Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0304g00020.t01
CDS Infomation

cds chromosome:12X:Un:22372588:22375394:-1 gene:VIT_00s0304g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGGCTGCAGCAGATGCAATCGGAGACGTTGACTCTGATCCTGGTCAACCTGGCCGGG
ATCATGGAAAGAGCAGATGAATCTCTGTTGCCAGGAGTGTACAAAGAGGTTGGTGCAGCT
CTGCACACTGATCCAACAGGGCTTGGCTCACTCACTCTCTTTCGATCCATAGTTCAGTCG
TCATGTTATCCTCTCGCTGCTTACCTGGCTACGCATCACAACCGAGCCCACGTTATCGCT
CTCGGTGCTTTTCTCTGGGCCGCCGCCACTTTCCTCGTTGCCATTTCCTCCACTTTCTTC
CAGGTAGCAGTCTCAAGAGGTTTGAATGGGATTGGCCTTGCCATAGTTACCCCAGCCATT
CAGTCACTTATTGCAGACTCTACTGAAGATCACAACCGAGGAGTGGCTTTTGGGTGGCTC
CAATTGACAGGAAACCTTGGCTCAATCATCGGTGGGCTCTGTTCTGTACTAATAGCTTCA
ACATCATTCATGGGTATCCCTGGTTGGAGAGTTGCCTTCCATTTGGTTGGAGTAATAAGC
GTCATAGTTGGCATTTTGGTCCGCCTCTTTGCTACTGACCCTCACTTTTCTGATGGTAAT
AACTTGGCTAAAGACAAAATTCCGAGTAAACCATTTTGGTCAGAAGTGAAGGACCTTGTT
AAAGAAGCCAAGTCAGTTATAAGAATCCCATCCTTCCAGATAATTGTGGCCCAAGGTGTC
TCTGGTTCATTTCCCTGGTCGGCTTTGTCATTTGCCCCCATGTGGCTGGAGCTTATTGGC
TTCTCTCACAAAAAGACAGCATTCCTCATGACCCTCTTTGTAATTTCTGGTTCAATTGGG
GGCCTGTTTGGAGGAAAGATGGGGGATGTCCTTGCTAAACGTTTACCAAATTCTGGTAGA
ATAATTCTTTCACAGATAAGCTCAGCTTCAGGCGTCCCTTTGGCCACAGTATTGCTGCTG
CTCTTACCTGATGATCCATCCACTGCATTCATGCATGGTTTGGTCTTGTTCATTATGGGG
TTGTGCATATCTTGGAATCCTGCAGCAACAAACAATCCAATATTTGCAGAAATCGTCCCT
GAGAAATCTCGAACAAGCGTTTATGCTCTGGACCGATCTTTTGAGTCTATATTAGCATCA
TTTGCACCTCCTGTAGTTGGGATTTTGTCACAGCGTGTTTATGGTTATAAACCAATTCCA
GAAGGATCGACAGACTCAGCTCAGATTGAAACGGATAGGGAGAATGCTGCATCACTTGCC
AAGGCACTTTACACTGCTATTTCTATTCCATTTGTGGTCTGTTGCCTCATCTACTCCTTC
CTGTATCGTACATATCCAAGAGACAGGGAGCGAGCTAGGATGCAAGCACTAATAGACTCA
GAGATGCAACAGATGGACAGAGACGAACTTCCCTCGGGAGAAGAATACTCTCAGCTTCAT
TTTTCAGAAACAAAGGAACCCAATGACAAGGAAAGAAGCGTGATTGAAATAGAATATGGA
GATGAAAACCTTGATGTTGATGATAATGATAAGAAGACCCTACTTCCCAATCAGCAAAAA
TTCTCACATTTGGGGGAATGA

Peptide Sequence

PEP ID

VIT_00s0304g00020.t01
PEP Infomation

pep chromosome:12X:Un:22372588:22375394:-1 gene:VIT_00s0304g00020 transcript:VIT_00s0304g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRLQQMQSETLTLILVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQS
SCYPLAAYLATHHNRAHVIALGAFLWAAATFLVAISSTFFQVAVSRGLNGIGLAIVTPAI
QSLIADSTEDHNRGVAFGWLQLTGNLGSIIGGLCSVLIASTSFMGIPGWRVAFHLVGVIS
VIVGILVRLFATDPHFSDGNNLAKDKIPSKPFWSEVKDLVKEAKSVIRIPSFQIIVAQGV
SGSFPWSALSFAPMWLELIGFSHKKTAFLMTLFVISGSIGGLFGGKMGDVLAKRLPNSGR
IILSQISSASGVPLATVLLLLLPDDPSTAFMHGLVLFIMGLCISWNPAATNNPIFAEIVP
EKSRTSVYALDRSFESILASFAPPVVGILSQRVYGYKPIPEGSTDSAQIETDRENAASLA
KALYTAISIPFVVCCLIYSFLYRTYPRDRERARMQALIDSEMQQMDRDELPSGEEYSQLH
FSETKEPNDKERSVIEIEYGDENLDVDDNDKKTLLPNQQKFSHLGE

