Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0245g00070.t01
CDS Infomation

cds chromosome:12X:Un:17002614:17009425:-1 gene:VIT_00s0245g00070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTCGCTGCTTTCCGTTTCCTCCTCCAGGATATGAAAAGAAGACAAGAAGTGATGAT
ACAGACTTACTTACCAAGGAGAAGCGCAAAGAGAAAAGGCATCAAAAAGATAAGAAGGAC
AAAGACAGGAGAGAACGTAAAGAAAAAAAGGATGAAGAGAGAAGCAAGGAAAAAAACAGA
GAGAAGAAAGACAGAAAAGAGAAGAAAAAAGACAAGAAAGAGAGGAATAGAGATAGAGAA
AAAAACAGGACCTCAGATGAGAAGAGAATTGAAGGGAAACCAGCAAGCTATAATGGGGAG
AAGCCTCGTCCAAACAACTTGCCAGGTGTTGAGATCAGTAATTCTAAAATTGTGCAGGAG
TTGGGCCGGAGACTTGGAGATAAAGATAAAATTGTTGGAAGTCCGATGGTTCAGAAGGTT
ACCCTTACAGATAAGGGAAGACCTGAATTGGAGGGAAGTATGGTGGAGAGCAATATTGGC
AATTCGGCTGATAAAAAAAGGAAGTCTAAAGACAAAAATGACACTGGAAAGGCCAATGGA
CAAGGAAATAAGGTTGAGGCAAGAAATCCTGAAAATGCAGCCGCCCATAACTCTGGTTGG
ATGGATCAACAAAGAATTGAACAGGGCTATATTGGCACTTGGTCTGAGGAAAAAAGGAAG
ACTAATGACAAAAATGATGCTGGGAAGGCCAATGGACAAGGAAACAAAGTTCAGGCAAGA
GTTTCTGAAAATGCAACTGTCCATAACTATGGTTGGATGGATCAAAGAAGAGTTGCACAG
AGCAATATTGGCAACTGGGCTGAGGAAGAAAGGAAGTCTAAAGACAAAAATGATGCTGGG
AAGGCCAATGGACAAGGAAACAAAGTTGAGGCAAGAGGTCCTGAAAATGCAACTGTCCAT
AACTCACCTTGGATGGATCAAAGAAGAACTGGACAGAGCATTGTTGGCAATTGGGCGGAG
GAAAAAAGTAAGACTAAAGACAAAGATGATGCCAGGAAGGCCAATGGACAAGAAAACAAA
GTTGAGGCAAAAGGTCCTGAATCTGCAACTGTACATACCGCTGCTTGGATGGATCAAAGA
AGAATTGAAGGAATGCAGGTTGAGAAGAAGGATGTGGAGAAGCAGGTGAAGGTGAAAGAA
AATAATGAACACAATGGAAGTCATAGTAGAGGCGATAAGAAAAAGGATAAAGATCGAGAA
AAGAAAAGTAAATCAAAGGATAAGCATAGGAATAAGAAGGAAAAGATGGAGAAAATGAAG
GGAAAAAGGGAACCAGATACAAAGCAGACCAAATTAAAAGGAAGCGACCAAGCCTCCATA
GATACTCAAAATATTAAATCAGAAACTCTTTTGAAGGGCAACAGCAAGAGTTTTGCTACC
TCAGGAAATCTTGGCAAGAGAAAGGAGCACGAGACAAATGGACTTTTTCATGAAAATCGC
ATGCAGCCTAATAAGTTGCCAAGACCCATCGCTTCTTCCGATCCAATTGTAGAAAATGGA
TGGAAATCAGATCCAAGCCAAATAATTACCCAATTTGCACCTGAGAAGCAGGTGTTGCCA
TTCAATCATAAGGCTGATATCAAGGAGCACAAGTTTAATGCTTTGGCAGAAACTCAACAT
TCCAACTCAGCCTCAATGAACTCTTCATCTACTACTGTACAAACTACTGAGAAATGTGAA
GCATCTGCCAAACAGCCACATCCGGATTCCAAGTATCTGAGCCAGATACTTTCTGTACCT
AAAATAGAGGAATGTTCCAATTTTGATGACCAGGAATGGCTATTTAGCAGCAAAAATCCT
CAGTCAAAGAACATGGAAGTGGGTTCTTTGGGGTTTGATGGAACAATGCAGGTGTGGGCT
GAGGCATTGCCAATAAAATCTGCTGATGTATCTGCTCTGCCATATGTCATTCCATATTGA

Peptide Sequence

PEP ID

VIT_00s0245g00070.t01
PEP Infomation

pep chromosome:12X:Un:17002614:17009425:-1 gene:VIT_00s0245g00070 transcript:VIT_00s0245g00070.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSRCFPFPPPGYEKKTRSDDTDLLTKEKRKEKRHQKDKKDKDRRERKEKKDEERSKEKNR
EKKDRKEKKKDKKERNRDREKNRTSDEKRIEGKPASYNGEKPRPNNLPGVEISNSKIVQE
LGRRLGDKDKIVGSPMVQKVTLTDKGRPELEGSMVESNIGNSADKKRKSKDKNDTGKANG
QGNKVEARNPENAAAHNSGWMDQQRIEQGYIGTWSEEKRKTNDKNDAGKANGQGNKVQAR
VSENATVHNYGWMDQRRVAQSNIGNWAEEERKSKDKNDAGKANGQGNKVEARGPENATVH
NSPWMDQRRTGQSIVGNWAEEKSKTKDKDDARKANGQENKVEAKGPESATVHTAAWMDQR
RIEGMQVEKKDVEKQVKVKENNEHNGSHSRGDKKKDKDREKKSKSKDKHRNKKEKMEKMK
GKREPDTKQTKLKGSDQASIDTQNIKSETLLKGNSKSFATSGNLGKRKEHETNGLFHENR
MQPNKLPRPIASSDPIVENGWKSDPSQIITQFAPEKQVLPFNHKADIKEHKFNALAETQH
SNSASMNSSSTTVQTTEKCEASAKQPHPDSKYLSQILSVPKIEECSNFDDQEWLFSSKNP
QSKNMEVGSLGFDGTMQVWAEALPIKSADVSALPYVIPY

