Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0258g00050.t01
CDS Infomation

cds chromosome:12X:Un:18253267:18256851:1 gene:VIT_00s0258g00050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGAGGGGGCCGAGGTGAGTGCCCGACATCAAATCGTTGTGGCGACCAGGGTCCACTC
ATCCAGTTCCCTTTCCGTCTAAAAAGCCAGCCACACCACTGTGGATACCCGGGATTTGTT
TTATCTTGCACTGAGAATAATCAGATCATGCTGGAGCTGCCAGATTCGGTAAAGCTCTTG
GTGAAGAATATAATCTACAAATCCAGGGAAATCATTGTCCAGAACCCGGATAATTGCCTT
GAGAGACAGCTTCGAAACCTTAGTTTAGCTTCGTCCCCCTTCCAGTTCAAATTTGAGGGG
GACGTCACCTTCTTCAATTGTTCCTTACTTAAAACGGCAGAATCATTTGCTGCTCACTTC
ATCCCTTGCCTTTCTATCCCTGGTAACCCAGTTTATGCCGTTGACTCCTTCTATCCTCTC
CAAAATATGGACCTATCGTCTTGCCGCAGGCTTTACAACGCTTCAGTTGGATATCATGTC
TTTACGGATTATACATTCAATGGAAGTGCGTTTTCTTTGAAGTGGCCGAAATCAATATGT
GGAAGCTGCCTACGAGGAGGACACATATGCAGACTGAAAAAGAGTAATAGCAGGGAACCA
GAAACTGAATGTATTAAAGGTGTATCAAAGCAAGCAATGGTAACAGGCACAATCTTTGGT
TTCTTTCTACTTGTGTTAGTAATTGCTATGTTTTATCGTCTCTATAGCTCAGATAAATTA
GAAAGAGAGAATGGAATAAAGGTTAAAAGGTTTCTGGAAGACTATGAAGCTCTCAAGCCC
TCAAGATACTCCTATGTTGATATTAAAAGGATTACAAATCAATTCAAAGATAAATTAGGC
CAAGGAGGTTATGGAACAGTGTACAAGGGAAAGCTTTCACATGAAGTTTTTGTTGCAGTA
AAAATCCTTAATAATTCTCAAGGAAATGGAGAAGAGTTCATTAATGAAGTGGCAACGATG
GGTACAATCCACCATGTTAATATAGTTCGCTTAGTCGGATTTTGTGCTGATGGATTTAAA
CGAGCTCTAATTTATGAGTACTTACCAAATGAGTCATTAGAGAAGTTCATATTTTCAAGA
GATGTTAAGAACTATTCACTCAGTTGGAAGAAACTTCAAGAAATTGCTATAGGTATAGCG
AAAGGAATTGAGTATCTTCATCAAGGTTGTGATCAAAGAATCATCCATTTTGATATCAAA
TCTCATAATATTTTACTTGATCACAACTTTAATCCAAAGATTTCTGACTTTGGTTTAGCC
AAATTGTGCTCCAAGGAACAAAGTGCGGTCTCTATGACCGTTGCAAGGGGAACAATAGGC
TACATTGCTCCAGAAGTGTTGTCTAGGAATTTTGGGAATGTGTCTTATAAGTCAGATGTT
TATAGTTTTGGAATGTTGTTACTTGAAATGGTTGGAGGGAGGAAGAACATTGATGTTAGT
GTGGAGAGTACTAGCCAAGTATACTTCCCAGAATGGATTTATAATCATTTGGATATAGGG
GAAGAATTGTATATTCGGATTGAAGAAAAAGGAGATGTTGAGATTGCAAAGAAATTAGCA
ATTGTGGGACTCTCATGTATTCAATGGTTTCCAATGGATCGTCCTTCCATGAAAATTGTG
GTTCAAATGTTGGAAGGAAGAGGCAAGTTAACCATGCCTCCTAATCCTTTTGCTTCAACA
ACTCCAACAAAGACAAACTTGGGCAAACCAGGAAGTGTTTTTCAACAAGAGTTAGCAATC
ATTTCAGAAATAGAGTAA

Peptide Sequence

PEP ID

VIT_00s0258g00050.t01
PEP Infomation

pep chromosome:12X:Un:18253267:18256851:1 gene:VIT_00s0258g00050 transcript:VIT_00s0258g00050.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRGGRGECPTSNRCGDQGPLIQFPFRLKSQPHHCGYPGFVLSCTENNQIMLELPDSVKLL
VKNIIYKSREIIVQNPDNCLERQLRNLSLASSPFQFKFEGDVTFFNCSLLKTAESFAAHF
IPCLSIPGNPVYAVDSFYPLQNMDLSSCRRLYNASVGYHVFTDYTFNGSAFSLKWPKSIC
GSCLRGGHICRLKKSNSREPETECIKGVSKQAMVTGTIFGFFLLVLVIAMFYRLYSSDKL
ERENGIKVKRFLEDYEALKPSRYSYVDIKRITNQFKDKLGQGGYGTVYKGKLSHEVFVAV
KILNNSQGNGEEFINEVATMGTIHHVNIVRLVGFCADGFKRALIYEYLPNESLEKFIFSR
DVKNYSLSWKKLQEIAIGIAKGIEYLHQGCDQRIIHFDIKSHNILLDHNFNPKISDFGLA
KLCSKEQSAVSMTVARGTIGYIAPEVLSRNFGNVSYKSDVYSFGMLLLEMVGGRKNIDVS
VESTSQVYFPEWIYNHLDIGEELYIRIEEKGDVEIAKKLAIVGLSCIQWFPMDRPSMKIV
VQMLEGRGKLTMPPNPFASTTPTKTNLGKPGSVFQQELAIISEIE

