Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0229g00100.t01
CDS Infomation

cds chromosome:12X:Un:15443803:15450591:1 gene:VIT_00s0229g00100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTGGGGGTGGAGGTGGAGGTGGTTGCGGAGAAATGGGCATAGCCAAGGCTTGGAGG
TACAGCACATTTTCGGCGAAGTTGGCTTTGGAGCAGCAGCATAAGCATGTGTGCTGGAGA
TCACAGAAGAGGCCGATCTCGTGGTCGATCATCTGCGGTTTGATGTTGTTTTGTTTGGGT
TTGATTTCGCTCTTCACTGGACATGTGGCTTCTGATCTTGAATGGTACTCGCAGCGCTTG
GTCAAGCGGAGTTTATACTCCAAACTGGATATGGGTCGTCGTGCATCAATTAATATTTGG
AAATCAGAGTCTTCAAAGTTCTACTATGGATGCAGTAAAAAAGGCCGTCATTTTGCTTCT
GCTGTACGCGAGAAGTCGTCAAATGGCTATTTGCTTATTGCAGCAAGTGGAGGGCTGAAC
CAACAAAGAACAGGAATAACCGATGCTGTAGTAGTTGCTCGGATTCTTAATGCTACATTA
GTTGTACCAGAGTTGGATCATCATTCCTTCTGGAAAGATGATAGTGACTTTGTCAACATT
TTTGATGTTGATTGGTTCATTTCTTCCCTTGCAAAGGACGTGACTATTGTTAAAAGAGTT
CCAGATAAAGTCATGAGATCAATGGAAAAACCTCCATACACCATGCGTGTACCAAGGAAA
TCCACTCCTGAATATTATCTGGATCAAGTTCTGCCAATACTCTTGAGGAGACGTGTTGTA
CAGTTGACAAAGTTTGATTACAGGCTTGCAAATAACATTGATGAAGAGCTGCAAAAGTTG
CGTTGCCGGGTCAATTATCATGCTTTAAGATTCACAAAGCCCATACAAGAACTGGGTCAG
AAACTTGTATTAAGAATGCGAAAGATGACAAATCGTTTTATTGCAGTTCACTTGAGGTTT
GAAGCTGATATGCTAGCATTTTCTGGATGCTACTATGGTGGGGGTGAAAAGGAGAGATAT
GAGCTTGGTGAAATAAGGAAACGCTGGGCAACATTACCTGATCTAAGCCCTGAGGGGGAA
CGAAAGCGAGGAAAATGTCCACTGACTCCTCATGAGGTGGGTTTGATGCTGCGGGCACTT
GGCTTTGGAAATGAAACATATCTCTATGTTGCATCAGGAGAAATATATGGTGGAGAAGAG
ACTTTGCAGCCTCTCAGAGAACTTTTCCCAAACTTCTATACAAAGGAGATGCTTGCCAGT
GAAGAACTCAAACCCTTCCTTCCCTACTCTTCTCGCCTTGCTGCCATTGATTACATTGTC
TCAGATGAGAGCGATGTGTTTGTCACCAATAATAACGGAAATATGGCCAAGATTCTTGCA
GGAAGAAGGAGGTACATGGGGCATAAGAGGACCATCAGGCCAAATGCAAAAAAGCTCAGT
GCTTTGTTCATGGCTCGGAATAAGATGGACTGGGATACATTTGCCAAGAAGGTAAAATCA
TACCAGAGAGGATTCATGGGAGAGCCAGATGAGATGAGATCAGGAAGAGGCGAGTTCCAT
GAATTTCCATATTCTTGTGTCTGCCACAAACCATTCAAATACCCTGATGATGAAAACAAT
AATAACGAACAAGTTACTCTAGTCTCTAGAGCATATATTGGATCTGGATCTGAATGGGAG
AATAAAGGTTCAAACAGTTTGCAGAGACTAAAAGAAAACCCAGGAGAAGGACCAGTGACT
TTAGGCGACACTAACGATGATGGCTTTTTGGCAGACTGA

Peptide Sequence

PEP ID

VIT_00s0229g00100.t01
PEP Infomation

pep chromosome:12X:Un:15443803:15450591:1 gene:VIT_00s0229g00100 transcript:VIT_00s0229g00100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGGGGGGGGCGEMGIAKAWRYSTFSAKLALEQQHKHVCWRSQKRPISWSIICGLMLFCLG
LISLFTGHVASDLEWYSQRLVKRSLYSKLDMGRRASINIWKSESSKFYYGCSKKGRHFAS
AVREKSSNGYLLIAASGGLNQQRTGITDAVVVARILNATLVVPELDHHSFWKDDSDFVNI
FDVDWFISSLAKDVTIVKRVPDKVMRSMEKPPYTMRVPRKSTPEYYLDQVLPILLRRRVV
QLTKFDYRLANNIDEELQKLRCRVNYHALRFTKPIQELGQKLVLRMRKMTNRFIAVHLRF
EADMLAFSGCYYGGGEKERYELGEIRKRWATLPDLSPEGERKRGKCPLTPHEVGLMLRAL
GFGNETYLYVASGEIYGGEETLQPLRELFPNFYTKEMLASEELKPFLPYSSRLAAIDYIV
SDESDVFVTNNNGNMAKILAGRRRYMGHKRTIRPNAKKLSALFMARNKMDWDTFAKKVKS
YQRGFMGEPDEMRSGRGEFHEFPYSCVCHKPFKYPDDENNNNEQVTLVSRAYIGSGSEWE
NKGSNSLQRLKENPGEGPVTLGDTNDDGFLAD

