Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0302g00020.t01
CDS Infomation

cds chromosome:12X:Un:22242936:22245272:1 gene:VIT_00s0302g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGGGAGGCGCAAGAAATAAGTTCAACGCCTATTACACCGAGGCCAGCCACAACTGCG
CCAACACCGCCAGTGTCTTGCCCACCCTCTCAGTTTCATTCCCCATCTTTGACGAGATCA
CCACTTCTTCACACAGACAATGAAGAAGCTCCTCAAAGCAAGACCCCAAAGGCTTCAAGA
ACCCCAAGACTCTCACTCACTCCACGCTTCATTACTCCACTGGGAAGTCCTATGAGGAGG
GTTCTTCGCCTCACAAAGCTTGATCCTCAGGACGCTTGGCTTCCTATCACTGAGTCGAGA
AATGGAAACGCCTATTACGCCGCTTTCCATACACTCTGCTCTGGCATTGGAGTTCAAGCT
CTTGTACTTCCTGTGGCCTTCACTATCCTTGGATGGACATGGGGAATAATCAATTTGACT
TTAGCATTCATATGGCAGCTATACACCCTATGGTTACTCGTCCAGCTCCACGAATCAACA
GAAACTGGGATGCGCTACAGCAGATACCTCCAACTCTTCAACGCAACCTTTGGTGAAAGG
TTAGGGAATTTGCTGGCTCTCTTCCCCATCATGTACCTCTCGGGTGGTACCTGCGTTGCC
TTGATCATCATCGGTGGTTCCACATCAAAAACCTTCTACCAAATTGTGTGTGGAGCCACA
TGCACAAAAGTGCCGTTAACCACAGTGGAATGGTACCTGGTGTTTACATGTGCCGCAGTG
TTACTTTCACAGCTACCAAACTTGAATTCCATAGCAGGGGTGTCACTGATCGGAGCCGTT
ACAGCAATAGGGTACTGCACCTCAATATGGGTGGTGTCAGTGGCAGAGGGTAGGCTCCCA
GGAGTGTCTTACAATCCAGTTAAAGAAGGCACCGATATTGAACATATTTTTAGTGTACTC
AACGCACTTGGGATCATTGCTTTTGCTTTCAGAGGCCACAATCTTATCCTCGAGATTCAG
GCCACGATGCCTTCCAGCGAGAAGCACCCATCTCGCGTGCCCATGTGGAAAGGAGTAAAG
TTTTCATACACCATCATTGCTTTGGGCTTATTTCCCCTTGCAATTGGAGGCTACTGGGCT
TATGGCCACTTGATACCTTCAAATGGAGGAATTCTGACAGCCTTGTACGTGTTCCATTCG
CAAGACGTGTCACAGTTTGTGTTGGGACTCACAAGTTTATTCATCATAGTTAATGCAGTG
AGCTCTTTCCAAATATATGGTATGCCAATGTTCGACTTCATGGAGTCCAAATACACTACT
AGAATGAAGAAGCCATGCCCCTGGTGGCTACGTTCCTTGTTCAGGGCCATGTTCGGATAC
GGGTGCTTCTTTGTAGCGGTGGCCATTCCATTCTTGGGAAGCTTGGCAGGGTTGATAGGA
GGAATAGCACTGCCTGTGACATTGGCTTATCCATGCTTCATGTGGCTTAAGATCAAGAAG
CCCAAAACGTACAGCCCAACATGGTGGCTCAACTGGGGACTAGGGGTGTTGGGCATGGGT
CTGAGTAGCGTACTAATTGCAGCCGGGATTTATGTTGTGATTGACACTGGCATTGAAGCC
AAATTCTTCCACCCTGAATAA