Transcript Sequence

Transcript ID

VIT_00s0304g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:22372588:22375394:-1 gene:VIT_00s0304g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGTGATGAGGCTGCAGCAGATGCAATCGGAGACGTTGACTCTGATCCTGGTCAACCTGGC
CGGGATCATGGAAAGAGCAGATGAATCTCTGTTGCCAGGAGTGTACAAAGAGGTTGGTGC
AGCTCTGCACACTGATCCAACAGGGCTTGGCTCACTCACTCTCTTTCGATCCATAGTTCA
GTCGTCATGTTATCCTCTCGCTGCTTACCTGGCTACGCATCACAACCGAGCCCACGTTAT
CGCTCTCGGTGCTTTTCTCTGGGCCGCCGCCACTTTCCTCGTTGCCATTTCCTCCACTTT
CTTCCAGGTAGCAGTCTCAAGAGGTTTGAATGGGATTGGCCTTGCCATAGTTACCCCAGC
CATTCAGTCACTTATTGCAGACTCTACTGAAGATCACAACCGAGGAGTGGCTTTTGGGTG
GCTCCAATTGACAGGAAACCTTGGCTCAATCATCGGTGGGCTCTGTTCTGTACTAATAGC
TTCAACATCATTCATGGGTATCCCTGGTTGGAGAGTTGCCTTCCATTTGGTTGGAGTAAT
AAGCGTCATAGTTGGCATTTTGGTCCGCCTCTTTGCTACTGACCCTCACTTTTCTGATGG
TAATAACTTGGCTAAAGACAAAATTCCGAGTAAACCATTTTGGTCAGAAGTGAAGGACCT
TGTTAAAGAAGCCAAGTCAGTTATAAGAATCCCATCCTTCCAGATAATTGTGGCCCAAGG
TGTCTCTGGTTCATTTCCCTGGTCGGCTTTGTCATTTGCCCCCATGTGGCTGGAGCTTAT
TGGCTTCTCTCACAAAAAGACAGCATTCCTCATGACCCTCTTTGTAATTTCTGGTTCAAT
TGGGGGCCTGTTTGGAGGAAAGATGGGGGATGTCCTTGCTAAACGTTTACCAAATTCTGG
TAGAATAATTCTTTCACAGATAAGCTCAGCTTCAGGCGTCCCTTTGGCCACAGTATTGCT
GCTGCTCTTACCTGATGATCCATCCACTGCATTCATGCATGGTTTGGTCTTGTTCATTAT
GGGGTTGTGCATATCTTGGAATCCTGCAGCAACAAACAATCCAATATTTGCAGAAATCGT
CCCTGAGAAATCTCGAACAAGCGTTTATGCTCTGGACCGATCTTTTGAGTCTATATTAGC
ATCATTTGCACCTCCTGTAGTTGGGATTTTGTCACAGCGTGTTTATGGTTATAAACCAAT
TCCAGAAGGATCGACAGACTCAGCTCAGATTGAAACGGATAGGGAGAATGCTGCATCACT
TGCCAAGGCACTTTACACTGCTATTTCTATTCCATTTGTGGTCTGTTGCCTCATCTACTC
CTTCCTGTATCGTACATATCCAAGAGACAGGGAGCGAGCTAGGATGCAAGCACTAATAGA
CTCAGAGATGCAACAGATGGACAGAGACGAACTTCCCTCGGGAGAAGAATACTCTCAGCT
TCATTTTTCAGAAACAAAGGAACCCAATGACAAGGAAAGAAGCGTGATTGAAATAGAATA
TGGAGATGAAAACCTTGATGTTGATGATAATGATAAGAAGACCCTACTTCCCAATCAGCA
AAAATTCTCACATTTGGGGGAATGATAAGCCCAAGGAGCAGCAGATGGTTTCTGATGTAT
TCGTCCTAACGAACTCAATTTTTGAAAAATTCACAACACGATCTTTCAATTCAGTTATTA
GTTTAAATATGGCCTCTTTGAGGTGTGTAACCATTTTTAGTTCCATCAATACTTCTA