Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0229g00160.t01
CDS Infomation

cds chromosome:12X:Un:15514614:15523933:-1 gene:VIT_00s0229g00160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGCCTCCGACGAAGACTCTCCACGAGCTTGCCCCAACTTCTTGGATTCACAAACAGG
TCCTTCAAATCTCTGAAATTTCCCCAACAGTCCCTTCATTGCTTCAACTCTTCTAGTGAA
TCCAGTCTCGCCCATGGAATCCACGTCTTTCATTGCCCAGATGGAGTCGGAATCGTCGCC
AAACTCTCCGATTGTATCGCTTCCAGAGGCGGAAACATACTGGGGGCTGATATTTTCGTG
CCTGAAAACAAAAAAGTTTTTTATTCAAGAAGTGAGTTTATTTTTGACCCTGCGAAGTGG
CCACGAGCGCAAATGGATGAGGACTTCCTAAAACTATCAAATATGTTCAATGCAATGAAA
TCTGTTGTTCGAGTGCCTATTCTTGACCCCAAATATAAGATTTCTGTTCTTGCATCAAAA
CAGGACCATTGTTTGGTCGATCTTTTACATGGATGGCAGGATGGAAGGCTTCCAGTAGAT
ATAACTTGTGTAATAAGTAATCATGATAGAGGTCCAAACACCCATGTGTTCCGCTTTCTT
GAAAGGCATGGAATCCCGTATCATTATTTGCATACAACTAAAGAGAATAAAAGGGAAGGG
GAGATTTTGGATTTGGTTCAGGACACAGATTTCCTAGTACTTGCTAGATACATGCAGATA
TTATCTGGAAATTTTTTGAAGAGTTATGGGAAGGATATTATTAACATTCATCATGGTCTT
TTGCCATCATTCAAGGGTGGGAATCCTTCTAAGCAGGCCTTTGATGCTGGAGTCAAATTG
ATTGGTGCAACAAGCCACTTTGTAACTGAAGAACTTGACGCTGGGCCAATTATTGGACAA
ATGGTTGAGAGAGTTTGCCATAGAGATAACTTGAAGAGTTTTGTGCAGAAATCAGAGAAC
CTAGAGAAGCAATGCCTTGTTAAGGCCATAAAATCATATTGTGAGTTGCGGGTGCTACCT
TATGAGGATAACAAAACTGTTGTGTTTTGA

Peptide Sequence

PEP ID

VIT_00s0229g00160.t01
PEP Infomation

pep chromosome:12X:Un:15514614:15523933:-1 gene:VIT_00s0229g00160 transcript:VIT_00s0229g00160.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSLRRRLSTSLPQLLGFTNRSFKSLKFPQQSLHCFNSSSESSLAHGIHVFHCPDGVGIVA
KLSDCIASRGGNILGADIFVPENKKVFYSRSEFIFDPAKWPRAQMDEDFLKLSNMFNAMK
SVVRVPILDPKYKISVLASKQDHCLVDLLHGWQDGRLPVDITCVISNHDRGPNTHVFRFL
ERHGIPYHYLHTTKENKREGEILDLVQDTDFLVLARYMQILSGNFLKSYGKDIINIHHGL
LPSFKGGNPSKQAFDAGVKLIGATSHFVTEELDAGPIIGQMVERVCHRDNLKSFVQKSEN
LEKQCLVKAIKSYCELRVLPYEDNKTVVF

Transcript Sequence

Transcript ID

VIT_00s0229g00160.t01
Transcript Infomation

cdna chromosome:12X:Un:15514614:15523933:-1 gene:VIT_00s0229g00160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGAACGACAATGAGCCTCCGACGAAGACTCTCCACGAGCTTGCCCCAACTTCTTGGAT
TCACAAACAGGTCCTTCAAATCTCTGAAATTTCCCCAACAGTCCCTTCATTGCTTCAACT
CTTCTAGTGAATCCAGTCTCGCCCATGGAATCCACGTCTTTCATTGCCCAGATGGAGTCG
GAATCGTCGCCAAACTCTCCGATTGTATCGCTTCCAGAGGCGGAAACATACTGGGGGCTG
ATATTTTCGTGCCTGAAAACAAAAAAGTTTTTTATTCAAGAAGTGAGTTTATTTTTGACC
CTGCGAAGTGGCCACGAGCGCAAATGGATGAGGACTTCCTAAAACTATCAAATATGTTCA
ATGCAATGAAATCTGTTGTTCGAGTGCCTATTCTTGACCCCAAATATAAGATTTCTGTTC
TTGCATCAAAACAGGACCATTGTTTGGTCGATCTTTTACATGGATGGCAGGATGGAAGGC
TTCCAGTAGATATAACTTGTGTAATAAGTAATCATGATAGAGGTCCAAACACCCATGTGT
TCCGCTTTCTTGAAAGGCATGGAATCCCGTATCATTATTTGCATACAACTAAAGAGAATA
AAAGGGAAGGGGAGATTTTGGATTTGGTTCAGGACACAGATTTCCTAGTACTTGCTAGAT
ACATGCAGATATTATCTGGAAATTTTTTGAAGAGTTATGGGAAGGATATTATTAACATTC
ATCATGGTCTTTTGCCATCATTCAAGGGTGGGAATCCTTCTAAGCAGGCCTTTGATGCTG
GAGTCAAATTGATTGGTGCAACAAGCCACTTTGTAACTGAAGAACTTGACGCTGGGCCAA
TTATTGGACAAATGGTTGAGAGAGTTTGCCATAGAGATAACTTGAAGAGTTTTGTGCAGA
AATCAGAGAACCTAGAGAAGCAATGCCTTGTTAAGGCCATAAAATCATATTGTGAGTTGC
GGGTGCTACCTTATGAGGATAACAAAACTGTTGTGTTTTGAGGGGAAAATGGGGAAAAAA
GAGCACTTTGAAAGAAAGGGAGTGCAATTTTGTATATTTCTTACAATGCTTCATTGAAGA
TATTCTATTTTAATATATCCTGCCAATAAATTAAGTGCATATA