Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0250g00090.t01
CDS Infomation

cds chromosome:12X:Un:17381272:17383051:1 gene:VIT_00s0250g00090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCACCTGCAATGAGCACAGCAATCGAAGCCAACAAGGAAGGTGACCAACCAGAAAGC
CAGTACCAGAAAGGAGTGAAACACCTATGGGACAGTGGCATCACCAGGGTTCCCAACAAG
TACATATTGCCAGCCTCGGACAGACCTGGGTTAACCAGAGATGATAATCAAAGTGGCAAC
CCTAATCTCAAGTTACCCGTCATTGATTTTGCTCACCTGCAAGGCTCAAACAGATCCCAT
GCTCTCAATACCCTTGCCAAAGCTTGCGAGGAGTATGGATTTTTTCAGTTGACAAACCAT
GGTATCCCAAGCGAAGTTATCCTCAACATGGTTGAAGGGAGTAAAAGATTTTTCGAGCTC
CCTTTCGAGGAGAGATCCAAGTACATGTCGACTGATATGTATGCCCCAGTTAGGTATGGA
ACAAGTTTTAACCAGAACAAGGATCGAGTGTTCTGCTGGAGAGATTTTTTGAAGCTAAGC
TGCCAGCCCCTCTCAGGTGTTCTTCCATTTTGGCCCTCTTCGCCTGTGGACTTCAGGCAA
AGCGCTGTTGATTACTCCAAGCAAGCCAAATTCTTGTACCTAGCTCTCACGGAGGCCATC
CTAGAGAGCCTAGGATTGGTGGAAGCCACCACAAAGAACAACGAATATGATAGTTTAAAA
GAATTCCAAGATGGAAGCCAACTCATTGTGGTCAATTGCTACCCTTCCTGCCCTGAACCT
GACCTAACCCTCGGCATGCCACCACATTCAGACTATGGCTTCCTCACACTTCTTCTCCAA
GATGAAGTCAAGGGCCTCCAGATACAGCATGATGGAAGATGGGTAACAGTCGAACCAATC
CCTAACTCATTCGTAGTTAATGTCGGCGACCATCTAGAGATATTTAGCAATGGAAGATAC
AAGAGTGTGCTTCATAGGGTTTTGGTTAATCCTCTCAACTCCCGAATCTCCATTGCTTCC
CTGCACAGTCTTCCCGTCAACAAGACGGTCCAGCCATCGCCAAAACTCATCGATGAAACC
AATCCGAGGCGTTACAAGGACACAAACTTCGCCAGTTTCCTGGACTACATTTCCTCCTGT
GAACCCAAGGGCAAGAATTTCCTGGAATCCAGGAAATTGACTTAA

Peptide Sequence

PEP ID

VIT_00s0250g00090.t01
PEP Infomation

pep chromosome:12X:Un:17381272:17383051:1 gene:VIT_00s0250g00090 transcript:VIT_00s0250g00090.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSPAMSTAIEANKEGDQPESQYQKGVKHLWDSGITRVPNKYILPASDRPGLTRDDNQSGN
PNLKLPVIDFAHLQGSNRSHALNTLAKACEEYGFFQLTNHGIPSEVILNMVEGSKRFFEL
PFEERSKYMSTDMYAPVRYGTSFNQNKDRVFCWRDFLKLSCQPLSGVLPFWPSSPVDFRQ
SAVDYSKQAKFLYLALTEAILESLGLVEATTKNNEYDSLKEFQDGSQLIVVNCYPSCPEP
DLTLGMPPHSDYGFLTLLLQDEVKGLQIQHDGRWVTVEPIPNSFVVNVGDHLEIFSNGRY
KSVLHRVLVNPLNSRISIASLHSLPVNKTVQPSPKLIDETNPRRYKDTNFASFLDYISSC
EPKGKNFLESRKLT

Transcript Sequence

Transcript ID

VIT_00s0250g00090.t01
Transcript Infomation

cdna chromosome:12X:Un:17381272:17383051:1 gene:VIT_00s0250g00090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCACCACACCAATTCTCTCATTATTCTTCATCATTTCTTCACTTCCCTCTCCTATTGCTA
CACCACTTCTTTTACTCTTATTCGTTTTTTCTTTATCGCTCTCTCTCTCTCTCACTCACG
CACACATATATCCTACAGCTAGATTCTTGTATTACCATGTCACCTGCAATGAGCACAGCA
ATCGAAGCCAACAAGGAAGGTGACCAACCAGAAAGCCAGTACCAGAAAGGAGTGAAACAC
CTATGGGACAGTGGCATCACCAGGGTTCCCAACAAGTACATATTGCCAGCCTCGGACAGA
CCTGGGTTAACCAGAGATGATAATCAAAGTGGCAACCCTAATCTCAAGTTACCCGTCATT
GATTTTGCTCACCTGCAAGGCTCAAACAGATCCCATGCTCTCAATACCCTTGCCAAAGCT
TGCGAGGAGTATGGATTTTTTCAGTTGACAAACCATGGTATCCCAAGCGAAGTTATCCTC
AACATGGTTGAAGGGAGTAAAAGATTTTTCGAGCTCCCTTTCGAGGAGAGATCCAAGTAC
ATGTCGACTGATATGTATGCCCCAGTTAGGTATGGAACAAGTTTTAACCAGAACAAGGAT
CGAGTGTTCTGCTGGAGAGATTTTTTGAAGCTAAGCTGCCAGCCCCTCTCAGGTGTTCTT
CCATTTTGGCCCTCTTCGCCTGTGGACTTCAGGCAAAGCGCTGTTGATTACTCCAAGCAA
GCCAAATTCTTGTACCTAGCTCTCACGGAGGCCATCCTAGAGAGCCTAGGATTGGTGGAA
GCCACCACAAAGAACAACGAATATGATAGTTTAAAAGAATTCCAAGATGGAAGCCAACTC
ATTGTGGTCAATTGCTACCCTTCCTGCCCTGAACCTGACCTAACCCTCGGCATGCCACCA
CATTCAGACTATGGCTTCCTCACACTTCTTCTCCAAGATGAAGTCAAGGGCCTCCAGATA
CAGCATGATGGAAGATGGGTAACAGTCGAACCAATCCCTAACTCATTCGTAGTTAATGTC
GGCGACCATCTAGAGATATTTAGCAATGGAAGATACAAGAGTGTGCTTCATAGGGTTTTG
GTTAATCCTCTCAACTCCCGAATCTCCATTGCTTCCCTGCACAGTCTTCCCGTCAACAAG
ACGGTCCAGCCATCGCCAAAACTCATCGATGAAACCAATCCGAGGCGTTACAAGGACACA
AACTTCGCCAGTTTCCTGGACTACATTTCCTCCTGTGAACCCAAGGGCAAGAATTTCCTG
GAATCCAGGAAATTGACTTAAGAGG