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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0252g00130.t01
CDS Infomation

cds chromosome:12X:Un:17696021:17697610:-1 gene:VIT_00s0252g00130 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-hand calcium-binding protein [Source:UniProtKB/TrEMBL;Acc:E2JF17]
Sequence

ATGTCTGGATATCCACACGCGCCTCCAGGTCACGGCTACGGCTACGGTGCGCCGCCGCCG
GCGCAGCCTTACTCTGCAACTCCATATGGTGCGCCGGCGCCACAAGGCTACCAACCGTAC
GCCCCCGTGGCCACACCCTATGGTGCTCCATCGGCGCCGTACGCAGCCCCAGGAGAGAAA
CCCCCTAAGGAGAACAAGCCCCACGGAGGCTCCAGCCACCAACCTCCGCCATCGTCCATG
GGAGGGTATCCGCCTTCGGCGCCGGGGTTCGGAAGTCCCTTCGCGTTGCTTGTGCCGTCG
GCTTTTCCTCCGGGGACGGACCCCAACGTGGTGGCATGCTTCCAGATGGCGGACCAGGAC
GGTAGTGGGTTCATCGACGATAAGGAGTTGCAGGGGGCTTTGTCTTCTTACAATCAGAGG
TTCAGCCTCCGAACTGTTCATCTTCTCATGTATCTCTTCACCAACAGTAACGCCCGAAAG
ATCGGCCCCAAGGAATTCACAGCTGTGTTTTACAGTCTTCAGAATTGGAGGGCGATATTT
GAGAATTTTGACAGGGACCGTAGTGGGAAAATCGAAGCTGGGGAGCTGAGAGAGGCACTG
ATGAGCCTAGGATTTGCTGTTTCGCCAGTGGTTTTGGATTTGCTGCTTTCCAAGTTTGAT
AAGAGTGGAGGCAGAAACAAGGCTATTGAATATGATAATTTTATTGAGTGCTGTCTCACG
GTAAAGGGGCTGACAGAGAAATTCAAGGAGAAGGATAGCTCGTTCTCTGGTTCCGCAACC
TTCAGTTATGAGAATTTTATGCTCACCGTCTTGCCATTTCTTATTGCTTAG

Peptide Sequence

PEP ID

VIT_00s0252g00130.t01
PEP Infomation

pep chromosome:12X:Un:17696021:17697610:-1 gene:VIT_00s0252g00130 transcript:VIT_00s0252g00130.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-hand calcium-binding protein [Source:UniProtKB/TrEMBL;Acc:E2JF17]
Sequence

MSGYPHAPPGHGYGYGAPPPAQPYSATPYGAPAPQGYQPYAPVATPYGAPSAPYAAPGEK
PPKENKPHGGSSHQPPPSSMGGYPPSAPGFGSPFALLVPSAFPPGTDPNVVACFQMADQD
GSGFIDDKELQGALSSYNQRFSLRTVHLLMYLFTNSNARKIGPKEFTAVFYSLQNWRAIF
ENFDRDRSGKIEAGELREALMSLGFAVSPVVLDLLLSKFDKSGGRNKAIEYDNFIECCLT
VKGLTEKFKEKDSSFSGSATFSYENFMLTVLPFLIA

Transcript Sequence

Transcript ID

VIT_00s0252g00130.t01
Transcript Infomation

cdna chromosome:12X:Un:17696021:17697610:-1 gene:VIT_00s0252g00130 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-hand calcium-binding protein [Source:UniProtKB/TrEMBL;Acc:E2JF17]
Sequence

CTCGATTCGTCTTTTAGGAAAATGTCTGGATATCCACACGCGCCTCCAGGTCACGGCTAC
GGCTACGGTGCGCCGCCGCCGGCGCAGCCTTACTCTGCAACTCCATATGGTGCGCCGGCG
CCACAAGGCTACCAACCGTACGCCCCCGTGGCCACACCCTATGGTGCTCCATCGGCGCCG
TACGCAGCCCCAGGAGAGAAACCCCCTAAGGAGAACAAGCCCCACGGAGGCTCCAGCCAC
CAACCTCCGCCATCGTCCATGGGAGGGTATCCGCCTTCGGCGCCGGGGTTCGGAAGTCCC
TTCGCGTTGCTTGTGCCGTCGGCTTTTCCTCCGGGGACGGACCCCAACGTGGTGGCATGC
TTCCAGATGGCGGACCAGGACGGTAGTGGGTTCATCGACGATAAGGAGTTGCAGGGGGCT
TTGTCTTCTTACAATCAGAGGTTCAGCCTCCGAACTGTTCATCTTCTCATGTATCTCTTC
ACCAACAGTAACGCCCGAAAGATCGGCCCCAAGGAATTCACAGCTGTGTTTTACAGTCTT
CAGAATTGGAGGGCGATATTTGAGAATTTTGACAGGGACCGTAGTGGGAAAATCGAAGCT
GGGGAGCTGAGAGAGGCACTGATGAGCCTAGGATTTGCTGTTTCGCCAGTGGTTTTGGAT
TTGCTGCTTTCCAAGTTTGATAAGAGTGGAGGCAGAAACAAGGCTATTGAATATGATAAT
TTTATTGAGTGCTGTCTCACGGTAAAGGGGCTGACAGAGAAATTCAAGGAGAAGGATAGC
TCGTTCTCTGGTTCCGCAACCTTCAGTTATGAGAATTTTATGCTCACCGTCTTGCCATTT
CTTATTGCTTAGTAACATCACATGTAAACTATGGTCTATGGTTTTTAGTTTTTAGACTGC
TGGAATGTTGTTTTTCTGTAATTTCCTGCTTTCCTTTTTTTATCTGTATGACCCGTGTTA
GTCACCATAATAAAAGCTTTTAGCCTTCTAC