Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0253g00040.t01
CDS Infomation

cds chromosome:12X:Un:17736901:17740780:1 gene:VIT_00s0253g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGAGAAAAGCGGTTTTGCTCCACCTGATCTGTGTTTTGTTGGGTGTTTTCTTGGTG
AATGGAGAGGACCCTTATAAATACTACACATGGACTGTCACCTATGGAACTATTTCTCCT
CTGGGCGTCCCCCAACAGGTCATCCTCATCAATGGTCAGTTTCCTGGTCCGGCACTTGAG
GTTGTGACTAATGACAACATAATCCTCGACCTGATTAATAAGCTTGACCAGCCTTTTCTC
TTGACTTGGAATGGAATTAAACAGAGGAAGAACTCATGGCAAGATGGAGTATTGGGGACC
AATTGTCCTATCCCCCCAAACTCAAACTACACCTACAAGTTCCAAACTAAGGATCAGATT
GGGACTTTCACATATTTCCCATCAACCCTTTTCCATAAAGCTGCCGGAGGGTTTGGAGCA
ATCAATGTCTATGAAAGACCTAGGATCCCAATCCCATTTCCAGACCCTGCTGGAGATTTC
ACTTTACTTGTTGGTGATTGGTACAAGACCAGCCATAAGACATTACAGCAAACTCTGGAC
TCAGGGAAACCTCTTCCCTTCCCTGATGGTGTCCTTATAAATGGCCAGACTAGTTCTTCC
TTCAGTGGTGATCAAGGTAAAACTTACATGTTCAGGATCTCAAACGTGGGCCTATCAACC
TCAATCAACTTTAGGATTCAGGGGCATACAATGAAGCTAGTTGAGGTGGAAGGATCTCAT
ACTCTTCAGAATACATATGATTCTCTTGACGTGCATGTGGGCCAATCCATTGCTGTTTTA
GTTACCTTAGATCAGCTCCCAAAAGACTACTACATTGTTGCATCCACAAGGTTTACAAAG
CAGATTCTCACTGCAACTGCAGTGTTACACTATACGAACTCTCACACCCCAGTTTCTGGG
CCTGTGCCTGCTGGTCCTACCTATCAAATACACTGGTCTATGAAGCAAGCCAGAACCTAC
AGGTGGAACTTGACAGCAAGTGCAGCCAGACCCAACCCTCAGGGCTCATTCCATTATGGA
AAGATAACACCATCAAGGACCATTATGTTGGTGAACTCAGCACCTCGACTAAATGGGAAG
CAGCGCTATGCTGTTAATGGGGTCTCCTACATTAACGCTGATACTCCTCTGAAGCTTGCT
GATTATTTCAATATCCCTGGGGTATTCAGTGTAAATTCTATTCAAGACCTTCCCTCAGGT
GGTTCCTCATTCCTGTCAACCTCTGTCATGGCAGCCAACCACCATGACTTCATTGAAGTT
GTTTTCCAAAACAATGAGAATACCATTCAGTCTTGGCATCTCGATGGTTATGATTTTTGG
GTAGTTGGTTATGGTTTTGGACAGTGGACACCAGCCAGAAGAAAAAGCTATAATCTAATT
GATGCTCTTACTCGACACACTGCTCAGGTATACCCCAGGTCTTGGACCACTATATGGGTC
TCCTTGGACAACCAAGGCATGTGGAACATGAGGTCTGCAGTATGGGAAAGGCAATATCTT
GGGCAGCAATTCTATCTCAGGGTCTTTAACCCAGTTCACAGCCCTGCTAATGAATATGAT
ATTCCTAAAAATGCTCTACTTTGTGGAAAAGCCATAGGAAGGCACCCTTAG

Peptide Sequence

PEP ID

VIT_00s0253g00040.t01
PEP Infomation

pep chromosome:12X:Un:17736901:17740780:1 gene:VIT_00s0253g00040 transcript:VIT_00s0253g00040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MMRKAVLLHLICVLLGVFLVNGEDPYKYYTWTVTYGTISPLGVPQQVILINGQFPGPALE
VVTNDNIILDLINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQI
GTFTYFPSTLFHKAAGGFGAINVYERPRIPIPFPDPAGDFTLLVGDWYKTSHKTLQQTLD
SGKPLPFPDGVLINGQTSSSFSGDQGKTYMFRISNVGLSTSINFRIQGHTMKLVEVEGSH
TLQNTYDSLDVHVGQSIAVLVTLDQLPKDYYIVASTRFTKQILTATAVLHYTNSHTPVSG
PVPAGPTYQIHWSMKQARTYRWNLTASAARPNPQGSFHYGKITPSRTIMLVNSAPRLNGK
QRYAVNGVSYINADTPLKLADYFNIPGVFSVNSIQDLPSGGSSFLSTSVMAANHHDFIEV
VFQNNENTIQSWHLDGYDFWVVGYGFGQWTPARRKSYNLIDALTRHTAQVYPRSWTTIWV
SLDNQGMWNMRSAVWERQYLGQQFYLRVFNPVHSPANEYDIPKNALLCGKAIGRHP

