Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0253g00060.t01
CDS Infomation

cds chromosome:12X:Un:17750019:17752319:-1 gene:VIT_00s0253g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATTCAAGAGCTGTTAGGGGGAGGTGCTGGACTTATAGGAGGAGAGAGGAAAATCACC
ATTAATGGAGGAATTTTAGAGGCCTCTCCCTCTCCTTCTCCTTCACCTTCTCCATCTTCT
TCTTCTTCTGGCAATACTACTACTGTTACCACTGCTGCTGCTGCTACCACTTCTTCTGCT
TCTGAGAATTTGAGGTGTCCTCGCTGTGATTCTTCCAATACTAAGTTTTGTTATTACAAC
AACTATAACCTTACACAGCCTCGCCACTTCTGCAAGACCTGCCGGAGGTATTGGACTAAA
GGCGGTGCCCTCCGCAATGTTCCGATTGGAGGGGGTTGCCGGAAGAACAAGAACACTAGC
GTTTCAACAGCTGTGGGGAAATCGAGTGCCGGAAAGGCCAAGAGCGCGGTGTCCGAGATC
GGAAAATCGGGTCTGGGAGGTGGGTTTGATCACGAGATACCTTCCAACCCAATTCTTTGG
GCGTCGCCGCAGAATTCTCATCTGCTGGCCTTACTGAGAGCCACCCAGAACCCTAATCCT
AACCCTAGTCCAATATCGAATTCTGTAACTGTGAAGGATGATGGGGTTATGATTGGATCC
CACATGACCTCGGAGTCAGGAGTGGGAACAGGTGCAGTAAATATTGCTCGGAACATGGGG
TTGGATCATCTGAACCAGCTTCCTTCTATTGGTCTGTGCAGCTCTTACTGGAGAAACAAT
CAACATCAAACTCAACAGCACCAACAAAACAGCCACCATCAACAGCAAAATGGCTTTATA
CTTGGTGAAGTTCAAAACACTGGGATTCAGGAGCTGTATCAAAGGCTTAGATCATCCACT
AATTATTACACCGATCATTCACCAGTAGTTCTCAGCAATGCGGTTTCTTCCTCTTCATCC
ATTTTGGAGTCTGCTCCGATTGCGGGAGTTCTCAGCAATGCGGTTTCTTCCTCTTCATCC
ATTTTGGAGTCTGCTCCGATTGCGGGAGGTGAATTGGGTTACTGGAATCCGACCTTTTCG
TGGTCTGATCTTCCAACAACTAATGGTGCATATCCTTAA

Peptide Sequence

PEP ID

VIT_00s0253g00060.t01
PEP Infomation

pep chromosome:12X:Un:17750019:17752319:-1 gene:VIT_00s0253g00060 transcript:VIT_00s0253g00060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MIQELLGGGAGLIGGERKITINGGILEASPSPSPSPSPSSSSSGNTTTVTTAAAATTSSA
SENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTS
VSTAVGKSSAGKAKSAVSEIGKSGLGGGFDHEIPSNPILWASPQNSHLLALLRATQNPNP
NPSPISNSVTVKDDGVMIGSHMTSESGVGTGAVNIARNMGLDHLNQLPSIGLCSSYWRNN
QHQTQQHQQNSHHQQQNGFILGEVQNTGIQELYQRLRSSTNYYTDHSPVVLSNAVSSSSS
ILESAPIAGVLSNAVSSSSSILESAPIAGGELGYWNPTFSWSDLPTTNGAYP

Transcript Sequence

Transcript ID

VIT_00s0253g00060.t01
Transcript Infomation

cdna chromosome:12X:Un:17750019:17752319:-1 gene:VIT_00s0253g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCAATTCATGTTTCTACCTCTCTTTATCACTCTCACATAGATCTCACATATACTGTAAT
ACTAATACACAACAAAACCTACTTTCTTTATCTTTTCCACTGCTAAAAAGATCTCACCTC
ACTTTGCTTTTCTTGTTTTTGGATTGTTGTAGATCTTCAAAGGCAGCAAAAGAAAAAAAA
GGATGATTCAAGAGCTGTTAGGGGGAGGTGCTGGACTTATAGGAGGAGAGAGGAAAATCA
CCATTAATGGAGGAATTTTAGAGGCCTCTCCCTCTCCTTCTCCTTCACCTTCTCCATCTT
CTTCTTCTTCTGGCAATACTACTACTGTTACCACTGCTGCTGCTGCTACCACTTCTTCTG
CTTCTGAGAATTTGAGGTGTCCTCGCTGTGATTCTTCCAATACTAAGTTTTGTTATTACA
ACAACTATAACCTTACACAGCCTCGCCACTTCTGCAAGACCTGCCGGAGGTATTGGACTA
AAGGCGGTGCCCTCCGCAATGTTCCGATTGGAGGGGGTTGCCGGAAGAACAAGAACACTA
GCGTTTCAACAGCTGTGGGGAAATCGAGTGCCGGAAAGGCCAAGAGCGCGGTGTCCGAGA
TCGGAAAATCGGGTCTGGGAGGTGGGTTTGATCACGAGATACCTTCCAACCCAATTCTTT
GGGCGTCGCCGCAGAATTCTCATCTGCTGGCCTTACTGAGAGCCACCCAGAACCCTAATC
CTAACCCTAGTCCAATATCGAATTCTGTAACTGTGAAGGATGATGGGGTTATGATTGGAT
CCCACATGACCTCGGAGTCAGGAGTGGGAACAGGTGCAGTAAATATTGCTCGGAACATGG
GGTTGGATCATCTGAACCAGCTTCCTTCTATTGGTCTGTGCAGCTCTTACTGGAGAAACA
ATCAACATCAAACTCAACAGCACCAACAAAACAGCCACCATCAACAGCAAAATGGCTTTA
TACTTGGTGAAGTTCAAAACACTGGGATTCAGGAGCTGTATCAAAGGCTTAGATCATCCA
CTAATTATTACACCGATCATTCACCAGTAGTTCTCAGCAATGCGGTTTCTTCCTCTTCAT
CCATTTTGGAGTCTGCTCCGATTGCGGGAGTTCTCAGCAATGCGGTTTCTTCCTCTTCAT
CCATTTTGGAGTCTGCTCCGATTGCGGGAGGTGAATTGGGTTACTGGAATCCGACCTTTT
CGTGGTCTGATCTTCCAACAACTAATGGTGCATATCCTTAAAAGATCCTTTTCTTTTGAT
ATCATTT