Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0229g00050.t01
CDS Infomation

cds chromosome:12X:Un:15415314:15416392:-1 gene:VIT_00s0229g00050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAAGCACAAATGCAAGCTCTGTTCAAGGAGGTTCTCCAGTGGCAGAGCTTTGGGT
GGTCACATGAGGTCTCACCTAGCCACCCTCCCCATTCCTCCGAAGACCCCGCAACACAGT
GACCGGACCGACCCTGTTTCCTCTTCCTCTTCCTCTTCTTCCAGTGAGGAAGAAGAGGAG
GGGGAGGAGCAAAGATCAGAAGGAGAGGAGAAGGCTCTGGCTTATGGGTTGAGGGAGAAT
CCCAAGAGGAGTTTTAGATTGGCAGATCCTGAGTTTTCGTTCGCTGTGGATGCTGGGTCT
GTGGTCCAGGACCGCGAGAGCGAGACCGAGTCCAGGAACCCAACTCGGAGGCGATCCAAA
CGAGCTTGGAAACTGGGTGTGCCCAACCAGGGACTGGATTTGAAGAAACCTAAATTGGGA
AAATCGGAGACCACCGAGTCGCCGACTGAGCTGGAGCCGGTGAGTTCAGTTTCCAACACT
TGGCCTGAAGAGGATATTGCTATGTGCCTGGTGATGCTTTCGAGGGATACGTGGACCAGA
AGCGATGAAGATCAAGACATTAAAGATGAAGAAGAAAGATCAGTTGATGAAACATGCAAG
AAGGTGTTCTCATCCTTTGAAGCATCCCCAGTTGAAAAAGTCGTGAACAAAGCCAGTAAG
AAGAAGATCAAAGCCTGTTTTGAAGACGAATCAAATCCAGAAAACGGAGGTAATGTGAAA
ATTTATGAGTGCCCATTTTGCAGTAGAGTGTTCAGGTCTGGCCAAGCATTGGGTGGGCAC
AAGAGATCACACCTCCTCAATAATTCAACCACCACAACTGCCGCCGCTGCCGCTGCCGCT
TCTGCGAATTCTGAGAAATTCCAGAATGGGGTGATAGATCTCAATCTCCCTGCTCCACCT
GAAGATTATGCCTTTAGTCAGCACTCTGCAGTTTCATATGCAGAGTTCATTGCCAATACC
ATAAAATGTTGA

Peptide Sequence

PEP ID

VIT_00s0229g00050.t01
PEP Infomation

pep chromosome:12X:Un:15415314:15416392:-1 gene:VIT_00s0229g00050 transcript:VIT_00s0229g00050.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEKHKCKLCSRRFSSGRALGGHMRSHLATLPIPPKTPQHSDRTDPVSSSSSSSSSEEEEE
GEEQRSEGEEKALAYGLRENPKRSFRLADPEFSFAVDAGSVVQDRESETESRNPTRRRSK
RAWKLGVPNQGLDLKKPKLGKSETTESPTELEPVSSVSNTWPEEDIAMCLVMLSRDTWTR
SDEDQDIKDEEERSVDETCKKVFSSFEASPVEKVVNKASKKKIKACFEDESNPENGGNVK
IYECPFCSRVFRSGQALGGHKRSHLLNNSTTTTAAAAAAASANSEKFQNGVIDLNLPAPP
EDYAFSQHSAVSYAEFIANTIKC

Transcript Sequence

Transcript ID

VIT_00s0229g00050.t01
Transcript Infomation

cdna chromosome:12X:Un:15415314:15416392:-1 gene:VIT_00s0229g00050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGTGGAATGCTTGTCACCTACTCCTTTTTAAGTTCCCAAATCGCTTGATACTTCTCAAGC
TGTGTCTCTTTTCCCCCAGAGACTGCAAAGCTCTGATCTTTGCTTCAATGGAGAAGCACA
AATGCAAGCTCTGTTCAAGGAGGTTCTCCAGTGGCAGAGCTTTGGGTGGTCACATGAGGT
CTCACCTAGCCACCCTCCCCATTCCTCCGAAGACCCCGCAACACAGTGACCGGACCGACC
CTGTTTCCTCTTCCTCTTCCTCTTCTTCCAGTGAGGAAGAAGAGGAGGGGGAGGAGCAAA
GATCAGAAGGAGAGGAGAAGGCTCTGGCTTATGGGTTGAGGGAGAATCCCAAGAGGAGTT
TTAGATTGGCAGATCCTGAGTTTTCGTTCGCTGTGGATGCTGGGTCTGTGGTCCAGGACC
GCGAGAGCGAGACCGAGTCCAGGAACCCAACTCGGAGGCGATCCAAACGAGCTTGGAAAC
TGGGTGTGCCCAACCAGGGACTGGATTTGAAGAAACCTAAATTGGGAAAATCGGAGACCA
CCGAGTCGCCGACTGAGCTGGAGCCGGTGAGTTCAGTTTCCAACACTTGGCCTGAAGAGG
ATATTGCTATGTGCCTGGTGATGCTTTCGAGGGATACGTGGACCAGAAGCGATGAAGATC
AAGACATTAAAGATGAAGAAGAAAGATCAGTTGATGAAACATGCAAGAAGGTGTTCTCAT
CCTTTGAAGCATCCCCAGTTGAAAAAGTCGTGAACAAAGCCAGTAAGAAGAAGATCAAAG
CCTGTTTTGAAGACGAATCAAATCCAGAAAACGGAGGTAATGTGAAAATTTATGAGTGCC
CATTTTGCAGTAGAGTGTTCAGGTCTGGCCAAGCATTGGGTGGGCACAAGAGATCACACC
TCCTCAATAATTCAACCACCACAACTGCCGCCGCTGCCGCTGCCGCTTCTGCGAATTCTG
AGAAATTCCAGAATGGGGTGATAGATCTCAATCTCCCTGCTCCACCTGAAGATTATGCCT
TTAGTCAGCACTCTGCAGTTTCATATGCAGAGTTCATTGCCAATACCATAAAATGTTGA