Transcript Sequence

Transcript ID

VIT_00s0258g00050.t01
Transcript Infomation

cdna chromosome:12X:Un:18253267:18256851:1 gene:VIT_00s0258g00050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCTCAATATTTGTATCCCCCTTTCCACTTTCTTTCCTATCCCTGAGATTTCTGTTCTTG
GCAAAAGTCACAACTTCCTTCCATAAAAATGGATCGATCTCTCTCTTTATTTTTGTTCTC
GTTTCTGACCTTGTTTGTGGAGATGAGAGGGGGCCGAGGTGAGTGCCCGACATCAAATCG
TTGTGGCGACCAGGGTCCACTCATCCAGTTCCCTTTCCGTCTAAAAAGCCAGCCACACCA
CTGTGGATACCCGGGATTTGTTTTATCTTGCACTGAGAATAATCAGATCATGCTGGAGCT
GCCAGATTCGGTAAAGCTCTTGGTGAAGAATATAATCTACAAATCCAGGGAAATCATTGT
CCAGAACCCGGATAATTGCCTTGAGAGACAGCTTCGAAACCTTAGTTTAGCTTCGTCCCC
CTTCCAGTTCAAATTTGAGGGGGACGTCACCTTCTTCAATTGTTCCTTACTTAAAACGGC
AGAATCATTTGCTGCTCACTTCATCCCTTGCCTTTCTATCCCTGGTAACCCAGTTTATGC
CGTTGACTCCTTCTATCCTCTCCAAAATATGGACCTATCGTCTTGCCGCAGGCTTTACAA
CGCTTCAGTTGGATATCATGTCTTTACGGATTATACATTCAATGGAAGTGCGTTTTCTTT
GAAGTGGCCGAAATCAATATGTGGAAGCTGCCTACGAGGAGGACACATATGCAGACTGAA
AAAGAGTAATAGCAGGGAACCAGAAACTGAATGTATTAAAGGTGTATCAAAGCAAGCAAT
GGTAACAGGCACAATCTTTGGTTTCTTTCTACTTGTGTTAGTAATTGCTATGTTTTATCG
TCTCTATAGCTCAGATAAATTAGAAAGAGAGAATGGAATAAAGGTTAAAAGGTTTCTGGA
AGACTATGAAGCTCTCAAGCCCTCAAGATACTCCTATGTTGATATTAAAAGGATTACAAA
TCAATTCAAAGATAAATTAGGCCAAGGAGGTTATGGAACAGTGTACAAGGGAAAGCTTTC
ACATGAAGTTTTTGTTGCAGTAAAAATCCTTAATAATTCTCAAGGAAATGGAGAAGAGTT
CATTAATGAAGTGGCAACGATGGGTACAATCCACCATGTTAATATAGTTCGCTTAGTCGG
ATTTTGTGCTGATGGATTTAAACGAGCTCTAATTTATGAGTACTTACCAAATGAGTCATT
AGAGAAGTTCATATTTTCAAGAGATGTTAAGAACTATTCACTCAGTTGGAAGAAACTTCA
AGAAATTGCTATAGGTATAGCGAAAGGAATTGAGTATCTTCATCAAGGTTGTGATCAAAG
AATCATCCATTTTGATATCAAATCTCATAATATTTTACTTGATCACAACTTTAATCCAAA
GATTTCTGACTTTGGTTTAGCCAAATTGTGCTCCAAGGAACAAAGTGCGGTCTCTATGAC
CGTTGCAAGGGGAACAATAGGCTACATTGCTCCAGAAGTGTTGTCTAGGAATTTTGGGAA
TGTGTCTTATAAGTCAGATGTTTATAGTTTTGGAATGTTGTTACTTGAAATGGTTGGAGG
GAGGAAGAACATTGATGTTAGTGTGGAGAGTACTAGCCAAGTATACTTCCCAGAATGGAT
TTATAATCATTTGGATATAGGGGAAGAATTGTATATTCGGATTGAAGAAAAAGGAGATGT
TGAGATTGCAAAGAAATTAGCAATTGTGGGACTCTCATGTATTCAATGGTTTCCAATGGA
TCGTCCTTCCATGAAAATTGTGGTTCAAATGTTGGAAGGAAGAGGCAAGTTAACCATGCC
TCCTAATCCTTTTGCTTCAACAACTCCAACAAAGACAAACTTGGGCAAACCAGGAAGTGT
TTTTCAACAAGAGTTAGCAATCATTTCAGAAATAGAGTAAAATAATTGCATCAAATTATT
ATGAATGTGTAATTTTATAAAAATTCATATTGTAGTTGTTCATCATCGTAGCATTTCTAT
TTATATTTCTGTTAATTGAACAAATGATTGTACACAATGATTATACCAGTG