Transcript Sequence

Transcript ID

VIT_00s0253g00040.t01
Transcript Infomation

cdna chromosome:12X:Un:17736901:17740780:1 gene:VIT_00s0253g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGAGAAAAGCGGTTTTGCTCCACCTGATCTGTGTTTTGTTGGGTGTTTTCTTGGTG
AATGGAGAGGACCCTTATAAATACTACACATGGACTGTCACCTATGGAACTATTTCTCCT
CTGGGCGTCCCCCAACAGGTCATCCTCATCAATGGTCAGTTTCCTGGTCCGGCACTTGAG
GTTGTGACTAATGACAACATAATCCTCGACCTGATTAATAAGCTTGACCAGCCTTTTCTC
TTGACTTGGAATGGAATTAAACAGAGGAAGAACTCATGGCAAGATGGAGTATTGGGGACC
AATTGTCCTATCCCCCCAAACTCAAACTACACCTACAAGTTCCAAACTAAGGATCAGATT
GGGACTTTCACATATTTCCCATCAACCCTTTTCCATAAAGCTGCCGGAGGGTTTGGAGCA
ATCAATGTCTATGAAAGACCTAGGATCCCAATCCCATTTCCAGACCCTGCTGGAGATTTC
ACTTTACTTGTTGGTGATTGGTACAAGACCAGCCATAAGACATTACAGCAAACTCTGGAC
TCAGGGAAACCTCTTCCCTTCCCTGATGGTGTCCTTATAAATGGCCAGACTAGTTCTTCC
TTCAGTGGTGATCAAGGTAAAACTTACATGTTCAGGATCTCAAACGTGGGCCTATCAACC
TCAATCAACTTTAGGATTCAGGGGCATACAATGAAGCTAGTTGAGGTGGAAGGATCTCAT
ACTCTTCAGAATACATATGATTCTCTTGACGTGCATGTGGGCCAATCCATTGCTGTTTTA
GTTACCTTAGATCAGCTCCCAAAAGACTACTACATTGTTGCATCCACAAGGTTTACAAAG
CAGATTCTCACTGCAACTGCAGTGTTACACTATACGAACTCTCACACCCCAGTTTCTGGG
CCTGTGCCTGCTGGTCCTACCTATCAAATACACTGGTCTATGAAGCAAGCCAGAACCTAC
AGGTGGAACTTGACAGCAAGTGCAGCCAGACCCAACCCTCAGGGCTCATTCCATTATGGA
AAGATAACACCATCAAGGACCATTATGTTGGTGAACTCAGCACCTCGACTAAATGGGAAG
CAGCGCTATGCTGTTAATGGGGTCTCCTACATTAACGCTGATACTCCTCTGAAGCTTGCT
GATTATTTCAATATCCCTGGGGTATTCAGTGTAAATTCTATTCAAGACCTTCCCTCAGGT
GGTTCCTCATTCCTGTCAACCTCTGTCATGGCAGCCAACCACCATGACTTCATTGAAGTT
GTTTTCCAAAACAATGAGAATACCATTCAGTCTTGGCATCTCGATGGTTATGATTTTTGG
GTAGTTGGTTATGGTTTTGGACAGTGGACACCAGCCAGAAGAAAAAGCTATAATCTAATT
GATGCTCTTACTCGACACACTGCTCAGGTATACCCCAGGTCTTGGACCACTATATGGGTC
TCCTTGGACAACCAAGGCATGTGGAACATGAGGTCTGCAGTATGGGAAAGGCAATATCTT
GGGCAGCAATTCTATCTCAGGGTCTTTAACCCAGTTCACAGCCCTGCTAATGAATATGAT
ATTCCTAAAAATGCTCTACTTTGTGGAAAAGCCATAGGAAGGCACCCTTAGTATGACCAT
TCATTTATTTAGTATCTGGTTTTTCCAGTCATGATGGCTTGACTGTAATAGTAAATCAGA
AAGAGTGAAA