Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0283g00030.t01
CDS Infomation

cds chromosome:12X:Un:21173412:21176682:-1 gene:VIT_00s0283g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAGAAGGGAAACGAGTTTCTCTGCTACCCCTATATGTTGTGTTTGCTGTAATAGCT
TGCGCATCACTTCAGCTATGCGCTTCTGATTCTATCTTCTACGAGTCTTTCGACGACGAT
TTTGAAGGGCGTTGGATCGTTTCTGAGAAAGAAGACTATAAAGGTGTATGGAAACATGCA
AAGAGTGACGGACATGAGGATCATGGGCTTCTTGTGAGTGAGAAAGCTAGGAAGTATGCT
ATAGTGAAAGAGCTTGATGAGGCAGTGAGTCTAAAGGATGGAACTGCTGTTCTCCAGTTT
GAGACTAGGCTCCAGAATGGGCTTGAGTGTGGTGGTGCATATCTAAAATATCTTCGACCT
CAGGATGCTACATGGAAATCCAAAGAATTTGACAATGAATCTCCCTATTCTATCATGTTT
GGACCTGACAAATGTGGGTCTACAAACAAGGTGCACTTTATCGTAAAGCATAAGAACCCG
AAGAGTGGGGAATACATTGAACACCATCTCAAGTATCCACCCTCTGTTCCATCTGACAAA
TTATCTCATGTCTATACTGCGATTTTGAAGCCTGATCATGAGGTGCGAATTCTGATTGAT
GGTGAGGAAAAGAAGAAGGCAAATTTCCTCTCATCTGAAGATTTTGAGCCTCCATTTATC
CCTGCTAAGACCATTCCTGACCCAGATGATAAGAAACCAGAGGATTGGGATGAGAGGCCA
AAAATTCCAGACCCCAATGCGGTAAAGCCTGATGACTGGGATGAGGATGCACCCATGGAA
ATTGAAGATGAAGAAGCAGTAAAACCTGAAGGATGGTTGGATGATGAACCTGAGGAGATA
GATGATCCCGAAGCCTCCAAACCAGAAGATTGGGATGATGAGGAGGATGGTGAATGGGAG
GCACCAAAGATAGATAACCCAAAGTGTGAGATTGCACCTGGTTGTGGTGAATGGAAGAAG
CCATTGAAGAGGAATCCAGCTTACAAGGGGAAATGGCATGCCCCTCTTATTGACAACCCC
AATTACAAGGGTATTTGGAAGCCTCAGCAGATTCCAAACCCTGACTATTTTGAACTTGAT
CATCCTGACATTGAGCCTGTTGCTGCCATTGGCATTGAGATTTGGACAATGCAGGATGGT
ATATTGTTTGACAATATTTTGATAACTAGTGATGAGAAGACTGCAGAATCATATCGGGAG
ACCACATGGAAGCCAAAATTTGAAGTTGAGAAAGAGAAACAGAAAGCTGAGGATGCAGCT
GCTGGTTTTGATGTTCCCTCAGGCTTCCAGAAGAAGGTATTTGACCTCCTCTACAAGATT
GCGGATATTTCCTTCTTAAATGCATATAAACCCAAGCTTTTGGATCTAATTGAGAAGGGA
GAGAAACAACCAAACCTCACGATTGGAATCCTTGTCTCCATTGTCATCGTTTTCTTGACT
ATTATCTTTAAGATCATTTTTGGTGGGAAGAAGCCGGTGAAAATCACCAGGCAAACAAAT
AACTCAACAGTTGCTGAGACATCAAATGATCAAGGAAGCAGCAGAGAGAAAGAAGAAGAG
AATGAGGAGGAAGATACTAATGCTCCTCCTCGAAAGAGGTCTACGAGGCGCGAAAATTGA

Peptide Sequence

PEP ID

VIT_00s0283g00030.t01
PEP Infomation

pep chromosome:12X:Un:21173412:21176682:-1 gene:VIT_00s0283g00030 transcript:VIT_00s0283g00030.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGEGKRVSLLPLYVVFAVIACASLQLCASDSIFYESFDDDFEGRWIVSEKEDYKGVWKHA
KSDGHEDHGLLVSEKARKYAIVKELDEAVSLKDGTAVLQFETRLQNGLECGGAYLKYLRP
QDATWKSKEFDNESPYSIMFGPDKCGSTNKVHFIVKHKNPKSGEYIEHHLKYPPSVPSDK
LSHVYTAILKPDHEVRILIDGEEKKKANFLSSEDFEPPFIPAKTIPDPDDKKPEDWDERP
KIPDPNAVKPDDWDEDAPMEIEDEEAVKPEGWLDDEPEEIDDPEASKPEDWDDEEDGEWE
APKIDNPKCEIAPGCGEWKKPLKRNPAYKGKWHAPLIDNPNYKGIWKPQQIPNPDYFELD
HPDIEPVAAIGIEIWTMQDGILFDNILITSDEKTAESYRETTWKPKFEVEKEKQKAEDAA
AGFDVPSGFQKKVFDLLYKIADISFLNAYKPKLLDLIEKGEKQPNLTIGILVSIVIVFLT
IIFKIIFGGKKPVKITRQTNNSTVAETSNDQGSSREKEEENEEEDTNAPPRKRSTRREN

