Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0304g00060.t01
CDS Infomation

cds chromosome:12X:Un:22438120:22441039:1 gene:VIT_00s0304g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACGGAAATGGTAGACACGTCGCCAAATAAGAGTTCGGGCTGTGGCTTGCTGAATGCA
GTTTTTGGACGGCGAACTTTCTGGTTGAGAAGAGCAACCTCTACAGGCTCACTGCCCTCG
ATGAACAGCATTAATATCAGCAGGGTCTCGGGCACTCCCAGTTCAAAGAGGCGACGAGGC
AGCAGCTCCGATGAAACCTCCTTTCTCAACCAATCTAATTCGTCAGAAGCGGCATCAGGA
CTAGGTGATAAACCCATCATCAGACCTTCCCCAAGTCATACCAAGACCCCGCCAATATAT
AATCAAAATCAAGGAAGAAGAAGTGATGAAGCAATCATGCAACCATCGTTGCGCTCAGGT
GCAATGAAAATGTCACAGAGGGAGGCTTACGTTAACCAGGGAAGAAGGGTACCAAGGGAA
GCAATTGGCATATCGGGGGAGCTGGAAGCCATGATCGCCGATCACCAGAGTTCAAAGGGA
AACAGCTCATTGGTTCGAGCTTCCTCCAGCAATGTCATGCTGTTTAGCAATTTAGGTAAC
TTGAGGCAACCCGGTACAGGCAATTTCACTTCAAATAATGTGCAGGATTATCTTCCAAAA
GCTGCAAGAGAAGAGACTTCCATGCCTAATGGGAAATACTCGAGTAGCCAAATGGGGAAT
GTAGTGAAGAAACCCAATGGAGAGAAAGAACCTCCCTCATCCCTCTGCCGAGCTCTCTCA
ACTAGAATGGATCCTGAGACATTGAAGATTATGGGTAATGAAGATTACAAGAATGGAAGA
TTTGCAGAAGCCTTGGCCTTGTATGATGCAGCAATCTCTATTGACCCAAACAAGGCTTCA
TACAGAAGCAACAAGAGTGCAGCATTGACTGCCCTTGGTAGGCTCCTAGAAGCAGTTTTC
GAGTGCAGAGAAGCCCTTAGGATCGAACCTTATTATCATAGAGCACATCAACGATTGGGA
AACCTCTATCTCAGATTAGGAGAAGCAGAAAAAGCCATATATCACTTCAAACATGCAGGA
CCGGAATCTGATCCTGAGGACATGGCCAAGGCTCATTCTCTTCAGGCCCATCTCAGCAAG
TGCACCGAGGCTAGGAGGCTAAGAGATTGGAACACTCTAGTCAAAGAAGCAGGCTACACC
ATATCTGCAGGGGCAGATTCAGCACCACAGATATATACTTTGCAAGCGGAGGCCTTGTTG
AAGCTCCACAGGCACCAAGAAGCGGATGCTGTATTGGCAGCATCTCCCTATTTCAGTGTG
GACGACTGCACTAAATTCTTTGGCCCCTACGGTAATGCTAATCTATTAATGATAAGAGCC
CAGGTGGATTTGGCTGCAGGCAGATTGGACGATGCTTTTGAAGCAGCTCAAAAAGCAGCT
CGCCTTGACTCCAATAATAAAGAGGTGGGCATAGTGGTTAGGAGGACTAGAGGGGTGATC
TCAGCTCGAGCAATGGGAAACGATCTCTTCAAAGCATCTAGATTCTCCGAGGCATGTATT
GCATATGGAGAGGGTCTGGATCATGATCCCTTCAACTCAGTGTTGTTATGTAACCGAGCC
ACATGTCGGTCCAAGCTTGGTCAATTCGAGAAAGCAGTGGAGGACTGCACAGCGGCTCTA
AGTGTTCGCCCCTCTTACAGCAAAGCCAGGCTAAGAAGAGCTGATTGCAATGCTAAGTTG
GGGAGATGTGAAGCTTCAATACAAGATTATGAGGTGTTGATGAGAGAAACCCCAGAAGAT
GAGGAAGTGGGCAAGGCCATGTTTGAGGCCCAGGTACAGCTCAAGAAACAACGTGGGGAA
GATGTGAGGGACATGAAATATACTAGTGGCGCCAAAGTGGTCCACATTTCCAGCCACGAA
CGTTTCAAAGACTTTGCCACTTCACCTGGTGTCTCTGTGGCCCTTTTTTGTAGTGGGGAG
GGGAGCAAACAAGTGATACAGTTTATGGAACAACTCTGTAAGAGATACCCATCAGTCAAC
TTCCTCAAGGTTGAGGTTGAAGAGCACCCTAACATAGCAAGATCTGAAGGCGTCAGCTCA
TTGCCAGCATTTAAAATATACAAGAATGGCTCAAGGGTCAAAGAAATTTCAGGAGACAAC
CTTGATTTGTTAGAGAGCACAGTCAAATCCTATAACACCTGA