Transcript Sequence

Transcript ID

VIT_00s0245g00070.t01
Transcript Infomation

cdna chromosome:12X:Un:17002614:17009425:-1 gene:VIT_00s0245g00070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATAATAGTGGTGCTGTGAGGGGGTCATGGAGTGACACCCGAGCTGGAAATGAGTGCAGG
GACATGGTGCATGGACGAGAGTGTAGCTTCTGGTCTGTTCCTGTCTTGGAACGGCACCAC
TGGAGACTAGGAGAAGCTTTTTGGTTGGTAGGAGCGCACTTTGCGAATTCTGGGATCACA
TGCAATGTCTCGCTGCTTTCCGTTTCCTCCTCCAGGATATGAAAAGAAGACAAGAAGTGA
TGATACAGACTTACTTACCAAGGAGAAGCGCAAAGAGAAAAGGCATCAAAAAGATAAGAA
GGACAAAGACAGGAGAGAACGTAAAGAAAAAAAGGATGAAGAGAGAAGCAAGGAAAAAAA
CAGAGAGAAGAAAGACAGAAAAGAGAAGAAAAAAGACAAGAAAGAGAGGAATAGAGATAG
AGAAAAAAACAGGACCTCAGATGAGAAGAGAATTGAAGGGAAACCAGCAAGCTATAATGG
GGAGAAGCCTCGTCCAAACAACTTGCCAGGTGTTGAGATCAGTAATTCTAAAATTGTGCA
GGAGTTGGGCCGGAGACTTGGAGATAAAGATAAAATTGTTGGAAGTCCGATGGTTCAGAA
GGTTACCCTTACAGATAAGGGAAGACCTGAATTGGAGGGAAGTATGGTGGAGAGCAATAT
TGGCAATTCGGCTGATAAAAAAAGGAAGTCTAAAGACAAAAATGACACTGGAAAGGCCAA
TGGACAAGGAAATAAGGTTGAGGCAAGAAATCCTGAAAATGCAGCCGCCCATAACTCTGG
TTGGATGGATCAACAAAGAATTGAACAGGGCTATATTGGCACTTGGTCTGAGGAAAAAAG
GAAGACTAATGACAAAAATGATGCTGGGAAGGCCAATGGACAAGGAAACAAAGTTCAGGC
AAGAGTTTCTGAAAATGCAACTGTCCATAACTATGGTTGGATGGATCAAAGAAGAGTTGC
ACAGAGCAATATTGGCAACTGGGCTGAGGAAGAAAGGAAGTCTAAAGACAAAAATGATGC
TGGGAAGGCCAATGGACAAGGAAACAAAGTTGAGGCAAGAGGTCCTGAAAATGCAACTGT
CCATAACTCACCTTGGATGGATCAAAGAAGAACTGGACAGAGCATTGTTGGCAATTGGGC
GGAGGAAAAAAGTAAGACTAAAGACAAAGATGATGCCAGGAAGGCCAATGGACAAGAAAA
CAAAGTTGAGGCAAAAGGTCCTGAATCTGCAACTGTACATACCGCTGCTTGGATGGATCA
AAGAAGAATTGAAGGAATGCAGGTTGAGAAGAAGGATGTGGAGAAGCAGGTGAAGGTGAA
AGAAAATAATGAACACAATGGAAGTCATAGTAGAGGCGATAAGAAAAAGGATAAAGATCG
AGAAAAGAAAAGTAAATCAAAGGATAAGCATAGGAATAAGAAGGAAAAGATGGAGAAAAT
GAAGGGAAAAAGGGAACCAGATACAAAGCAGACCAAATTAAAAGGAAGCGACCAAGCCTC
CATAGATACTCAAAATATTAAATCAGAAACTCTTTTGAAGGGCAACAGCAAGAGTTTTGC
TACCTCAGGAAATCTTGGCAAGAGAAAGGAGCACGAGACAAATGGACTTTTTCATGAAAA
TCGCATGCAGCCTAATAAGTTGCCAAGACCCATCGCTTCTTCCGATCCAATTGTAGAAAA
TGGATGGAAATCAGATCCAAGCCAAATAATTACCCAATTTGCACCTGAGAAGCAGGTGTT
GCCATTCAATCATAAGGCTGATATCAAGGAGCACAAGTTTAATGCTTTGGCAGAAACTCA
ACATTCCAACTCAGCCTCAATGAACTCTTCATCTACTACTGTACAAACTACTGAGAAATG
TGAAGCATCTGCCAAACAGCCACATCCGGATTCCAAGTATCTGAGCCAGATACTTTCTGT
ACCTAAAATAGAGGAATGTTCCAATTTTGATGACCAGGAATGGCTATTTAGCAGCAAAAA
TCCTCAGTCAAAGAACATGGAAGTGGGTTCTTTGGGGTTTGATGGAACAATGCAGGTGTG
GGCTGAGGCATTGCCAATAAAATCTGCTGATGTATCTGCTCTGCCATATGTCATTCCATA
TTGA