Peptide Sequence

PEP ID

VIT_00s0302g00020.t01
PEP Infomation

pep chromosome:12X:Un:22242936:22245272:1 gene:VIT_00s0302g00020 transcript:VIT_00s0302g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MREAQEISSTPITPRPATTAPTPPVSCPPSQFHSPSLTRSPLLHTDNEEAPQSKTPKASR
TPRLSLTPRFITPLGSPMRRVLRLTKLDPQDAWLPITESRNGNAYYAAFHTLCSGIGVQA
LVLPVAFTILGWTWGIINLTLAFIWQLYTLWLLVQLHESTETGMRYSRYLQLFNATFGER
LGNLLALFPIMYLSGGTCVALIIIGGSTSKTFYQIVCGATCTKVPLTTVEWYLVFTCAAV
LLSQLPNLNSIAGVSLIGAVTAIGYCTSIWVVSVAEGRLPGVSYNPVKEGTDIEHIFSVL
NALGIIAFAFRGHNLILEIQATMPSSEKHPSRVPMWKGVKFSYTIIALGLFPLAIGGYWA
YGHLIPSNGGILTALYVFHSQDVSQFVLGLTSLFIIVNAVSSFQIYGMPMFDFMESKYTT
RMKKPCPWWLRSLFRAMFGYGCFFVAVAIPFLGSLAGLIGGIALPVTLAYPCFMWLKIKK
PKTYSPTWWLNWGLGVLGMGLSSVLIAAGIYVVIDTGIEAKFFHPE

Transcript Sequence

Transcript ID

VIT_00s0302g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:22242936:22245272:1 gene:VIT_00s0302g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGGGAGGCGCAAGAAATAAGTTCAACGCCTATTACACCGAGGCCAGCCACAACTGCG
CCAACACCGCCAGTGTCTTGCCCACCCTCTCAGTTTCATTCCCCATCTTTGACGAGATCA
CCACTTCTTCACACAGACAATGAAGAAGCTCCTCAAAGCAAGACCCCAAAGGCTTCAAGA
ACCCCAAGACTCTCACTCACTCCACGCTTCATTACTCCACTGGGAAGTCCTATGAGGAGG
GTTCTTCGCCTCACAAAGCTTGATCCTCAGGACGCTTGGCTTCCTATCACTGAGTCGAGA
AATGGAAACGCCTATTACGCCGCTTTCCATACACTCTGCTCTGGCATTGGAGTTCAAGCT
CTTGTACTTCCTGTGGCCTTCACTATCCTTGGATGGACATGGGGAATAATCAATTTGACT
TTAGCATTCATATGGCAGCTATACACCCTATGGTTACTCGTCCAGCTCCACGAATCAACA
GAAACTGGGATGCGCTACAGCAGATACCTCCAACTCTTCAACGCAACCTTTGGTGAAAGG
TTAGGGAATTTGCTGGCTCTCTTCCCCATCATGTACCTCTCGGGTGGTACCTGCGTTGCC
TTGATCATCATCGGTGGTTCCACATCAAAAACCTTCTACCAAATTGTGTGTGGAGCCACA
TGCACAAAAGTGCCGTTAACCACAGTGGAATGGTACCTGGTGTTTACATGTGCCGCAGTG
TTACTTTCACAGCTACCAAACTTGAATTCCATAGCAGGGGTGTCACTGATCGGAGCCGTT
ACAGCAATAGGGTACTGCACCTCAATATGGGTGGTGTCAGTGGCAGAGGGTAGGCTCCCA
GGAGTGTCTTACAATCCAGTTAAAGAAGGCACCGATATTGAACATATTTTTAGTGTACTC
AACGCACTTGGGATCATTGCTTTTGCTTTCAGAGGCCACAATCTTATCCTCGAGATTCAG
GCCACGATGCCTTCCAGCGAGAAGCACCCATCTCGCGTGCCCATGTGGAAAGGAGTAAAG
TTTTCATACACCATCATTGCTTTGGGCTTATTTCCCCTTGCAATTGGAGGCTACTGGGCT
TATGGCCACTTGATACCTTCAAATGGAGGAATTCTGACAGCCTTGTACGTGTTCCATTCG
CAAGACGTGTCACAGTTTGTGTTGGGACTCACAAGTTTATTCATCATAGTTAATGCAGTG
AGCTCTTTCCAAATATATGGTATGCCAATGTTCGACTTCATGGAGTCCAAATACACTACT
AGAATGAAGAAGCCATGCCCCTGGTGGCTACGTTCCTTGTTCAGGGCCATGTTCGGATAC
GGGTGCTTCTTTGTAGCGGTGGCCATTCCATTCTTGGGAAGCTTGGCAGGGTTGATAGGA
GGAATAGCACTGCCTGTGACATTGGCTTATCCATGCTTCATGTGGCTTAAGATCAAGAAG
CCCAAAACGTACAGCCCAACATGGTGGCTCAACTGGGGACTAGGGGTGTTGGGCATGGGT
CTGAGTAGCGTACTAATTGCAGCCGGGATTTATGTTGTGATTGACACTGGCATTGAAGCC
AAATTCTTCCACCCTGAATAAG