Transcript Sequence

Transcript ID

VIT_00s0283g00030.t01
Transcript Infomation

cdna chromosome:12X:Un:21173412:21176682:-1 gene:VIT_00s0283g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAAGAGCAAACGAGAGAAAAAAAGTAGGTTGAGGGTTTGGGAGTTTGAGAGATGGGAGA
AGGGAAACGAGTTTCTCTGCTACCCCTATATGTTGTGTTTGCTGTAATAGCTTGCGCATC
ACTTCAGCTATGCGCTTCTGATTCTATCTTCTACGAGTCTTTCGACGACGATTTTGAAGG
GCGTTGGATCGTTTCTGAGAAAGAAGACTATAAAGGTGTATGGAAACATGCAAAGAGTGA
CGGACATGAGGATCATGGGCTTCTTGTGAGTGAGAAAGCTAGGAAGTATGCTATAGTGAA
AGAGCTTGATGAGGCAGTGAGTCTAAAGGATGGAACTGCTGTTCTCCAGTTTGAGACTAG
GCTCCAGAATGGGCTTGAGTGTGGTGGTGCATATCTAAAATATCTTCGACCTCAGGATGC
TACATGGAAATCCAAAGAATTTGACAATGAATCTCCCTATTCTATCATGTTTGGACCTGA
CAAATGTGGGTCTACAAACAAGGTGCACTTTATCGTAAAGCATAAGAACCCGAAGAGTGG
GGAATACATTGAACACCATCTCAAGTATCCACCCTCTGTTCCATCTGACAAATTATCTCA
TGTCTATACTGCGATTTTGAAGCCTGATCATGAGGTGCGAATTCTGATTGATGGTGAGGA
AAAGAAGAAGGCAAATTTCCTCTCATCTGAAGATTTTGAGCCTCCATTTATCCCTGCTAA
GACCATTCCTGACCCAGATGATAAGAAACCAGAGGATTGGGATGAGAGGCCAAAAATTCC
AGACCCCAATGCGGTAAAGCCTGATGACTGGGATGAGGATGCACCCATGGAAATTGAAGA
TGAAGAAGCAGTAAAACCTGAAGGATGGTTGGATGATGAACCTGAGGAGATAGATGATCC
CGAAGCCTCCAAACCAGAAGATTGGGATGATGAGGAGGATGGTGAATGGGAGGCACCAAA
GATAGATAACCCAAAGTGTGAGATTGCACCTGGTTGTGGTGAATGGAAGAAGCCATTGAA
GAGGAATCCAGCTTACAAGGGGAAATGGCATGCCCCTCTTATTGACAACCCCAATTACAA
GGGTATTTGGAAGCCTCAGCAGATTCCAAACCCTGACTATTTTGAACTTGATCATCCTGA
CATTGAGCCTGTTGCTGCCATTGGCATTGAGATTTGGACAATGCAGGATGGTATATTGTT
TGACAATATTTTGATAACTAGTGATGAGAAGACTGCAGAATCATATCGGGAGACCACATG
GAAGCCAAAATTTGAAGTTGAGAAAGAGAAACAGAAAGCTGAGGATGCAGCTGCTGGTTT
TGATGTTCCCTCAGGCTTCCAGAAGAAGGTATTTGACCTCCTCTACAAGATTGCGGATAT
TTCCTTCTTAAATGCATATAAACCCAAGCTTTTGGATCTAATTGAGAAGGGAGAGAAACA
ACCAAACCTCACGATTGGAATCCTTGTCTCCATTGTCATCGTTTTCTTGACTATTATCTT
TAAGATCATTTTTGGTGGGAAGAAGCCGGTGAAAATCACCAGGCAAACAAATAACTCAAC
AGTTGCTGAGACATCAAATGATCAAGGAAGCAGCAGAGAGAAAGAAGAAGAGAATGAGGA
GGAAGATACTAATGCTCCTCCTCGAAAGAGGTCTACGAGGCGCGAAAATTGATTTAAAAG
GAAAAAATTAGGACAAGAGGATATTATTTTCTCACTTTTGGTAAATTTTGGGATAGTAGG
CTTTACTGGCTGAACATCTTGTTTGTGATTTTTGTTAAGCTTTTATTTTGGAATGTTACA
TGAATTAGAGTGTAAATGAAATGACCCATCAGCAGGCTGATGCCATGATCATTGTTCTTT
TCCGCCTGAACCAGGCCTTTTCAATTCAGATGTTTGAGTTTCACAAAAGGAAGA