Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0299g00030.t01
CDS Infomation

cds chromosome:12X:Un:22036291:22055893:1 gene:VIT_00s0299g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCAATACCAAAGAATGGCAATAAACTTCGGTGTCGTCTGTACTATGAGTGCATAGAG
GCTGGCCTTATCTCCAAAAGATATGATGATAGATTCCAGGAGAAAGATGATAGCGAGAAG
CAACAGACTGCTGATGTACAACGCCTTTATTCTTTGTTTGATGTTGCCATGGAGAACAAC
TTGGTTTCTTTGATTTGCCATTATGTTACAGATGTTTGTATGGACGAAAGTGCTGTCTCC
AGTGATCCTGTCATTGCTTTTTTGTTGGATGAAGTGGTTGTCAAAGATTGGTGCAAGCGG
ACGTTCAGAAACATTATAACAGAACTTCAAGGGATTTACAATCTTGAAGTAGAAGAGATG
AAAACAAGGTTGAGTTTACTTCTTAAGTTTTCAGTACAGCTGGCTGGTGTGGCCAGTGTC
CTCGAAGTTCTGGAGTCATCTTTCAAGGGTACAATTTCATCCCAGCTTCATGACTTGCAT
CAGCTTCAGGAGAGCATATTAAAGACAAAACAGCACATGGAGATTATGATTTGGTGTATA
AGACATCAGTTTCTCGAGAATGTTAGGTCTCGTTATTCTAAATTTTCATCATGGCGTTCT
CTGGTTCGTGAAAGGAAATCAGCTGCGATTCAGCGCTCATGGCCTGATTCAGTAGATCAC
ACTGCAGAGCCCACAAAAGAATGTGGAACCCTCTTCATTGAAGATGCATTGTTAAATCTT
GAGATAGATCAAGGACGTGCACAGGAAATGGGAGAGGAATCAGAAGTCGCATCCTTGCAG
AAGGATGGAGGTTCCACATTTTTCAGGTCTAAGATTGAAGGATTGGCAGGATGCTATCCA
TTTGAAAATATGCGAGCTGCTGCAGACATATTATTTTTAAGTGGAAGTTCTGACTTGGTG
GTTGCGAAACAAGCAATTTTTCTGTATTACTTGTTTGATCGCCATTGGACAATGCCTGAC
GAAAAATGGAGACACATTGTAGATGATTTTGCAGCTACATTTAGCATAACCCGGCATTCC
TTATTGGAATCCTTTACTTTTTATCTTCTGGATGATCATACAGATGAAGCTCTGCAGGAA
GCTTGCCTGCTTCTTCCAGAGATCTCAGGCCCAGGAACTCATCCTAAGATCGCACAAGTT
TTGTTGGAAAGGCAAAATCCTGATGCTGCTCTTATGGTTTTACGGTGGTCTGGGCATGAT
GGGGGATCTCAGTTGGTTTCACTTGGTGAAGCAGTCAATGCAGCTCGGGTGAGAGTGGAG
TGTGCACTTGTGACTGAAGCATTTATGTACCAGAGATTGCTCTGCACAAAAATCAAGGAA
AAGCAGTTACGGGATGGATTGGCTAGCAATGTTCCAGAGGTTTCAAAAGGTGAATCTAGA
ACTTGGATGGATTGGATGGAGACACTGGTGACTGAAATTTGTTGTCTTTGTATCCGGAGG
GGCTTGGTGGATAGAATGATAGAGTTGCCATGGAATTTTGATGAGGAGAAATGTCTCCAT
AAATGCCTGTTAGAGTATGCCATTGATGACCCTTCAACAATTGTTGGAAGTCTTCTTGTT
GTTTTCTATCTTCAGCGGTACCGGTATACTGAAGCATACCAAGTTGATCGTAAACTTCAG
AGTGTGGAGCAGGACTTCATTTCAAAAAGTTCTGTCCAGGAAGAGGTCTTAACCAGAATG
AAATCAACAAGTCACTGGAGATCGGGATTGGTTGATAAAAGCATGGAGTTGCTGCCAGAG
GGGCAACGGCAGCAAGTTAAAACTGGAAAGTTGCTTGATATTTCTGCTGCTTCTGATAAT
GAATATCAAATCCAAACATCTGATATTCCCAAGATACCAGAACCTAATTCATCACTTTTG
TTGCTTCCTACTTCCACCATTTCTTCCCTTGCTCCTCGAATGGATCATATGGTATCACCC
TCAAAACCATCAGTTTTTGAAACTCCATCAAAACTGGGTGGAGCTGTCAACAATTCCCGC
TTCGGACTTGGTAACTACAACTCTCCATCCATTTTTCATGGGAGTTCCTTTACCAATATA
GAAAGAGGACAGAAGCCTCAAACTGGAATCAGCACAAATTTCAAATTTGATGACATCTCA
ACTCCTCAAGGTCTTCGTCGTTTTAGTCCTACGAATGCTTCATTAAAAGAAATCAACCGA
AGTTCGTCAAGAGTGCTTCAAAAGAGCAACTTCCAAGGCAATCAATTTGATAAAGTATCA
CCAGAAGCAGAACAAGATGGGTTCACAAACGAATTCAAAAGTACCAGTCCTCCATCCCGC
AGAATTACGGCTAATCCAGCTACTACACCAGGCAGTGAGCATGGCTTGTTTAAAGATGCT
GCTCAAGACCTGAACCCAAATATATCTGGTAAGCGTGTCTTGTCAGACGGACCAGATAGA
CCTTGGAGTGTGGTTCCCTCTAGTAATGCAATGGAAGTGTCTTGGAGCTATCAAGACAAC
GGTTCAGCTGTTGATGAAATGAACGTCAATGGTGGCCCTAGGTGGAGATCTGATGAAATG
AGTGAGGGTGAAGAGAAGCAGAGTCCAGAGAGAGTTATAGGTGTAGGTTCTTATACTACT
CCGGCGAGGGGAATTAGAAGAATCAGGTTGTCCAGAAGATGA

