Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0258g00100.t01
CDS Infomation

cds chromosome:12X:Un:18315283:18318622:1 gene:VIT_00s0258g00100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGAGGGGGCCGAGATGAGTGCATGACATCGAATGGTTGTGGCGACCAGGGTCCACTC
ATCCGGTTCCCTTTCCGTCTAAAACACCAGCCACACCACTGTGGATATCCGGGATTTGAG
TTATCTTGCACTGAGAATAATCAGACCATGCTAGACCTGCCAGTTTCGGTAAAGCTCTTG
GTGAAGAAAATAGTTTACAAATCCCGGGAAATCATTGTCCAGGACCCGGATAATTGCCTT
GCGAGACAGCTTCGAAACCTCAATTTAGCTGCCTCCCCCTTCTACTTCAAATTTGGACTG
GACTTCACCTTCTTCATTAATTGTTCCTCATATAAAACTCCAGAACCCGGATCGTGGGCT
TATGATTTTGAGCCCATCCCTTGCCTTTCTAACCCTGGTAACCCAGTTTATGCTGTTTAT
TCCTCCGGATCTGTCCAATATACGGATCTATCCTCTTGCCGCAGGCTTTACAACGCTTCA
GCTCCAGGTAATCGAGATTATGGGGATTATATGTTCAATGGAAGTGCATTTTCTTTGAAG
TGGTCGAAATCAATATGTGGAAGCTGCCCAGAAGGAGGAAAAATATGCAGACTGAAGAAG
AGTAATAGCAGGGAACCAGAAACTGAATGTATTAAAGGTGCAATCTTTGGTTTCTTTCTT
CTCATGTTAGTAATTGTTGTGGCTTATCGAGTCTATAGCTCAAATAAAGTAGAAAGAGAT
AATAGAGTAAAGGTTAAAAAGTTTCTAGAAGACTATGAAGCTCTCAAGCCCTCAAGATAC
TCCTATGCTGATATTAAAAGGATTACGAGTCAATTCAAAGATAAATTAGGGGAAGGAGGA
TATGGAACAGTGTACAAAGGAAAGCTTTCAGATGAAGTTTTTGTTGCAGTAAAAATCCTT
AACAATTCTCAAGGAAATGGGGAAGAGTTCATTAATGAAGTAGCAACAATGGGTACAATC
CACCATGTTAATATAGTTCGTTTAGTTGGATTTTGTGCTGATAGATTTAAACGAGCTCTA
ATTTATGAGTACTTACCAAATGAGTCATTGGAAAAGTTCATATTTTCAAAAGTTGTCAAG
AACTATTCACTTAGTTGGAAGAAACTTCAAGAAATTGCTATAGGTATAGCAAAAGGAATT
GAGTATCTTCATCAAGGTTGTGACCAAAGAATCCTTCATTTTGATATCAAACCTCATAAT
ATTTTACTTGACCACAACTTTAATCCAAAGATTTCTGACTTTGGTTTAGCCAAATTGTGC
TCCAAGGAACAAAGTGCAGTCTCTATGACAATTGTAAGGGGAACAATGGGCTATATCGCT
CCAGAAGTGTTATCTAGGAATTTTGGGAATGTGTCTTATAAGTCAGATGTTTATAGTTTT
GGAATGTTGTTACTTGAAATGGTTGGAGGAAGGAAGAACATTGATGTTAGTGTAGAGAGT
ACTAGCCAAGTATATTTCCCAGAATGGATTTATAATCATTTGGATATAGGGGAAGAATTG
CATATTCGAATTAAAGAAGAAGGAGATGTTGAGATTGCAAAGAAATTAGCAATTGTGGGA
CTTTCATGTATTCAGTGGTGTCCAGTGGATCGTCCTTCCATGAAAATTGTGGTTCAAATG
TTGGAAGGAGAAGGAGACAAGTTAACCATGCCTCCTAACCCTTTTGCTTCAACGGTTCCA
ACAAACTTGAGCAAGCCAGGTAGAGCTTTTCAACAAGAGTTGGCAATAATTTCAGAACTA
GATTAA

Peptide Sequence

PEP ID

VIT_00s0258g00100.t01
PEP Infomation

pep chromosome:12X:Un:18315283:18318622:1 gene:VIT_00s0258g00100 transcript:VIT_00s0258g00100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRGGRDECMTSNGCGDQGPLIRFPFRLKHQPHHCGYPGFELSCTENNQTMLDLPVSVKLL
VKKIVYKSREIIVQDPDNCLARQLRNLNLAASPFYFKFGLDFTFFINCSSYKTPEPGSWA
YDFEPIPCLSNPGNPVYAVYSSGSVQYTDLSSCRRLYNASAPGNRDYGDYMFNGSAFSLK
WSKSICGSCPEGGKICRLKKSNSREPETECIKGAIFGFFLLMLVIVVAYRVYSSNKVERD
NRVKVKKFLEDYEALKPSRYSYADIKRITSQFKDKLGEGGYGTVYKGKLSDEVFVAVKIL
NNSQGNGEEFINEVATMGTIHHVNIVRLVGFCADRFKRALIYEYLPNESLEKFIFSKVVK
NYSLSWKKLQEIAIGIAKGIEYLHQGCDQRILHFDIKPHNILLDHNFNPKISDFGLAKLC
SKEQSAVSMTIVRGTMGYIAPEVLSRNFGNVSYKSDVYSFGMLLLEMVGGRKNIDVSVES
TSQVYFPEWIYNHLDIGEELHIRIKEEGDVEIAKKLAIVGLSCIQWCPVDRPSMKIVVQM
LEGEGDKLTMPPNPFASTVPTNLSKPGRAFQQELAIISELD

