Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0301g00170.t01
CDS Infomation

cds chromosome:12X:Un:22227204:22230598:1 gene:VIT_00s0301g00170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAAGCCGTAGTGATCACCACTCCCGGCGATCCCCAAGTTCTCCAAGTGCAAGAAGTC
GAAAACCCTGAAATCGGAGATAATGAAGTTCTAATTAGAGTGGAGGCCTCTGCTCTTAAT
CGAGCGGATACGCTTCAGAGGAAGGGCTTGCATCCTCCCCCCAAAGGCAGCAGTCCCTAC
CCCGGTCTCGAATGTTCTGGAATCATCGAAGCTGTTGGAAAGGCCGTCGTCCGATGGAAG
GTTGGCGATCAGGTGTGTGCTCTTCTTGCTGGAGGAGGGTATGCTGAAAAAGTGTCTGTT
CCAGCTGGGCAAGTTCTTCCTGTCCCATCTGGTGTTTCCCTGAAGGATGCTGCTGCTATT
CCTGAGGTTGCATGTACTGTTTGGTCAACTGTTTTTATGATGAGCCGGCTAACTGCAGGA
GAAACATTTCTGATTCATGGGGGGTCAAGTGGAATTGGTACCTTTGCTATTCAAATAGCC
AAATACATAGGAGCAAGGGTATTTGTTACAGCATCTGTTTGCAAGGATCTTGGAGCAGAT
GTGTGCATCAATTACAAGACTGAAGACTTTGTTGCACGGGTGAAGGAGGAAACAGGAGGG
AAAGGTGTTGATGTTATACTGGATAATATTGGAGGAGCCTACTTTCAGCGAAATATCGAT
AGTTTAAATGTTGATGGGAGGCTTTTTATTATTGGTTTTCAGGGTGGAACAGTTGCAGAA
GTAAATCTTTCAGGTTTACTTGCAAGGCGCCTTACAGTGCAAGCGGCTGGTTTGCGAAAC
AGAAGTCTGGAAAATAAAGCTGCAATTGTGAGTGAGGTGGAGAAGAATGTTTGGCCTGCA
ATCGCGGCTGGAAAGGTTAAGCCTGTGGTGTACAAGTATTTTCCATTGACGGAGGCAGCA
GAGGCTCACCAGCTCATGGAAAGCAGCAACCATGTTGGGAAGATACTGCTCATTCCATGA

Peptide Sequence

PEP ID

VIT_00s0301g00170.t01
PEP Infomation

pep chromosome:12X:Un:22227204:22230598:1 gene:VIT_00s0301g00170 transcript:VIT_00s0301g00170.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKAVVITTPGDPQVLQVQEVENPEIGDNEVLIRVEASALNRADTLQRKGLHPPPKGSSPY
PGLECSGIIEAVGKAVVRWKVGDQVCALLAGGGYAEKVSVPAGQVLPVPSGVSLKDAAAI
PEVACTVWSTVFMMSRLTAGETFLIHGGSSGIGTFAIQIAKYIGARVFVTASVCKDLGAD
VCINYKTEDFVARVKEETGGKGVDVILDNIGGAYFQRNIDSLNVDGRLFIIGFQGGTVAE
VNLSGLLARRLTVQAAGLRNRSLENKAAIVSEVEKNVWPAIAAGKVKPVVYKYFPLTEAA
EAHQLMESSNHVGKILLIP

Transcript Sequence

Transcript ID

VIT_00s0301g00170.t01
Transcript Infomation

cdna chromosome:12X:Un:22227204:22230598:1 gene:VIT_00s0301g00170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAACAGTCCGGCCTGCAGTCATGAAAGCCGTAGTGATCACCACTCCCGGCGATCCCCAAG
TTCTCCAAGTGCAAGAAGTCGAAAACCCTGAAATCGGAGATAATGAAGTTCTAATTAGAG
TGGAGGCCTCTGCTCTTAATCGAGCGGATACGCTTCAGAGGAAGGGCTTGCATCCTCCCC
CCAAAGGCAGCAGTCCCTACCCCGGTCTCGAATGTTCTGGAATCATCGAAGCTGTTGGAA
AGGCCGTCGTCCGATGGAAGGTTGGCGATCAGGTGTGTGCTCTTCTTGCTGGAGGAGGGT
ATGCTGAAAAAGTGTCTGTTCCAGCTGGGCAAGTTCTTCCTGTCCCATCTGGTGTTTCCC
TGAAGGATGCTGCTGCTATTCCTGAGGTTGCATGTACTGTTTGGTCAACTGTTTTTATGA
TGAGCCGGCTAACTGCAGGAGAAACATTTCTGATTCATGGGGGGTCAAGTGGAATTGGTA
CCTTTGCTATTCAAATAGCCAAATACATAGGAGCAAGGGTATTTGTTACAGCATCTGTTT
GCAAGGATCTTGGAGCAGATGTGTGCATCAATTACAAGACTGAAGACTTTGTTGCACGGG
TGAAGGAGGAAACAGGAGGGAAAGGTGTTGATGTTATACTGGATAATATTGGAGGAGCCT
ACTTTCAGCGAAATATCGATAGTTTAAATGTTGATGGGAGGCTTTTTATTATTGGTTTTC
AGGGTGGAACAGTTGCAGAAGTAAATCTTTCAGGTTTACTTGCAAGGCGCCTTACAGTGC
AAGCGGCTGGTTTGCGAAACAGAAGTCTGGAAAATAAAGCTGCAATTGTGAGTGAGGTGG
AGAAGAATGTTTGGCCTGCAATCGCGGCTGGAAAGGTTAAGCCTGTGGTGTACAAGTATT
TTCCATTGACGGAGGCAGCAGAGGCTCACCAGCTCATGGAAAGCAGCAACCATGTTGGGA
AGATACTGCTCATTCCATGATGTTATGGGTATGAATGGTCTTATGCCTTAAAGAGGATGA
CATGGTTTTATAACTCTTAGTGTGCATCTACACTATCTGATACAATGTGTGATTGGCAGG
TGTAGATGGTCAATGCTTATTTTCTTATGTAGCCCTGTCATTTGAGAATAAAAACCAGCC
TTCTCGTCCAAACA