Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0252g00040.t01
CDS Infomation

cds chromosome:12X:Un:17633273:17635724:1 gene:VIT_00s0252g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGCTCATTCTCTTATAGCTTCTTTAGATTGAAGAACACTATATTCTTCAGAATTTTC
ATGATTTTGTTCTTGAGCAGTATCACTCATCGAATGAACCTTTGCTCCAACCTTCCTCTA
GCAGACCCAAGTTTGCCCAACTTGGGTTCATCCTATGTTCTTTCTTCATTGAAAACAATC
CATCTAGACGGCCACTTCAACTTCGACAATATTTATCATGCAGCCAATGATTTTGGCAAC
AGACACCATTACCTTCCATCGGCAATTCTACATCCAAAATCAGTTTCTGATATTTCCTCC
ACAATAAAGCATATATTTGAAATGGGTCCAGCAACAGAACTAACCATTGCCGCTAGAGGC
CATGGTCACTCTGTCCAAGGTCAAGCACAGGCCCATCGAGGTGTAGTCGTCAACATGGAA
TCACTTCAGGCACCCAAAACGATAGTTCACACCGGGAAGATGCCTTATGCAGATGTTTCT
GGCGGGGAGCTGTGGATAAATATTCTGCATGAGTCTCTTAAACACGGCCTTGCACCCAAA
TCCTGGACAGATTATCTTCATCTGACAGTCGGGGGCACTCTGTCAAATGCAGGAATTAGT
GGGCAAGCATTCCGGCATGGACCACAGATCAATAACGTCTACCAGCTGGAAGTTGTCACA
GGGAAAGGAGACATAATTACCTGTTCAGAGACGCAGAATGCAGACCTATTTTATGGAGTT
CTTGGAGGATTGGGACAGTTCGGCATCATCACCCGTGCTAGAATTTCTCTTGAACCAGCA
CCCAAGATGGTGAAATGGATTAGAGTGCTCTATTCAGAATTCTCCATTTTTTCCAAGGAC
CAAGAACACTTGATATCTTTCAAGAATTCGTTTGACTATATTGAAGGATTTGTTATAATA
AACAGAACTGGCCTGCTTAATACCTGGAGATCTTCCTTCAATCCTGGAGAACCACTTCAA
GCAAGCCAGTTCAATTCAGATGGAAGAACTCTCTACTGCCTGGAAATGGCCAAATACTTT
AACCCAGATGAGACCCATATTGTGAACCAGGTAATCGAGAGCTTGCTGTCTGAATTGAGT
TATATTCCATCCACACTTTTCCTATCGGAAGTTCCATATGTGGACTTCTTGGATAGAGTA
CATGTCTCTGAGATAAAACTCCGTGCGAAAGGATTATGGGAAGTGCCTCACCCATGGTTG
AATCTTCTCATTCCCAAAAGCAGAATTCACGATTTTGCCAAAGAAGTCTTTGGGAACATT
CTCAGAGACACTGGCAATGGTCCTATACTCATCTACCCAGTTAACAAATCCAAGTGGAAC
AATAGAACATCTTTGGTTACTCCACAAGAAGATATTTTCTACCTAGTGGCATTCCTATCC
TCTGCAGTACCATCTTCCACAGGAACAGATGGCTTAGAGCATATTTTAACACAAAACGAA
AGGATACTTGATTTCTGTGAAGGGGCCCGTCTGGGGATGAAGCAATATCTGCCCCATTAC
AGCACTCAGGATAAGTGGCAAGCCCACTTTGGCCCTAAATGGGAAGTTTTCGTAAAGAGG
AAATCAACGTATGACCCCTTAGCAATCCTTGCTCCAGGGCAGAGAATCTTCCAAAAAGCA
ACATCCTTCTCATGGAGCAGGATTCTCGCATAA

Peptide Sequence

PEP ID

VIT_00s0252g00040.t01
PEP Infomation

pep chromosome:12X:Un:17633273:17635724:1 gene:VIT_00s0252g00040 transcript:VIT_00s0252g00040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSFSYSFFRLKNTIFFRIFMILFLSSITHRMNLCSNLPLADPSLPNLGSSYVLSSLKTI
HLDGHFNFDNIYHAANDFGNRHHYLPSAILHPKSVSDISSTIKHIFEMGPATELTIAARG
HGHSVQGQAQAHRGVVVNMESLQAPKTIVHTGKMPYADVSGGELWINILHESLKHGLAPK
SWTDYLHLTVGGTLSNAGISGQAFRHGPQINNVYQLEVVTGKGDIITCSETQNADLFYGV
LGGLGQFGIITRARISLEPAPKMVKWIRVLYSEFSIFSKDQEHLISFKNSFDYIEGFVII
NRTGLLNTWRSSFNPGEPLQASQFNSDGRTLYCLEMAKYFNPDETHIVNQVIESLLSELS
YIPSTLFLSEVPYVDFLDRVHVSEIKLRAKGLWEVPHPWLNLLIPKSRIHDFAKEVFGNI
LRDTGNGPILIYPVNKSKWNNRTSLVTPQEDIFYLVAFLSSAVPSSTGTDGLEHILTQNE
RILDFCEGARLGMKQYLPHYSTQDKWQAHFGPKWEVFVKRKSTYDPLAILAPGQRIFQKA
TSFSWSRILA

