Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0287g00040.t01
CDS Infomation

cds chromosome:12X:Un:21555825:21559859:-1 gene:VIT_00s0287g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGATGATGCTGAGGACTACAGGGTTTCCAGAGGACAAGTCTCAGCATGAAAAATTG
CAAATCCTAGCAAATCATAATTCACCTCTGCGTTCCATAGATCTAAAAGATGTAGTTAAC
TTCGAGGAGTTTGTTGGACATTTGACAAATGAAGAGCAGCTGCAGTTACTGAAGTATCTA
CCTTCAGAGGATACTGCCAAACTTCCTGACAGTCTTAAAAGCATGTTCGACAGCCCTCAG
TTCAAGGAAAGCCTTTCTTTCTTCCAGCAGCTGCTTGGGGAAGGGGTCTTTGATATCTCT
TTCCCAGGGGTGAAAGCTGAAGACTGTAAGACTTTGCAGAGGCTTGCATTGTTGAATTCT
GAAAAATCCAAATGGGTGGAACACTATAATTTACTTAAGAAATGTAAGAATAGTACTGGA
GTGTCTGTAGTTGCGGGAGAACCTAAGGCCATTGCAGCAAGTAATTTTGCAAATGCCAAG
AGATCTCGTGATGCCCAAAATCAAAATTTTTCAGAAGCAAGAACTACGATGAAGAGCCCC
AGAAGGGTGATTATGAAGGCAGTAGAAAAGGAACATATAGACAATGAAGGCTCTAGCTTC
AGTCCTAGAAGTCTATTTGCCTTGCCTCCTGATGGTGGCTCTCTTGAGCTGGATTCATTC
ACCTTTGGTGATGAAATTTCTGATCATGATCTACTGCTGGATGTGCCATCCAACAACTCA
TTCCCACAGGCAGAGCTCCTTCATCCAGGTTCGGGCTTTGGCACCCAACTGCAAAGCACT
AGTAGTAGCTCAGCATACCCACATCTTTTGCGTCCCTGA

Peptide Sequence

PEP ID

VIT_00s0287g00040.t01
PEP Infomation

pep chromosome:12X:Un:21555825:21559859:-1 gene:VIT_00s0287g00040 transcript:VIT_00s0287g00040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVMMLRTTGFPEDKSQHEKLQILANHNSPLRSIDLKDVVNFEEFVGHLTNEEQLQLLKYL
PSEDTAKLPDSLKSMFDSPQFKESLSFFQQLLGEGVFDISFPGVKAEDCKTLQRLALLNS
EKSKWVEHYNLLKKCKNSTGVSVVAGEPKAIAASNFANAKRSRDAQNQNFSEARTTMKSP
RRVIMKAVEKEHIDNEGSSFSPRSLFALPPDGGSLELDSFTFGDEISDHDLLLDVPSNNS
FPQAELLHPGSGFGTQLQSTSSSSAYPHLLRP

Transcript Sequence

Transcript ID

VIT_00s0287g00040.t01
Transcript Infomation

cdna chromosome:12X:Un:21555825:21559859:-1 gene:VIT_00s0287g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CACCCCGCTTTGGCGCAATGGGCCTCCAGAGAAGCCAGTACTCTGCAATGCCTGTGGATC
CCGATGGAGGACAAAAGGAACCCTTGAAAACTATACCCCTCTACATGCAAGGGTAGATGG
TGATGATGCTGAGGACTACAGGGTTTCCAGAGGACAAGTCTCAGCATGAAAAATTGCAAA
TCCTAGCAAATCATAATTCACCTCTGCGTTCCATAGATCTAAAAGATGTAGTTAACTTCG
AGGAGTTTGTTGGACATTTGACAAATGAAGAGCAGCTGCAGTTACTGAAGTATCTACCTT
CAGAGGATACTGCCAAACTTCCTGACAGTCTTAAAAGCATGTTCGACAGCCCTCAGTTCA
AGGAAAGCCTTTCTTTCTTCCAGCAGCTGCTTGGGGAAGGGGTCTTTGATATCTCTTTCC
CAGGGGTGAAAGCTGAAGACTGTAAGACTTTGCAGAGGCTTGCATTGTTGAATTCTGAAA
AATCCAAATGGGTGGAACACTATAATTTACTTAAGAAATGTAAGAATAGTACTGGAGTGT
CTGTAGTTGCGGGAGAACCTAAGGCCATTGCAGCAAGTAATTTTGCAAATGCCAAGAGAT
CTCGTGATGCCCAAAATCAAAATTTTTCAGAAGCAAGAACTACGATGAAGAGCCCCAGAA
GGGTGATTATGAAGGCAGTAGAAAAGGAACATATAGACAATGAAGGCTCTAGCTTCAGTC
CTAGAAGTCTATTTGCCTTGCCTCCTGATGGTGGCTCTCTTGAGCTGGATTCATTCACCT
TTGGTGATGAAATTTCTGATCATGATCTACTGCTGGATGTGCCATCCAACAACTCATTCC
CACAGGCAGAGCTCCTTCATCCAGGTTCGGGCTTTGGCACCCAACTGCAAAGCACTAGTA
GTAGCTCAGCATACCCACATCTTTTGCGTCCCTGA