Peptide Sequence

PEP ID

VIT_00s0299g00030.t01
PEP Infomation

pep chromosome:12X:Un:22036291:22055893:1 gene:VIT_00s0299g00030 transcript:VIT_00s0299g00030.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPIPKNGNKLRCRLYYECIEAGLISKRYDDRFQEKDDSEKQQTADVQRLYSLFDVAMENN
LVSLICHYVTDVCMDESAVSSDPVIAFLLDEVVVKDWCKRTFRNIITELQGIYNLEVEEM
KTRLSLLLKFSVQLAGVASVLEVLESSFKGTISSQLHDLHQLQESILKTKQHMEIMIWCI
RHQFLENVRSRYSKFSSWRSLVRERKSAAIQRSWPDSVDHTAEPTKECGTLFIEDALLNL
EIDQGRAQEMGEESEVASLQKDGGSTFFRSKIEGLAGCYPFENMRAAADILFLSGSSDLV
VAKQAIFLYYLFDRHWTMPDEKWRHIVDDFAATFSITRHSLLESFTFYLLDDHTDEALQE
ACLLLPEISGPGTHPKIAQVLLERQNPDAALMVLRWSGHDGGSQLVSLGEAVNAARVRVE
CALVTEAFMYQRLLCTKIKEKQLRDGLASNVPEVSKGESRTWMDWMETLVTEICCLCIRR
GLVDRMIELPWNFDEEKCLHKCLLEYAIDDPSTIVGSLLVVFYLQRYRYTEAYQVDRKLQ
SVEQDFISKSSVQEEVLTRMKSTSHWRSGLVDKSMELLPEGQRQQVKTGKLLDISAASDN
EYQIQTSDIPKIPEPNSSLLLLPTSTISSLAPRMDHMVSPSKPSVFETPSKLGGAVNNSR
FGLGNYNSPSIFHGSSFTNIERGQKPQTGISTNFKFDDISTPQGLRRFSPTNASLKEINR
SSSRVLQKSNFQGNQFDKVSPEAEQDGFTNEFKSTSPPSRRITANPATTPGSEHGLFKDA
AQDLNPNISGKRVLSDGPDRPWSVVPSSNAMEVSWSYQDNGSAVDEMNVNGGPRWRSDEM
SEGEEKQSPERVIGVGSYTTPARGIRRIRLSRR