Transcript Sequence

Transcript ID

VIT_00s0229g00100.t01
Transcript Infomation

cdna chromosome:12X:Un:15443803:15450591:1 gene:VIT_00s0229g00100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGAGATGGGTGGGGGTGGAGGTGGAGGTGGTTGCGGAGAAATGGGCATAGCCAAGGCTTG
GAGGTACAGCACATTTTCGGCGAAGTTGGCTTTGGAGCAGCAGCATAAGCATGTGTGCTG
GAGATCACAGAAGAGGCCGATCTCGTGGTCGATCATCTGCGGTTTGATGTTGTTTTGTTT
GGGTTTGATTTCGCTCTTCACTGGACATGTGGCTTCTGATCTTGAATGGTACTCGCAGCG
CTTGGTCAAGCGGAGTTTATACTCCAAACTGGATATGGGTCGTCGTGCATCAATTAATAT
TTGGAAATCAGAGTCTTCAAAGTTCTACTATGGATGCAGTAAAAAAGGCCGTCATTTTGC
TTCTGCTGTACGCGAGAAGTCGTCAAATGGCTATTTGCTTATTGCAGCAAGTGGAGGGCT
GAACCAACAAAGAACAGGAATAACCGATGCTGTAGTAGTTGCTCGGATTCTTAATGCTAC
ATTAGTTGTACCAGAGTTGGATCATCATTCCTTCTGGAAAGATGATAGTGACTTTGTCAA
CATTTTTGATGTTGATTGGTTCATTTCTTCCCTTGCAAAGGACGTGACTATTGTTAAAAG
AGTTCCAGATAAAGTCATGAGATCAATGGAAAAACCTCCATACACCATGCGTGTACCAAG
GAAATCCACTCCTGAATATTATCTGGATCAAGTTCTGCCAATACTCTTGAGGAGACGTGT
TGTACAGTTGACAAAGTTTGATTACAGGCTTGCAAATAACATTGATGAAGAGCTGCAAAA
GTTGCGTTGCCGGGTCAATTATCATGCTTTAAGATTCACAAAGCCCATACAAGAACTGGG
TCAGAAACTTGTATTAAGAATGCGAAAGATGACAAATCGTTTTATTGCAGTTCACTTGAG
GTTTGAAGCTGATATGCTAGCATTTTCTGGATGCTACTATGGTGGGGGTGAAAAGGAGAG
ATATGAGCTTGGTGAAATAAGGAAACGCTGGGCAACATTACCTGATCTAAGCCCTGAGGG
GGAACGAAAGCGAGGAAAATGTCCACTGACTCCTCATGAGGTGGGTTTGATGCTGCGGGC
ACTTGGCTTTGGAAATGAAACATATCTCTATGTTGCATCAGGAGAAATATATGGTGGAGA
AGAGACTTTGCAGCCTCTCAGAGAACTTTTCCCAAACTTCTATACAAAGGAGATGCTTGC
CAGTGAAGAACTCAAACCCTTCCTTCCCTACTCTTCTCGCCTTGCTGCCATTGATTACAT
TGTCTCAGATGAGAGCGATGTGTTTGTCACCAATAATAACGGAAATATGGCCAAGATTCT
TGCAGGAAGAAGGAGGTACATGGGGCATAAGAGGACCATCAGGCCAAATGCAAAAAAGCT
CAGTGCTTTGTTCATGGCTCGGAATAAGATGGACTGGGATACATTTGCCAAGAAGGTAAA
ATCATACCAGAGAGGATTCATGGGAGAGCCAGATGAGATGAGATCAGGAAGAGGCGAGTT
CCATGAATTTCCATATTCTTGTGTCTGCCACAAACCATTCAAATACCCTGATGATGAAAA
CAATAATAACGAACAAGTTACTCTAGTCTCTAGAGCATATATTGGATCTGGATCTGAATG
GGAGAATAAAGGTTCAAACAGTTTGCAGAGACTAAAAGAAAACCCAGGAGAAGGACCAGT
GACTTTAGGCGACACTAACGATGATGGCTTTTTGGCAGACTGAAAATCCTCAGGTAATGC
TGTGGCCAGAATATGTTTTCTTATTTGAGTCAGTGTTGGCTCAGACATTGAGGCTCCTGT
GTGTTAATGGTAGCACAAAATTTTACTCAGCTGTGGCATTTGAGTGAAGCCAGACCAAGA
AGTGGACTCTGGTTTCGTTTAATATATCTGGCTAGATCACTGAATCTGTGTATAGAAAAG
AAGGAAACTTCTACCCAGCTTCAATTGTCTATAAACATTTTTGCTTAGTACATAGCTATG
TAGGTATGCCAAAATAGCTTCTTTCTCGTCGAACAAACAATTGGGATGTTTTATTTTAAT
TTATTTTTAATTTTAAATCATATTATTGTTTCCGGAAA