Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0299g00060.t01
CDS Infomation

cds chromosome:12X:Un:22067145:22071070:1 gene:VIT_00s0299g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACTCGCCGCTGCTCGCATTGCAGTCACAACGGGCACAATTCCAGGACATGCCCCAAC
CGCGGGGTCAAGATCTTCGGGGTTCGATTGACTGATGGGTTGATCCGTAAGAGTGCTAGT
ATGGGCAATCTCAGCCACTACGCCGGGTCGACCTCTGGTCATCATCAGAACGGCGTTTCC
GGTAACAATTCGGTCTCTCCCGGAGAGACTCCAGAGCACGGCGCCGCGGCCGATGGATAC
GCCTCCGAGGGTTTCGTTCCCGGTTCATCATCCAGCCGGGAGCGCAAGAAAGGCACTCCA
TGGACTGAAGAGGAACACAGAATGTTTCTACTTGGACTGCAGAAGCTTGGAAAAGGGGAT
TGGCGTGGAATTTCACGTAATTATGTTATATCAAGGACACCTACTCAAGTCGCCAGCCAT
GCTCAGAAATATTTCATCAGGCAAACCAATGTGTCTAGGAGAAAAAGACGGTCCAGCTTG
TTTGATATTGTAGCTGATGAATCTGTTGACACTCCAATGGTATCACGGGATTTCTTCTCC
ACCAACCCTTCGCAAGCTGAAACACTAAGCAATAACCCATTGCCTGTTCCTCCGGCTCTG
GATGAAGAATGTGAATCAATGGATTCTACCAACTCGAATGATGGAGAACCACCCATTCCA
AAGCCGGATGGCTTACAAGGCTGTCCCCCAGTAATATATCCTACTTATTTCTCGCCATTC
TTCCCATTTTCTTTTCCATTCTGGCCGGGAAACAGTTCAGAGCCAACTAAAATGGAGACT
CATGAGGTGCTTAAGCCAACAGCTGTACATTCTAAGAGTCCAATCAATGTTGATGAGCTG
GTTGGCATGTCAAAACTGAGTTTAGGAGAATCCATCGGTCATGCTGGTCCCTCCTCTCTC
ACACTGAAACTGCTTGAAGGGTCAAGCAGGCAATCTGCTTTCCATGCTAATCCAGCCTCT
GGCAGTTCAAGCATGAACTCGAGCGGCAGTCCAATCCATGCAGTTTGA

Peptide Sequence

PEP ID

VIT_00s0299g00060.t01
PEP Infomation

pep chromosome:12X:Un:22067145:22071070:1 gene:VIT_00s0299g00060 transcript:VIT_00s0299g00060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTRRCSHCSHNGHNSRTCPNRGVKIFGVRLTDGLIRKSASMGNLSHYAGSTSGHHQNGVS
GNNSVSPGETPEHGAAADGYASEGFVPGSSSSRERKKGTPWTEEEHRMFLLGLQKLGKGD
WRGISRNYVISRTPTQVASHAQKYFIRQTNVSRRKRRSSLFDIVADESVDTPMVSRDFFS
TNPSQAETLSNNPLPVPPALDEECESMDSTNSNDGEPPIPKPDGLQGCPPVIYPTYFSPF
FPFSFPFWPGNSSEPTKMETHEVLKPTAVHSKSPINVDELVGMSKLSLGESIGHAGPSSL
TLKLLEGSSRQSAFHANPASGSSSMNSSGSPIHAV

Transcript Sequence

Transcript ID

VIT_00s0299g00060.t01
Transcript Infomation

cdna chromosome:12X:Un:22067145:22071070:1 gene:VIT_00s0299g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGATCATGTGAGACCCGTTTCCCGAGATCCGAATCTCAGCTCTTGCAATCTGTAATCTAC
AATACACAATCCGCTATCCGATCTGCTTCAGTTTGATTTCTGGAACCATGACTCGCCGCT
GCTCGCATTGCAGTCACAACGGGCACAATTCCAGGACATGCCCCAACCGCGGGGTCAAGA
TCTTCGGGGTTCGATTGACTGATGGGTTGATCCGTAAGAGTGCTAGTATGGGCAATCTCA
GCCACTACGCCGGGTCGACCTCTGGTCATCATCAGAACGGCGTTTCCGGTAACAATTCGG
TCTCTCCCGGAGAGACTCCAGAGCACGGCGCCGCGGCCGATGGATACGCCTCCGAGGGTT
TCGTTCCCGGTTCATCATCCAGCCGGGAGCGCAAGAAAGGCACTCCATGGACTGAAGAGG
AACACAGAATGTTTCTACTTGGACTGCAGAAGCTTGGAAAAGGGGATTGGCGTGGAATTT
CACGTAATTATGTTATATCAAGGACACCTACTCAAGTCGCCAGCCATGCTCAGAAATATT
TCATCAGGCAAACCAATGTGTCTAGGAGAAAAAGACGGTCCAGCTTGTTTGATATTGTAG
CTGATGAATCTGTTGACACTCCAATGGTATCACGGGATTTCTTCTCCACCAACCCTTCGC
AAGCTGAAACACTAAGCAATAACCCATTGCCTGTTCCTCCGGCTCTGGATGAAGAATGTG
AATCAATGGATTCTACCAACTCGAATGATGGAGAACCACCCATTCCAAAGCCGGATGGCT
TACAAGGCTGTCCCCCAGTAATATATCCTACTTATTTCTCGCCATTCTTCCCATTTTCTT
TTCCATTCTGGCCGGGAAACAGTTCAGAGCCAACTAAAATGGAGACTCATGAGGTGCTTA
AGCCAACAGCTGTACATTCTAAGAGTCCAATCAATGTTGATGAGCTGGTTGGCATGTCAA
AACTGAGTTTAGGAGAATCCATCGGTCATGCTGGTCCCTCCTCTCTCACACTGAAACTGC
TTGAAGGGTCAAGCAGGCAATCTGCTTTCCATGCTAATCCAGCCTCTGGCAGTTCAAGCA
TGAACTCGAGCGGCAGTCCAATCCATGCAGTTTGATTAGTAGCTGATCCAAGCAGCCCAA
TGGGAAGATTCTGCTGGTATGGAGATTGTAGGTCAGCTCAGTGCTGGTGAGCTCTGCAAA
TTTCCTGTTAATACAAGATGAATAATGTGCAGTCTGGTTTGGATTTGTTTATCTCTCTAT
GTGGGAACACGCTTTAATAAGTTTGATTTTAGAAATTAACTTAATCCAGTTCTTTTAATC
CAGTTCTTACCTTGTAGGTTATAGTTCCTTTTATCAGAAATCATTTAAATCT