Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0271g00060.t01
CDS Infomation

cds chromosome:12X:Un:20118944:20121282:1 gene:VIT_00s0271g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGATTCTCTCCTGCCTTTTACGCTTGCTCCATTCCTCCAGTTGGTCCTAACAAATTC
ACAGAGCTAGGCCAGTCCAAATTCAACAATGTTGTGCTTGTGCCTACTGCTCAGAAATGG
AGCATTGCCCACGACCACACCTTGGTTTATAAGCCCTTAAGAAAGCATAATCATCAATCT
CAACATCTCAGCTTTACTGATGAATTTTACGTCAAGCATGCACAAAGATTGGATGAAATT
AGAAACGTATTCAGTGAAGTTGGAGAGGATACGCTGGAAGGTTTGATGATGATTGATGCC
ATACAAAGGTTGGGCATTGACTACCACTTCAAAGAGGAAATTGAAGCAGTTCTACAGAGA
CAGTATACGAAAGCCAGCACTCACGGTGAGAGCATTCAGGATCTCTACGAGGTTGCTCTT
CGTTTTCGGCTATTGAGACAAGAAGGTTACCATGTGCCTGCAGATGTGTTTAACAACTTC
AAGAACAAGGAGGGGAAGTTTAAACAAAATCTCAGCAAAGACATCAAGGGATTGTTGGGT
TTATATGAAGCTTCACAACTGAGTATAGAAGGAGAAGATATCCTCGAGGAAGCCCAAAGA
TTCAGCAGCACACTCCTTAACGCAGGGTTGGAACATCTTGATCACCACGAAGCTACAGTT
GTTGGGCATACACTGGAGCATCCCCATCATAAGAGCTTGCCAAGGTTCATGGCCAAAAGC
TTCCTTAAGGACTTCCAGGGGCCAAATGGATGGCTGACTGTCTTGCAAGAACTTGCAAAA
GCGGATTTCAATATGGTTCAATCCATACATCAGCAGGAATTACTTCAAATTTCGAAATGG
TGGCAAGACCTAGGTTTGGCTGAGGAGTTGAAATTTGCAAGAGACCAACCACTGAAATGG
CACATGTGGCCCATGGCAGTACTCCCCGATCCAAGCTTGTCAGAGCAAAGGGTTGAGCTC
ACAAAACCCATCTCTATGATCTATATAATCGATGACATTTTTGATGTTCATGGAACGCTT
GATGAGCTCACTCTCTTTACAGAAGCTGTCAATAGATGGGATATAGCTGCTTTCGAGACG
CTACCAAACTACATGAAGATATGCTTCAAGACTCTAGATGAAATCACAAATGAAATCAGC
AACAAGGTCTACAAAGAGCACGGGTGGAACCCAGTAGACTCGCTACGGAAGACGTGGATG
AGTTTATGCAATGCGTTTCTAGTAGAAGCCAAATGGTTTGCCTCTGGGCATGTGCCAAAG
GCCCACGAGTACTTGAAAAACGGGGTCATCAGTTCAGGGGTACATGTGGTGCTTGTTCAC
TTGTTCTTTCTCTTGGGCCATGGCATAACCAGGGGAAATGTGGATCTTGTGGATGACTTC
CCCAGCATCATATCTTCCACAGCTGCCATTCTTCGTCTTTGGGACGACCTGGGAAGCGCC
AAGGATGAGAATCAAGACGGCCACGACGGGTCATACATCGAGTGCTACATTAAGGAACAC
CAAGGCTCTTCCATGGAAAATGCACGGCAAAATGTGACCTATATGATTTCAGACTTACGG
AAGCGCCTCAACAAGGAGTGCCTCTCTCAGCATCCATTTTCAACTTCTTTTACAAAGGGT
TCCCTTAACATTGCAAGGATGGTTCCTTTGATGTACAGTTATGATGACAATCAGAGTCTT
CCACACCTTGAGGAACATATGAAGTCCCTCCTCTTTGAAGCATATCCCCTGTAG

Peptide Sequence

PEP ID

VIT_00s0271g00060.t01
PEP Infomation

pep chromosome:12X:Un:20118944:20121282:1 gene:VIT_00s0271g00060 transcript:VIT_00s0271g00060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGFSPAFYACSIPPVGPNKFTELGQSKFNNVVLVPTAQKWSIAHDHTLVYKPLRKHNHQS
QHLSFTDEFYVKHAQRLDEIRNVFSEVGEDTLEGLMMIDAIQRLGIDYHFKEEIEAVLQR
QYTKASTHGESIQDLYEVALRFRLLRQEGYHVPADVFNNFKNKEGKFKQNLSKDIKGLLG
LYEASQLSIEGEDILEEAQRFSSTLLNAGLEHLDHHEATVVGHTLEHPHHKSLPRFMAKS
FLKDFQGPNGWLTVLQELAKADFNMVQSIHQQELLQISKWWQDLGLAEELKFARDQPLKW
HMWPMAVLPDPSLSEQRVELTKPISMIYIIDDIFDVHGTLDELTLFTEAVNRWDIAAFET
LPNYMKICFKTLDEITNEISNKVYKEHGWNPVDSLRKTWMSLCNAFLVEAKWFASGHVPK
AHEYLKNGVISSGVHVVLVHLFFLLGHGITRGNVDLVDDFPSIISSTAAILRLWDDLGSA
KDENQDGHDGSYIECYIKEHQGSSMENARQNVTYMISDLRKRLNKECLSQHPFSTSFTKG
SLNIARMVPLMYSYDDNQSLPHLEEHMKSLLFEAYPL

