Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0271g00080.t01
CDS Infomation

cds chromosome:12X:Un:20123716:20129370:-1 gene:VIT_00s0271g00080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCGTTTCTCTCGCGCCGACTCTACCGCGCCTTCTCCACTTCCACAGCTGCAACAGCC
CAGGCCACCGGCAACCTTGAATCCGTATTCAAGGACATCTACCGTGAACGCAACCTCAAA
AGACTAGTCCAGAAGTTTAAGAAGTCCTCCGAGCTAGACCGGTTTCGAACCAAAACCGGC
ATCTACGAAGAGACGGTTCGCCGACTTGCCTCGGCCAAGCGCTTCAGATGGATCGAAGAA
ATCCTCGAAGAGCAGAAGAAGTACAAAGACATTTCCAGAGAAGGCTTTGCGGTTCGGCTT
ATCTCTCTTTATGGGAAATCAGGTATGTTCGACCATGCGTTCAAGGTGTTCGATGAAATG
CCGGACCAGAAATGCGAGCGCTCCGTGTTGTCGTTCAATGCCCTTCTTGGGGCGTGCGTT
CATTCTAAGAAGTTCGATAAGGTTGAGGGGTTTTTTAGTGAATTGCCGTCAAAGTTGTCG
GTTGAACCAGACTTAGTTTCATACAATATTGTGATTAAGGGGTTATGTGATATGGGCTCC
ATGGACTCCGCTGTTGGTATGCTAGATGAAATGGAGAAGAAGAGTTTGGAGCCGGATTTG
ATAACGTTTAATACCCTTTTAAATGGGTGTTATACGAGCGGTCGTTTTCTAGATGGAGAG
AAGATCTGGGGTCGAATGGAAAAGAAGAACATTCTCCCTGATATTAGGAGTTACAATGCA
AAGTTGGTTGGATTGGTATCATCAGAGAAGAGAATGTTGGAAGGGATTGGCCTAGTTGAA
GAAATGCAGACTAAGGGTATTAAGCCTGATGGGTATAGTTTCAATGCTTTGATCAAAGGC
TTTTGTAATGATGGGAAGGTGGACGAGGCTACGAATTGGTATGGAAAAATGAGAGAAAAT
GATTGTTCACCTGATAAATTAACTTTTGCAACACTTGTTCCCCTTTACTGTGAGAAGGGC
TCTTTTGATCAGGCTTTTGAGCTGTGTAAGGAGATCTTCAACAGGAAGTGCCTAGTTGAT
GAGGTGTTATTGCAGAATGCAGTTGATGGATTGGTTAAGGGAGGGTTAGGGTTTGATGTT
TCAAAGAATTGA

Peptide Sequence

PEP ID

VIT_00s0271g00080.t01
PEP Infomation

pep chromosome:12X:Un:20123716:20129370:-1 gene:VIT_00s0271g00080 transcript:VIT_00s0271g00080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSFLSRRLYRAFSTSTAATAQATGNLESVFKDIYRERNLKRLVQKFKKSSELDRFRTKTG
IYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGMFDHAFKVFDEM
PDQKCERSVLSFNALLGACVHSKKFDKVEGFFSELPSKLSVEPDLVSYNIVIKGLCDMGS
MDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNILPDIRSYNA
KLVGLVSSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYGKMREN
DCSPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGLGFDV
SKN

Transcript Sequence

Transcript ID

VIT_00s0271g00080.t01
Transcript Infomation

cdna chromosome:12X:Un:20123716:20129370:-1 gene:VIT_00s0271g00080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAAGCCTAAAACCCTTCTTCCCAAGAAGAAACAGCGAGGCCGAATCACAAACGCTGTCC
AGACTAAACGATGTCGTTTCTCTCGCGCCGACTCTACCGCGCCTTCTCCACTTCCACAGC
TGCAACAGCCCAGGCCACCGGCAACCTTGAATCCGTATTCAAGGACATCTACCGTGAACG
CAACCTCAAAAGACTAGTCCAGAAGTTTAAGAAGTCCTCCGAGCTAGACCGGTTTCGAAC
CAAAACCGGCATCTACGAAGAGACGGTTCGCCGACTTGCCTCGGCCAAGCGCTTCAGATG
GATCGAAGAAATCCTCGAAGAGCAGAAGAAGTACAAAGACATTTCCAGAGAAGGCTTTGC
GGTTCGGCTTATCTCTCTTTATGGGAAATCAGGTATGTTCGACCATGCGTTCAAGGTGTT
CGATGAAATGCCGGACCAGAAATGCGAGCGCTCCGTGTTGTCGTTCAATGCCCTTCTTGG
GGCGTGCGTTCATTCTAAGAAGTTCGATAAGGTTGAGGGGTTTTTTAGTGAATTGCCGTC
AAAGTTGTCGGTTGAACCAGACTTAGTTTCATACAATATTGTGATTAAGGGGTTATGTGA
TATGGGCTCCATGGACTCCGCTGTTGGTATGCTAGATGAAATGGAGAAGAAGAGTTTGGA
GCCGGATTTGATAACGTTTAATACCCTTTTAAATGGGTGTTATACGAGCGGTCGTTTTCT
AGATGGAGAGAAGATCTGGGGTCGAATGGAAAAGAAGAACATTCTCCCTGATATTAGGAG
TTACAATGCAAAGTTGGTTGGATTGGTATCATCAGAGAAGAGAATGTTGGAAGGGATTGG
CCTAGTTGAAGAAATGCAGACTAAGGGTATTAAGCCTGATGGGTATAGTTTCAATGCTTT
GATCAAAGGCTTTTGTAATGATGGGAAGGTGGACGAGGCTACGAATTGGTATGGAAAAAT
GAGAGAAAATGATTGTTCACCTGATAAATTAACTTTTGCAACACTTGTTCCCCTTTACTG
TGAGAAGGGCTCTTTTGATCAGGCTTTTGAGCTGTGTAAGGAGATCTTCAACAGGAAGTG
CCTAGTTGATGAGGTGTTATTGCAGAATGCAGTTGATGGATTGGTTAAGGGAGGGTTAGG
GTTTGATGTTTCAAAGAATTGA