Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0252g00010.t01
CDS Infomation

cds chromosome:12X:Un:17564928:17571613:1 gene:VIT_00s0252g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATTTTTCTTACAAATCCATATGCACGGTTTCTTTTTTTCAATGGTTTCAGAGGATCT
TCATCTCTCCTGTCGTCCTCCCTTCAGACTGGAAAAAGAGACGCAGTGGCCTGCATCGGG
ATGCACACACGCTCTCTTTCTTCGTCAGTTGAGTTTCTAGAGATTGAATGTGATGAATAT
GGTAATGATGTAAAAGCAGCAGAGAAAGATACTGCACTACGTCTAGCTATCTCCCGACTT
GCGGGTGATTTTGGCAGAGAATCTATGTTGTCACTGCAGCGCTTTTTTGTCTCACGACAT
GCACCAGTGATATCAACAGGATCATTAAAACTGGATCTAGCTCTTGGAATTGGAGGATTA
CCAAAGGGAAGAATAGTAGAAATTTATGGCCAAGAAGCATCGGGCAAGACAACTCTTGCT
CTTCATATTATCAAAGAAGCTCAAAAGCTTGGAGGATATTGTGCATATCTTGATGTAGAG
AATGCAATGAACCCTTCATTTGCAGAATCCATGGGTGTAAATGTAGATAATCTTCTTATT
TCACCTCCGGATTCTGCTGAAAATTTGCTGAGTATGGTTAATACACTGACCAAAAGTGGA
TCGATGGATGTAATTGTGGTTGATAGCGTGGCTGCTCTTGTTCCCCAACATGAACTTGAT
GTTGTGATAGGTGGCACCTACCAAGATGTACAGTCACAAATTATGGCCCAAGCTCTGCGA
AAAATTCATTATTCATTATGCCGGTCCGAAACTCTCATCATTTTTGTTAATCAGGTTAGA
TCAAGTTTGAAATCAAGTCATGGCTTTGGACGCTTGGATGAGGTTACTTGTGGGGGAAAT
GCCTTAAGATTTTATGCAGCTGTGCGGTTGAGAGTTATGAGAACTGGATTGCTGAGGACT
GAGGACAAGGTTACAGGCCTTGGGGTCTGTGTGCAAGTGGTGAAAAATAAACTAGCACAT
GCAACGAAAAAAGCTGATCTGGGGATACAGTTTGGAAGAGGCATTTGCTTTGAATCTGAA
GTCTTAGAACTAGCCTGTGAACATGGAGTCATATGGAAAGAAGGAAGCAAATATATCATA
GAAGGGGAAGCTTTCAATAATAAACAGGAAGCTGAACAGTATATGGCTCAAAACAGTGGG
GTTTTAGAAAGGATAGTCTCATTCCTCAGAAGCCATTTGTTTGAGAGGGAAATATAA

Peptide Sequence

PEP ID

VIT_00s0252g00010.t01
PEP Infomation

pep chromosome:12X:Un:17564928:17571613:1 gene:VIT_00s0252g00010 transcript:VIT_00s0252g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MIFLTNPYARFLFFNGFRGSSSLLSSSLQTGKRDAVACIGMHTRSLSSSVEFLEIECDEY
GNDVKAAEKDTALRLAISRLAGDFGRESMLSLQRFFVSRHAPVISTGSLKLDLALGIGGL
PKGRIVEIYGQEASGKTTLALHIIKEAQKLGGYCAYLDVENAMNPSFAESMGVNVDNLLI
SPPDSAENLLSMVNTLTKSGSMDVIVVDSVAALVPQHELDVVIGGTYQDVQSQIMAQALR
KIHYSLCRSETLIIFVNQVRSSLKSSHGFGRLDEVTCGGNALRFYAAVRLRVMRTGLLRT
EDKVTGLGVCVQVVKNKLAHATKKADLGIQFGRGICFESEVLELACEHGVIWKEGSKYII
EGEAFNNKQEAEQYMAQNSGVLERIVSFLRSHLFEREI

Transcript Sequence

Transcript ID

VIT_00s0252g00010.t01
Transcript Infomation

cdna chromosome:12X:Un:17564928:17571613:1 gene:VIT_00s0252g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATCCTACAAATGGCGCGCCTATGGCATAAAACACCTTCCTACTTCGAAAAGTTGAAACC
CTAGAAATTATGATTTTTCTTACAAATCCATATGCACGGTTTCTTTTTTTCAATGGTTTC
AGAGGATCTTCATCTCTCCTGTCGTCCTCCCTTCAGACTGGAAAAAGAGACGCAGTGGCC
TGCATCGGGATGCACACACGCTCTCTTTCTTCGTCAGTTGAGTTTCTAGAGATTGAATGT
GATGAATATGGTAATGATGTAAAAGCAGCAGAGAAAGATACTGCACTACGTCTAGCTATC
TCCCGACTTGCGGGTGATTTTGGCAGAGAATCTATGTTGTCACTGCAGCGCTTTTTTGTC
TCACGACATGCACCAGTGATATCAACAGGATCATTAAAACTGGATCTAGCTCTTGGAATT
GGAGGATTACCAAAGGGAAGAATAGTAGAAATTTATGGCCAAGAAGCATCGGGCAAGACA
ACTCTTGCTCTTCATATTATCAAAGAAGCTCAAAAGCTTGGAGGATATTGTGCATATCTT
GATGTAGAGAATGCAATGAACCCTTCATTTGCAGAATCCATGGGTGTAAATGTAGATAAT
CTTCTTATTTCACCTCCGGATTCTGCTGAAAATTTGCTGAGTATGGTTAATACACTGACC
AAAAGTGGATCGATGGATGTAATTGTGGTTGATAGCGTGGCTGCTCTTGTTCCCCAACAT
GAACTTGATGTTGTGATAGGTGGCACCTACCAAGATGTACAGTCACAAATTATGGCCCAA
GCTCTGCGAAAAATTCATTATTCATTATGCCGGTCCGAAACTCTCATCATTTTTGTTAAT
CAGGTTAGATCAAGTTTGAAATCAAGTCATGGCTTTGGACGCTTGGATGAGGTTACTTGT
GGGGGAAATGCCTTAAGATTTTATGCAGCTGTGCGGTTGAGAGTTATGAGAACTGGATTG
CTGAGGACTGAGGACAAGGTTACAGGCCTTGGGGTCTGTGTGCAAGTGGTGAAAAATAAA
CTAGCACATGCAACGAAAAAAGCTGATCTGGGGATACAGTTTGGAAGAGGCATTTGCTTT
GAATCTGAAGTCTTAGAACTAGCCTGTGAACATGGAGTCATATGGAAAGAAGGAAGCAAA
TATATCATAGAAGGGGAAGCTTTCAATAATAAACAGGAAGCTGAACAGTATATGGCTCAA
AACAGTGGGGTTTTAGAAAGGATAGTCTCATTCCTCAGAAGCCATTTGTTTGAGAGGGAA
ATATAAATATATAAGGCCCTTGATCATACATTTTACTCATATTTGCCTACATTTGTGAGA
GCCATGCGTCTTTGGACTCTCTGGCCTGAAGGATCTTTGTGAAGGAGACTGCAATGATGT
CTCTTCTTCTCCAGGTAGAAATATTGCTTTTGATGCTAGAAATTAGCATATACAGGATCT
GACATGACATAGATAAACCATAACACATGAAGTTTGCTC