGGGACAAGGTTTTGGCATTCTAGTCTCTAAAATTCCCAAGGAT
ACCTCTGCATCTTATTCCCTACAGGAACCCCTTGAGGTTATGTACTTTTTACAACGCTTG
GTAGAGTGGAAGCGACTGTCAATGAGGCAATACAGGGTGTAA

Peptide Sequence

PEP ID

VIT_00s0304g00080.t01
PEP Infomation

pep chromosome:12X:Un:22456140:22459197:-1 gene:VIT_00s0304g00080 transcript:VIT_00s0304g00080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trehalose 6-phosphate phosphatase (Fragment) [Source:UniProtKB/TrEMBL;Acc:F6I7F4]
Sequence

SLIGERAEMTRQNVVVADSKSGINVAITMTVSNSSLFTKAVQKTRETQGGCINIPPKKVG
GGARINAWVDSMRASSPTRVKSAASLSDQNSWMLRHPSALNMFEQIIEASKGKQIVMFLD
YDGTLSPIVDDPDRAFMSDAMRAAVRQLARYFPTAIVSGRCRDKVYNFVRLAELYYAGSH
GMDIKGPAKGSKYKKETKAVLFQPASEFLPMIDEVYKALLEKTKSIPGASVEHNKFCLSV
HYRCVDEKKWSILAQQVRSVLQQYPKLRLTQGRKVLEIRPTIKWDKGKALEFLLESLGFG
NCTDVFPVYIGDDRTDEDAFKILRDRGQGFGILVSKIPKDTSASYSLQEPLEVMYFLQRL
VEWKRLSMRQYRV

Transcript Sequence

Transcript ID

VIT_00s0304g00080.t01
Transcript Infomation

cdna chromosome:12X:Un:22456140:22459197:-1 gene:VIT_00s0304g00080 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trehalose 6-phosphate phosphatase (Fragment) [Source:UniProtKB/TrEMBL;Acc:F6I7F4]
Sequence

CCCCCTCTCTTTCTCTGATCTTTGTCACTCGGTTTGCCTTTACGGCTTCTTTGTTTCCTG
CTTTATTAAGCCTTCCCTTCATTTAGTTTTTCTTCCTTCTCTTTTTTTATTCTTTAATCC
CTCAGCCTCAGAGCTGAGCTTTCAGCACAGAGCACTCTCTCGGCCTCCCTGTTTCTTTAA
TTTTTTTTTCTTTCATCTGCTTCACCGGCGCTCGTTTCCCTGTAAACTCTTAAGGCCTTT
AGAGTTTGATTGGAGAAAGAGCAGAGATGACGAGGCAGAATGTAGTTGTAGCCGATAGCA
AATCCGGTATCAACGTGGCGATAACGATGACGGTATCGAACTCATCCCTGTTCACGAAGG
CGGTACAGAAGACTCGGGAGACACAGGGGGGATGCATAAACATTCCACCGAAGAAAGTCG
GAGGTGGAGCGAGAATCAACGCGTGGGTTGATTCAATGAGAGCTTCCTCCCCCACCCGTG
TCAAATCCGCAGCTTCTCTATCCGACCAGAACTCTTGGATGCTTCGCCACCCATCAGCTT
TGAACATGTTCGAGCAAATAATAGAAGCTTCAAAGGGCAAGCAAATAGTGATGTTTTTGG
ACTACGACGGCACGCTTTCGCCCATAGTTGATGACCCGGATCGCGCTTTCATGTCCGACG
CGATGAGAGCAGCAGTGAGACAGCTTGCTAGATATTTCCCCACTGCTATAGTGAGTGGAA
GATGCAGGGACAAGGTGTACAACTTTGTACGATTAGCAGAGCTTTACTATGCAGGCAGTC
ACGGCATGGACATTAAAGGACCAGCAAAAGGTTCCAAATACAAAAAAGAGACAAAGGCTG
TCCTCTTCCAACCAGCCAGTGAATTCCTTCCCATGATCGACGAGGTTTACAAAGCATTGT
TGGAGAAAACCAAGTCCATCCCAGGAGCAAGTGTGGAGCACAACAAGTTCTGTCTCTCTG
TGCATTACCGCTGTGTTGATGAGAAGAAGTGGAGTATTCTGGCACAGCAGGTTAGATCAG
TGTTACAGCAGTACCCTAAGCTTCGACTGACTCAAGGAAGGAAGGTGTTGGAGATCCGTC
CTACCATTAAATGGGACAAAGGGAAGGCTCTTGAATTTTTGTTAGAGTCGCTCGGATTTG
GCAACTGTACCGATGTTTTTCCTGTTTACATTGGAGATGATCGAACTGATGAAGATGCAT
TCAAGATCTTAAGAGATAGGGGACAAGGTTTTGGCATTCTAGTCTCTAAAATTCCCAAGG
ATACCTCTGCATCTTATTCCCTACAGGAACCCCTTGAGGTTATGTACTTTTTACAACGCT
TGGTAGAGTGGAAGCGACTGTCAATGAGGCAATACAGGGTGTAAAGAGCAGAAGAAATTG
AATATTCTCCCTCCCTTTTGAGAAATGTCATAAGGGTTGGATGAAAATATGTAATTTCTT
GTTGAAGAATTAGTTTAAGATAATGATTAAAAAAAAAAGGAGGGAAGAAAAAGGACTTCC
CCCTTGGCTTGAAGGCCTTGTACATCTTGTAAGTTTGTCACTACCTGTGTACAAGGAAGA
AAGTTTGTAACTGTGCAACTTGTCTAAATGGATAAAGCAT