Peptide Sequence

PEP ID

VIT_00s0304g00060.t01
PEP Infomation

pep chromosome:12X:Un:22438120:22441039:1 gene:VIT_00s0304g00060 transcript:VIT_00s0304g00060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTEMVDTSPNKSSGCGLLNAVFGRRTFWLRRATSTGSLPSMNSINISRVSGTPSSKRRRG
SSSDETSFLNQSNSSEAASGLGDKPIIRPSPSHTKTPPIYNQNQGRRSDEAIMQPSLRSG
AMKMSQREAYVNQGRRVPREAIGISGELEAMIADHQSSKGNSSLVRASSSNVMLFSNLGN
LRQPGTGNFTSNNVQDYLPKAAREETSMPNGKYSSSQMGNVVKKPNGEKEPPSSLCRALS
TRMDPETLKIMGNEDYKNGRFAEALALYDAAISIDPNKASYRSNKSAALTALGRLLEAVF
ECREALRIEPYYHRAHQRLGNLYLRLGEAEKAIYHFKHAGPESDPEDMAKAHSLQAHLSK
CTEARRLRDWNTLVKEAGYTISAGADSAPQIYTLQAEALLKLHRHQEADAVLAASPYFSV
DDCTKFFGPYGNANLLMIRAQVDLAAGRLDDAFEAAQKAARLDSNNKEVGIVVRRTRGVI
SARAMGNDLFKASRFSEACIAYGEGLDHDPFNSVLLCNRATCRSKLGQFEKAVEDCTAAL
SVRPSYSKARLRRADCNAKLGRCEASIQDYEVLMRETPEDEEVGKAMFEAQVQLKKQRGE
DVRDMKYTSGAKVVHISSHERFKDFATSPGVSVALFCSGEGSKQVIQFMEQLCKRYPSVN
FLKVEVEEHPNIARSEGVSSLPAFKIYKNGSRVKEISGDNLDLLESTVKSYNT