Transcript Sequence

Transcript ID

VIT_00s0299g00030.t01
Transcript Infomation

cdna chromosome:12X:Un:22036291:22055893:1 gene:VIT_00s0299g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTCAGGAAGCCTTGGAGCACTTGGCATCCATTGATCTGATTGAGTTGTGCAATGAGGCAA
AAGTTGAGCGCTGTCGGGCAACCAGAGACTTGAGTAGTTGTGGACGTTATGTACAGCATG
TGTTGAACTCTTGTGGACATGCCTCCTTATGTGCAGAATGTAGTCAACGGTGTGATGTTT
GCCCAATTTGTAGAATGCCAATACCAAAGAATGGCAATAAACTTCGGTGTCGTCTGTACT
ATGAGTGCATAGAGGCTGGCCTTATCTCCAAAAGATATGATGATAGATTCCAGGAGAAAG
ATGATAGCGAGAAGCAACAGACTGCTGATGTACAACGCCTTTATTCTTTGTTTGATGTTG
CCATGGAGAACAACTTGGTTTCTTTGATTTGCCATTATGTTACAGATGTTTGTATGGACG
AAAGTGCTGTCTCCAGTGATCCTGTCATTGCTTTTTTGTTGGATGAAGTGGTTGTCAAAG
ATTGGTGCAAGCGGACGTTCAGAAACATTATAACAGAACTTCAAGGGATTTACAATCTTG
AAGTAGAAGAGATGAAAACAAGGTTGAGTTTACTTCTTAAGTTTTCAGTACAGCTGGCTG
GTGTGGCCAGTGTCCTCGAAGTTCTGGAGTCATCTTTCAAGGGTACAATTTCATCCCAGC
TTCATGACTTGCATCAGCTTCAGGAGAGCATATTAAAGACAAAACAGCACATGGAGATTA
TGATTTGGTGTATAAGACATCAGTTTCTCGAGAATGTTAGGTCTCGTTATTCTAAATTTT
CATCATGGCGTTCTCTGGTTCGTGAAAGGAAATCAGCTGCGATTCAGCGCTCATGGCCTG
ATTCAGTAGATCACACTGCAGAGCCCACAAAAGAATGTGGAACCCTCTTCATTGAAGATG
CATTGTTAAATCTTGAGATAGATCAAGGACGTGCACAGGAAATGGGAGAGGAATCAGAAG
TCGCATCCTTGCAGAAGGATGGAGGTTCCACATTTTTCAGGTCTAAGATTGAAGGATTGG
CAGGATGCTATCCATTTGAAAATATGCGAGCTGCTGCAGACATATTATTTTTAAGTGGAA
GTTCTGACTTGGTGGTTGCGAAACAAGCAATTTTTCTGTATTACTTGTTTGATCGCCATT
GGACAATGCCTGACGAAAAATGGAGACACATTGTAGATGATTTTGCAGCTACATTTAGCA
TAACCCGGCATTCCTTATTGGAATCCTTTACTTTTTATCTTCTGGATGATCATACAGATG
AAGCTCTGCAGGAAGCTTGCCTGCTTCTTCCAGAGATCTCAGGCCCAGGAACTCATCCTA
AGATCGCACAAGTTTTGTTGGAAAGGCAAAATCCTGATGCTGCTCTTATGGTTTTACGGT
GGTCTGGGCATGATGGGGGATCTCAGTTGGTTTCACTTGGTGAAGCAGTCAATGCAGCTC