Transcript Sequence

Transcript ID

VIT_00s0258g00100.t01
Transcript Infomation

cdna chromosome:12X:Un:18315283:18318622:1 gene:VIT_00s0258g00100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTGTTTCTGACCTTGTTTGTGGAGATGAGAGGGGGCCGAGATGAGTGCATGACATCGAA
TGGTTGTGGCGACCAGGGTCCACTCATCCGGTTCCCTTTCCGTCTAAAACACCAGCCACA
CCACTGTGGATATCCGGGATTTGAGTTATCTTGCACTGAGAATAATCAGACCATGCTAGA
CCTGCCAGTTTCGGTAAAGCTCTTGGTGAAGAAAATAGTTTACAAATCCCGGGAAATCAT
TGTCCAGGACCCGGATAATTGCCTTGCGAGACAGCTTCGAAACCTCAATTTAGCTGCCTC
CCCCTTCTACTTCAAATTTGGACTGGACTTCACCTTCTTCATTAATTGTTCCTCATATAA
AACTCCAGAACCCGGATCGTGGGCTTATGATTTTGAGCCCATCCCTTGCCTTTCTAACCC
TGGTAACCCAGTTTATGCTGTTTATTCCTCCGGATCTGTCCAATATACGGATCTATCCTC
TTGCCGCAGGCTTTACAACGCTTCAGCTCCAGGTAATCGAGATTATGGGGATTATATGTT
CAATGGAAGTGCATTTTCTTTGAAGTGGTCGAAATCAATATGTGGAAGCTGCCCAGAAGG
AGGAAAAATATGCAGACTGAAGAAGAGTAATAGCAGGGAACCAGAAACTGAATGTATTAA
AGGTGCAATCTTTGGTTTCTTTCTTCTCATGTTAGTAATTGTTGTGGCTTATCGAGTCTA
TAGCTCAAATAAAGTAGAAAGAGATAATAGAGTAAAGGTTAAAAAGTTTCTAGAAGACTA
TGAAGCTCTCAAGCCCTCAAGATACTCCTATGCTGATATTAAAAGGATTACGAGTCAATT
CAAAGATAAATTAGGGGAAGGAGGATATGGAACAGTGTACAAAGGAAAGCTTTCAGATGA
AGTTTTTGTTGCAGTAAAAATCCTTAACAATTCTCAAGGAAATGGGGAAGAGTTCATTAA
TGAAGTAGCAACAATGGGTACAATCCACCATGTTAATATAGTTCGTTTAGTTGGATTTTG
TGCTGATAGATTTAAACGAGCTCTAATTTATGAGTACTTACCAAATGAGTCATTGGAAAA
GTTCATATTTTCAAAAGTTGTCAAGAACTATTCACTTAGTTGGAAGAAACTTCAAGAAAT
TGCTATAGGTATAGCAAAAGGAATTGAGTATCTTCATCAAGGTTGTGACCAAAGAATCCT
TCATTTTGATATCAAACCTCATAATATTTTACTTGACCACAACTTTAATCCAAAGATTTC
TGACTTTGGTTTAGCCAAATTGTGCTCCAAGGAACAAAGTGCAGTCTCTATGACAATTGT
AAGGGGAACAATGGGCTATATCGCTCCAGAAGTGTTATCTAGGAATTTTGGGAATGTGTC
TTATAAGTCAGATGTTTATAGTTTTGGAATGTTGTTACTTGAAATGGTTGGAGGAAGGAA
GAACATTGATGTTAGTGTAGAGAGTACTAGCCAAGTATATTTCCCAGAATGGATTTATAA
TCATTTGGATATAGGGGAAGAATTGCATATTCGAATTAAAGAAGAAGGAGATGTTGAGAT
TGCAAAGAAATTAGCAATTGTGGGACTTTCATGTATTCAGTGGTGTCCAGTGGATCGTCC
TTCCATGAAAATTGTGGTTCAAATGTTGGAAGGAGAAGGAGACAAGTTAACCATGCCTCC
TAACCCTTTTGCTTCAACGGTTCCAACAAACTTGAGCAAGCCAGGTAGAGCTTTTCAACA
AGAGTTGGCAATAATTTCAGAACTAGATTAAAAATAATTGTCTATATGTTCAACTTATTA
TGAATGTATAGTTCAATAAAAATTCATATTGTAGTTGTTCAACATCATAGCATCTTTATT
TATATTTCTGTTAATTGAACATATGATTGTATAAAATGATTATACTAGTGGCTCAATTGA
TGTTAGATTCCAGAAGTTCTTATTCCCATGTAATGTATTTCTTGTGTATTAAATTTTAAT
GAATATGTCCAAGAATATTCTCGCAA