Transcript Sequence

Transcript ID

VIT_00s0304g00060.t01
Transcript Infomation

cdna chromosome:12X:Un:22438120:22441039:1 gene:VIT_00s0304g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACGGAAATGGTAGACACGTCGCCAAATAAGAGTTCGGGCTGTGGCTTGCTGAATGCA
GTTTTTGGACGGCGAACTTTCTGGTTGAGAAGAGCAACCTCTACAGGCTCACTGCCCTCG
ATGAACAGCATTAATATCAGCAGGGTCTCGGGCACTCCCAGTTCAAAGAGGCGACGAGGC
AGCAGCTCCGATGAAACCTCCTTTCTCAACCAATCTAATTCGTCAGAAGCGGCATCAGGA
CTAGGTGATAAACCCATCATCAGACCTTCCCCAAGTCATACCAAGACCCCGCCAATATAT
AATCAAAATCAAGGAAGAAGAAGTGATGAAGCAATCATGCAACCATCGTTGCGCTCAGGT
GCAATGAAAATGTCACAGAGGGAGGCTTACGTTAACCAGGGAAGAAGGGTACCAAGGGAA
GCAATTGGCATATCGGGGGAGCTGGAAGCCATGATCGCCGATCACCAGAGTTCAAAGGGA
AACAGCTCATTGGTTCGAGCTTCCTCCAGCAATGTCATGCTGTTTAGCAATTTAGGTAAC
TTGAGGCAACCCGGTACAGGCAATTTCACTTCAAATAATGTGCAGGATTATCTTCCAAAA
GCTGCAAGAGAAGAGACTTCCATGCCTAATGGGAAATACTCGAGTAGCCAAATGGGGAAT
GTAGTGAAGAAACCCAATGGAGAGAAAGAACCTCCCTCATCCCTCTGCCGAGCTCTCTCA
ACTAGAATGGATCCTGAGACATTGAAGATTATGGGTAATGAAGATTACAAGAATGGAAGA
TTTGCAGAAGCCTTGGCCTTGTATGATGCAGCAATCTCTATTGACCCAAACAAGGCTTCA
TACAGAAGCAACAAGAGTGCAGCATTGACTGCCCTTGGTAGGCTCCTAGAAGCAGTTTTC
GAGTGCAGAGAAGCCCTTAGGATCGAACCTTATTATCATAGAGCACATCAACGATTGGGA
AACCTCTATCTCAGATTAGGAGAAGCAGAAAAAGCCATATATCACTTCAAACATGCAGGA
CCGGAATCTGATCCTGAGGACATGGCCAAGGCTCATTCTCTTCAGGCCCATCTCAGCAAG
TGCACCGAGGCTAGGAGGCTAAGAGATTGGAACACTCTAGTCAAAGAAGCAGGCTACACC
ATATCTGCAGGGGCAGATTCAGCACCACAGATATATACTTTGCAAGCGGAGGCCTTGTTG
AAGCTCCACAGGCACCAAGAAGCGGATGCTGTATTGGCAGCATCTCCCTATTTCAGTGTG
GACGACTGCACTAAATTCTTTGGCCCCTACGGTAATGCTAATCTATTAATGATAAGAGCC
CAGGTGGATTTGGCTGCAGGCAGATTGGACGATGCTTTTGAAGCAGCTCAAAAAGCAGCT
CGCCTTGACTCCAATAATAAAGAGGTGGGCATAGTGGTTAGGAGGACTAGAGGGGTGATC
TCAGCTCGAGCAATGGGAAACGATCTCTTCAAAGCATCTAGATTCTCCGAGGCATGTATT
GCATATGGAGAGGGTCTGGATCATGATCCCTTCAACTCAGTGTTGTTATGTAACCGAGCC
ACATGTCGGTCCAAGCTTGGTCAATTCGAGAAAGCAGTGGAGGACTGCACAGCGGCTCTA
AGTGTTCGCCCCTCTTACAGCAAAGCCAGGCTAAGAAGAGCTGATTGCAATGCTAAGTTG
GGGAGATGTGAAGCTTCAATACAAGATTATGAGGTGTTGATGAGAGAAACCCCAGAAGAT
GAGGAAGTGGGCAAGGCCATGTTTGAGGCCCAGGTACAGCTCAAGAAACAACGTGGGGAA
GATGTGAGGGACATGAAATATACTAGTGGCGCCAAAGTGGTCCACATTTCCAGCCACGAA
CGTTTCAAAGACTTTGCCACTTCACCTGGTGTCTCTGTGGCCCTTTTTTGTAGTGGGGAG
GGGAGCAAACAAGTGATACAGTTTATGGAACAACTCTGTAAGAGATACCCATCAGTCAAC
TTCCTCAAGGTTGAGGTTGAAGAGCACCCTAACATAGCAAGATCTGAAGGCGTCAGCTCA
TTGCCAGCATTTAAAATATACAAGAATGGCTCAAGGGTCAAAGAAATTTCAGGAGACAAC
CTTGATTTGTTAGAGAGCACAGTCAAATCCTATAACACCTGA