Transcript Sequence

Transcript ID

VIT_00s0271g00060.t01
Transcript Infomation

cdna chromosome:12X:Un:20118944:20121282:1 gene:VIT_00s0271g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTCGTTCTATCCCTCTGAATTAAAGTTACTCTTCCTTCTCGCTCTCCCAATGGGATTCT
CTCCTGCCTTTTACGCTTGCTCCATTCCTCCAGTTGGTCCTAACAAATTCACAGAGCTAG
GCCAGTCCAAATTCAACAATGTTGTGCTTGTGCCTACTGCTCAGAAATGGAGCATTGCCC
ACGACCACACCTTGGTTTATAAGCCCTTAAGAAAGCATAATCATCAATCTCAACATCTCA
GCTTTACTGATGAATTTTACGTCAAGCATGCACAAAGATTGGATGAAATTAGAAACGTAT
TCAGTGAAGTTGGAGAGGATACGCTGGAAGGTTTGATGATGATTGATGCCATACAAAGGT
TGGGCATTGACTACCACTTCAAAGAGGAAATTGAAGCAGTTCTACAGAGACAGTATACGA
AAGCCAGCACTCACGGTGAGAGCATTCAGGATCTCTACGAGGTTGCTCTTCGTTTTCGGC
TATTGAGACAAGAAGGTTACCATGTGCCTGCAGATGTGTTTAACAACTTCAAGAACAAGG
AGGGGAAGTTTAAACAAAATCTCAGCAAAGACATCAAGGGATTGTTGGGTTTATATGAAG
CTTCACAACTGAGTATAGAAGGAGAAGATATCCTCGAGGAAGCCCAAAGATTCAGCAGCA
CACTCCTTAACGCAGGGTTGGAACATCTTGATCACCACGAAGCTACAGTTGTTGGGCATA
CACTGGAGCATCCCCATCATAAGAGCTTGCCAAGGTTCATGGCCAAAAGCTTCCTTAAGG
ACTTCCAGGGGCCAAATGGATGGCTGACTGTCTTGCAAGAACTTGCAAAAGCGGATTTCA
ATATGGTTCAATCCATACATCAGCAGGAATTACTTCAAATTTCGAAATGGTGGCAAGACC
TAGGTTTGGCTGAGGAGTTGAAATTTGCAAGAGACCAACCACTGAAATGGCACATGTGGC
CCATGGCAGTACTCCCCGATCCAAGCTTGTCAGAGCAAAGGGTTGAGCTCACAAAACCCA
TCTCTATGATCTATATAATCGATGACATTTTTGATGTTCATGGAACGCTTGATGAGCTCA
CTCTCTTTACAGAAGCTGTCAATAGATGGGATATAGCTGCTTTCGAGACGCTACCAAACT
ACATGAAGATATGCTTCAAGACTCTAGATGAAATCACAAATGAAATCAGCAACAAGGTCT
ACAAAGAGCACGGGTGGAACCCAGTAGACTCGCTACGGAAGACGTGGATGAGTTTATGCA
ATGCGTTTCTAGTAGAAGCCAAATGGTTTGCCTCTGGGCATGTGCCAAAGGCCCACGAGT
ACTTGAAAAACGGGGTCATCAGTTCAGGGGTACATGTGGTGCTTGTTCACTTGTTCTTTC
TCTTGGGCCATGGCATAACCAGGGGAAATGTGGATCTTGTGGATGACTTCCCCAGCATCA
TATCTTCCACAGCTGCCATTCTTCGTCTTTGGGACGACCTGGGAAGCGCCAAGGATGAGA
ATCAAGACGGCCACGACGGGTCATACATCGAGTGCTACATTAAGGAACACCAAGGCTCTT
CCATGGAAAATGCACGGCAAAATGTGACCTATATGATTTCAGACTTACGGAAGCGCCTCA
ACAAGGAGTGCCTCTCTCAGCATCCATTTTCAACTTCTTTTACAAAGGGTTCCCTTAACA
TTGCAAGGATGGTTCCTTTGATGTACAGTTATGATGACAATCAGAGTCTTCCACACCTTG
AGGAACATATGAAGTCCCTCCTCTTTGAAGCATATCCCCTGTAGG