GGGTGAGAGTGGAGTGTGCACTTGTGACTGAAGCATTTATGTACCAGAGATTGCTCTGCA
CAAAAATCAAGGAAAAGCAGTTACGGGATGGATTGGCTAGCAATGTTCCAGAGGTTTCAA
AAGGTGAATCTAGAACTTGGATGGATTGGATGGAGACACTGGTGACTGAAATTTGTTGTC
TTTGTATCCGGAGGGGCTTGGTGGATAGAATGATAGAGTTGCCATGGAATTTTGATGAGG
AGAAATGTCTCCATAAATGCCTGTTAGAGTATGCCATTGATGACCCTTCAACAATTGTTG
GAAGTCTTCTTGTTGTTTTCTATCTTCAGCGGTACCGGTATACTGAAGCATACCAAGTTG
ATCGTAAACTTCAGAGTGTGGAGCAGGACTTCATTTCAAAAAGTTCTGTCCAGGAAGAGG
TCTTAACCAGAATGAAATCAACAAGTCACTGGAGATCGGGATTGGTTGATAAAAGCATGG
AGTTGCTGCCAGAGGGGCAACGGCAGCAAGTTAAAACTGGAAAGTTGCTTGATATTTCTG
CTGCTTCTGATAATGAATATCAAATCCAAACATCTGATATTCCCAAGATACCAGAACCTA
ATTCATCACTTTTGTTGCTTCCTACTTCCACCATTTCTTCCCTTGCTCCTCGAATGGATC
ATATGGTATCACCCTCAAAACCATCAGTTTTTGAAACTCCATCAAAACTGGGTGGAGCTG
TCAACAATTCCCGCTTCGGACTTGGTAACTACAACTCTCCATCCATTTTTCATGGGAGTT
CCTTTACCAATATAGAAAGAGGACAGAAGCCTCAAACTGGAATCAGCACAAATTTCAAAT
TTGATGACATCTCAACTCCTCAAGGTCTTCGTCGTTTTAGTCCTACGAATGCTTCATTAA
AAGAAATCAACCGAAGTTCGTCAAGAGTGCTTCAAAAGAGCAACTTCCAAGGCAATCAAT
TTGATAAAGTATCACCAGAAGCAGAACAAGATGGGTTCACAAACGAATTCAAAAGTACCA
GTCCTCCATCCCGCAGAATTACGGCTAATCCAGCTACTACACCAGGCAGTGAGCATGGCT
TGTTTAAAGATGCTGCTCAAGACCTGAACCCAAATATATCTGGTAAGCGTGTCTTGTCAG
ACGGACCAGATAGACCTTGGAGTGTGGTTCCCTCTAGTAATGCAATGGAAGTGTCTTGGA
GCTATCAAGACAACGGTTCAGCTGTTGATGAAATGAACGTCAATGGTGGCCCTAGGTGGA
GATCTGATGAAATGAGTGAGGGTGAAGAGAAGCAGAGTCCAGAGAGAGTTATAGGTGTAG
GTTCTTATACTACTCCGGCGAGGGGAATTAGAAGAATCAGGTTGTCCAGAAGATGAAGAT
GGTTGCTCGTTTCCATGGATGTGAAAGAGGAAAACTGCAATAACTTGTAGAAGAGAAGGA
AACCGGTTAACTTTTTAGGCAAGAGCTACGCTTCTCAAATTACATGGAACGGAAGAGCAG
CATGCTGCTATTTCTTATACTGGTTTATAGTTGTAGCCGCATGCAGCTGAGTCTTTATTT
TCAAGGAACTGCTAGATTTGATTAGCTATTTCCCCTTTACTAAGTTAATTATTTTGGGGG
AACACAGTTTTCATGGGTTTTGGTCACATTTTTGTATCTTCATGGAATTAATTGAAAGTC
AGA