Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0250g00020.t01
CDS Infomation

cds chromosome:12X:Un:17252509:17266683:1 gene:VIT_00s0250g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAATTGCCTTCAGAATCTTCCCAGATCCTCCGCTTTGCCTTTGCAAAGCTTCAATTGC
CACGGAAGAAAGGCTATTTGCTCTGTTCACAATCTGGGAGTGATGAATAAGACTGTTGAT
CTACATCGGAGCATAGCCGCGAAGGCAATTTCTGGTTCCATATCTGACACCAAGATGAGT
GATCCTGAATTCAAGGAGGAAAAATCTGAGATCTACAGCAATAACATGACAGAAGCTATG
GGGGCTGTATTGACTTATAGGCATGAGCTAGGAATGAATTACAACTTCATTCGTCCAGAC
TTGATTGTGGGGTCTTGCCTACAGAGTCCAGAAGATGTTGACAAGCTTCGGAGTATTGGG
GTGAAAACCATTTTTTGCTTACAACAAGATTCAGATCTTGAATATTTTGGAGTTGATATC
AATGCCATAATAGAATATGCCAATACATTTGATGACATTCAACACTTGCGAGCTGAAATA
AGGGACTTTGATGCATTTGATTTACGGTTGCAACTTCCAGCTGTGGTGAGCAAATTATAC
AAGGCGATAAATCGAAATGGAGGTGTGACTTATATACACTGCACAGCTGGACTTGGGAGA
GCTCCTGCCGTGGCGTTGGCATACATGTTCTGGGTTCAGGGCTATAAACTTAATGAAGCT
CACAGTTTACTTATGAGCAAGCGCTCGAGCTTCCCAAAGCTGGATGCTATCAAAAGTGCT
ACTGCTGATATACTTACAGACCTCAAAAAGCAGCCTGTTACTTTGAAATGGAAGGATAAC
AGTTGCACCACAGTAGAAATTTCTGGTCTTGATATTGGATGGGGCCAGAGAATGCCTTTG
AGATTTGACAAGGAACAGGATCTGTGGATTCTTGAGAGAGAATTGCCAGAAGGACACTAC
GAGTATAAGTACATTGTTGATGGCGAATGGACGTGTAACGAACATGAGCATGTTAGAGCC
CCCAACAAAGATGGCCATGTCAACAATTATGTTCATGTCTTCGACAGTGATCCACATGGT
GTCAGTGCAGTCCTTCGAAAGAGGCTGACTGGTGATGATGATCCGACTCTTTCAAGGGAT
GAACGACTCAAAATAAGACAGATTCTCGAAGCTTGTTCGGAGGATGATGATGCTTGA

Peptide Sequence

PEP ID

VIT_00s0250g00020.t01
PEP Infomation

pep chromosome:12X:Un:17252509:17266683:1 gene:VIT_00s0250g00020 transcript:VIT_00s0250g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNCLQNLPRSSALPLQSFNCHGRKAICSVHNLGVMNKTVDLHRSIAAKAISGSISDTKMS
DPEFKEEKSEIYSNNMTEAMGAVLTYRHELGMNYNFIRPDLIVGSCLQSPEDVDKLRSIG
VKTIFCLQQDSDLEYFGVDINAIIEYANTFDDIQHLRAEIRDFDAFDLRLQLPAVVSKLY
KAINRNGGVTYIHCTAGLGRAPAVALAYMFWVQGYKLNEAHSLLMSKRSSFPKLDAIKSA
TADILTDLKKQPVTLKWKDNSCTTVEISGLDIGWGQRMPLRFDKEQDLWILERELPEGHY
EYKYIVDGEWTCNEHEHVRAPNKDGHVNNYVHVFDSDPHGVSAVLRKRLTGDDDPTLSRD
ERLKIRQILEACSEDDDA

Transcript Sequence

Transcript ID

VIT_00s0250g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:17252509:17266683:1 gene:VIT_00s0250g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAATCAGTGAAAAGGTCCACTCCAAGTTTTCTCTGCTGAAGATATTTCTCTGGACTATC
GATGAATTGCCTTCAGAATCTTCCCAGATCCTCCGCTTTGCCTTTGCAAAGCTTCAATTG
CCACGGAAGAAAGGCTATTTGCTCTGTTCACAATCTGGGAGTGATGAATAAGACTGTTGA
TCTACATCGGAGCATAGCCGCGAAGGCAATTTCTGGTTCCATATCTGACACCAAGATGAG
TGATCCTGAATTCAAGGAGGAAAAATCTGAGATCTACAGCAATAACATGACAGAAGCTAT
GGGGGCTGTATTGACTTATAGGCATGAGCTAGGAATGAATTACAACTTCATTCGTCCAGA
CTTGATTGTGGGGTCTTGCCTACAGAGTCCAGAAGATGTTGACAAGCTTCGGAGTATTGG
GGTGAAAACCATTTTTTGCTTACAACAAGATTCAGATCTTGAATATTTTGGAGTTGATAT
CAATGCCATAATAGAATATGCCAATACATTTGATGACATTCAACACTTGCGAGCTGAAAT
AAGGGACTTTGATGCATTTGATTTACGGTTGCAACTTCCAGCTGTGGTGAGCAAATTATA
CAAGGCGATAAATCGAAATGGAGGTGTGACTTATATACACTGCACAGCTGGACTTGGGAG
AGCTCCTGCCGTGGCGTTGGCATACATGTTCTGGGTTCAGGGCTATAAACTTAATGAAGC
TCACAGTTTACTTATGAGCAAGCGCTCGAGCTTCCCAAAGCTGGATGCTATCAAAAGTGC
TACTGCTGATATACTTACAGACCTCAAAAAGCAGCCTGTTACTTTGAAATGGAAGGATAA
CAGTTGCACCACAGTAGAAATTTCTGGTCTTGATATTGGATGGGGCCAGAGAATGCCTTT
GAGATTTGACAAGGAACAGGATCTGTGGATTCTTGAGAGAGAATTGCCAGAAGGACACTA
CGAGTATAAGTACATTGTTGATGGCGAATGGACGTGTAACGAACATGAGCATGTTAGAGC
CCCCAACAAAGATGGCCATGTCAACAATTATGTTCATGTCTTCGACAGTGATCCACATGG
TGTCAGTGCAGTCCTTCGAAAGAGGCTGACTGGTGATGATGATCCGACTCTTTCAAGGGA
TGAACGACTCAAAATAAGACAGATTCTCGAAGCTTGTTCGGAGGATGATGATGCTTGAAT
TCAGAAAGCAACACCTAAGGAAAACGGCATTAAAGTTGTTGTACAGTTCATAAGTACCAA
ATCCATGACCATACAACTTTCGCCAGTCTCTCATTTCCAGCTTTCTTTAATGGGGGCAGA
TCTTTGGAGGGAATAAACTATATAAAGAAACCACAAAAAGCCAAAGAGTTGCATGAATGA
ATTATAGCCTTATGGGGATGAATGAATAA