Transcript Sequence

Transcript ID

VIT_00s0252g00040.t01
Transcript Infomation

cdna chromosome:12X:Un:17633273:17635724:1 gene:VIT_00s0252g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGGCTATGCCACCCAAAACCTTTCCTTTAAATCCTCCTCTCTACCCTTCATCTCCTTGGC
CTCTTCTACACCTTTTCTTTTGCTTAGCTTCACAAAACAAAAAGAGAAGCTGCTCAAGCA
CTCCCTTTCACTCTCTCTCGCTCTCTCTCTCTCTCTCTCTCTCTCCCCCCAACTCAAAAA
AATTATGGGCTCATTCTCTTATAGCTTCTTTAGATTGAAGAACACTATATTCTTCAGAAT
TTTCATGATTTTGTTCTTGAGCAGTATCACTCATCGAATGAACCTTTGCTCCAACCTTCC
TCTAGCAGACCCAAGTTTGCCCAACTTGGGTTCATCCTATGTTCTTTCTTCATTGAAAAC
AATCCATCTAGACGGCCACTTCAACTTCGACAATATTTATCATGCAGCCAATGATTTTGG
CAACAGACACCATTACCTTCCATCGGCAATTCTACATCCAAAATCAGTTTCTGATATTTC
CTCCACAATAAAGCATATATTTGAAATGGGTCCAGCAACAGAACTAACCATTGCCGCTAG
AGGCCATGGTCACTCTGTCCAAGGTCAAGCACAGGCCCATCGAGGTGTAGTCGTCAACAT
GGAATCACTTCAGGCACCCAAAACGATAGTTCACACCGGGAAGATGCCTTATGCAGATGT
TTCTGGCGGGGAGCTGTGGATAAATATTCTGCATGAGTCTCTTAAACACGGCCTTGCACC
CAAATCCTGGACAGATTATCTTCATCTGACAGTCGGGGGCACTCTGTCAAATGCAGGAAT
TAGTGGGCAAGCATTCCGGCATGGACCACAGATCAATAACGTCTACCAGCTGGAAGTTGT
CACAGGGAAAGGAGACATAATTACCTGTTCAGAGACGCAGAATGCAGACCTATTTTATGG
AGTTCTTGGAGGATTGGGACAGTTCGGCATCATCACCCGTGCTAGAATTTCTCTTGAACC
AGCACCCAAGATGGTGAAATGGATTAGAGTGCTCTATTCAGAATTCTCCATTTTTTCCAA
GGACCAAGAACACTTGATATCTTTCAAGAATTCGTTTGACTATATTGAAGGATTTGTTAT
AATAAACAGAACTGGCCTGCTTAATACCTGGAGATCTTCCTTCAATCCTGGAGAACCACT
TCAAGCAAGCCAGTTCAATTCAGATGGAAGAACTCTCTACTGCCTGGAAATGGCCAAATA
CTTTAACCCAGATGAGACCCATATTGTGAACCAGGTAATCGAGAGCTTGCTGTCTGAATT
GAGTTATATTCCATCCACACTTTTCCTATCGGAAGTTCCATATGTGGACTTCTTGGATAG
AGTACATGTCTCTGAGATAAAACTCCGTGCGAAAGGATTATGGGAAGTGCCTCACCCATG
GTTGAATCTTCTCATTCCCAAAAGCAGAATTCACGATTTTGCCAAAGAAGTCTTTGGGAA
CATTCTCAGAGACACTGGCAATGGTCCTATACTCATCTACCCAGTTAACAAATCCAAGTG
GAACAATAGAACATCTTTGGTTACTCCACAAGAAGATATTTTCTACCTAGTGGCATTCCT
ATCCTCTGCAGTACCATCTTCCACAGGAACAGATGGCTTAGAGCATATTTTAACACAAAA
CGAAAGGATACTTGATTTCTGTGAAGGGGCCCGTCTGGGGATGAAGCAATATCTGCCCCA
TTACAGCACTCAGGATAAGTGGCAAGCCCACTTTGGCCCTAAATGGGAAGTTTTCGTAAA
GAGGAAATCAACGTATGACCCCTTAGCAATCCTTGCTCCAGGGCAGAGAATCTTCCAAAA
AGCAACATCCTTCTCATGGAGCAGGATTCTCGCATAAGCACATAATTCAAAAAAGGCCTT
TAAGGCATATGGAGAAAAAGCCAGAAAGCCTGAAACTGTACATTAATAATAATTTAGTTT
AAAAGTTTCTTGGA