Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_00s0227g00060.t01
CDS Infomation	cds chromosome:12X:Un:15011972:15019920:1 gene:VIT_00s0227g00060 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosome biogenesis protein BOP1 homolog [Source:UniProtKB/TrEMBL;Acc:F6HCQ7]
Sequence	ATGGCGAAGAGAGAGACTCCTCGGTTGGACTCACTGAATAAGAAGAAAAAGGAGAAGGAG AAGAAGGAGGAGAGTTCAAAACATCAACAGGAAGAGAATGTTGATGATAAACAGCTTCAT CAGGGTTTTTCTGGAGATGAAGAAGAACTGACGGAATCAGAATCAGATGGACCTGTCCTC TCAGAAGACGAGGACTATGTTAGTGCAGATGGAGATGATAGTTTGCATAATGACCCTAGT GAAGAAAATGAGGGTGGGAGCAGCGAATCTCATCAAGGAATCGAAGAGAGTGATTCATCT GAAGATGAGGTGGCTCCTCGAAATACAATTGGAGATGTTCCCCTGGAATGGTATAAAGAT GAGGAGCATGTTGGATATGACATTGCTGGGAAGAAGATAAAGAAGAAAGTTAGACAAGAT AAACTTGATTCTTTTCTAGCGAGTGCTGATGACTCAAAGAATTGGCGCAAAATTTATGAT GAGTATAATGATGAGGAAGTGGAGTTAACAAAACGTGAAACTAGATTAATACGTAGATTG CTCAAAGGAAAGGCACCACATGCTGAATTTGATCCATATGCGCCTTATGTTGACTGGTTT AAATGGGATGATGCTAAGCATCCACTGTCCAATGCACCGGAACCAAAGAGGCGGTTCATT CCTTCAAAATGGGAAAGTAAAAAGGTTGTTGAATATGTTAGAGCAATTAGAAAGGGATTA ATAAAGTTTGACAAGCCAAAAGAAGAACCACGTGTTTATCATTTGTGGGGAGATGATTCC AGCTCAACAGAAAAGGCTGGCCATGGGTTAGCTTATATTCCTGCCCCAAAGTCGAAGCTG CCAGGCCACGAGGAGTCATATAATCCTTCTTTAGAATACATCCCAACACAAGAAGAGATT AATTCTTATCAGCTTATGTATGAGGAAGACCGCCCTAAATTTATTCCAAGAAGGTTTTTG TCTCTAAGAAGTGTCCCTGCATATGAGAATGCGGTCAAGGAATCATTTGATCGCTGTTTG GACCTATATTTATGTCCTAGAGCCCGGAAGAAACGTATCAATATTGATCCCGAATCTTTG AAGCCCAAACTACCTAGTCGAAAAGATCTTAAGCCTTACCCAGTAACATGCTATCTCGAG TATAAAGGTCACAAGGGTGCAGTTATGTCAATTGCTACTGAAGCATCAGGACAATGGATT GCTTCTGGTTCAATTGATGGATCTGTACGTGTTTGGGAGGTTGAAACTGGTAGATGCCGT CGAGTCTGGGAGATTGGTGAAGCTGTCCATTACGTGGCATGGAATCCTTTGCCTGGGCTT CATATTTTGGCCGTCTCCTCGGGACAAGATGTGCTTCTTTTGAACACTGGATTGGGGAAT GATGAAGAACAAAAAAATATTGAACAACTTCTTCGCATTGAGACACCTGGTTCAATGGAT GACACTGGCAACACCACATCCATTGTGAGCTGGGTTCAAGATGATAAGCATGGTGGAATC AGGCTAAAGCATTTTAAGACTGTTTCTTCAGTAGAATGGCACCGCAAAGGAGACTACTTA TCAACAGTAATGCCAGCTGATATCCTTTTAATGATTTTATTTTCAATACTTATTCACCAG CTCTCTAAGAAGCTTACCCAAAGAATTCCATTCAAGTTGCATGGTCTTCCAGTTTCATCA ATTTTTCATCCAACGCGTTCGATCTTCTTCATTTCAACAAAGAAGAATGTTCGAGTATAT GACTTATTGAAGCAGAAGCTCGTTAAGAAGCTTGAGACTGGGCTCCGTGAGGTGTCTTCA ATTGCAGTTCATCCTGCTGGTGATAATGTAATTGTTGGGAGCAGAGAGGGAAAGTTGTGT TGGTTTGACATGGACCTTTCATCTCAACCTTACAGGATTCTCAAGTGTCACCCTAAAGAC ATTACCAATGTGGCTTTCCATCATTCATACCCTCTCTTTGCAACATGCTCTGATGATTGT ACTGCATATGTTTTTCATGGCATGGTTTACTCTGATCTTAATCAGAATCCTCTTATTGTT CCCTTGGAAATTCTTAGAGGGCATTCCAGCACAAATGGAAGAGGTTAG

Peptide Sequence

PEP ID	VIT_00s0227g00060.t01
PEP Infomation	pep chromosome:12X:Un:15011972:15019920:1 gene:VIT_00s0227g00060 transcript:VIT_00s0227g00060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosome biogenesis protein BOP1 homolog [Source:UniProtKB/TrEMBL;Acc:F6HCQ7]
Sequence	MAKRETPRLDSLNKKKKEKEKKEESSKHQQEENVDDKQLHQGFSGDEEELTESESDGPVL SEDEDYVSADGDDSLHNDPSEENEGGSSESHQGIEESDSSEDEVAPRNTIGDVPLEWYKD EEHVGYDIAGKKIKKKVRQDKLDSFLASADDSKNWRKIYDEYNDEEVELTKRETRLIRRL LKGKAPHAEFDPYAPYVDWFKWDDAKHPLSNAPEPKRRFIPSKWESKKVVEYVRAIRKGL IKFDKPKEEPRVYHLWGDDSSSTEKAGHGLAYIPAPKSKLPGHEESYNPSLEYIPTQEEI NSYQLMYEEDRPKFIPRRFLSLRSVPAYENAVKESFDRCLDLYLCPRARKKRINIDPESL KPKLPSRKDLKPYPVTCYLEYKGHKGAVMSIATEASGQWIASGSIDGSVRVWEVETGRCR RVWEIGEAVHYVAWNPLPGLHILAVSSGQDVLLLNTGLGNDEEQKNIEQLLRIETPGSMD DTGNTTSIVSWVQDDKHGGIRLKHFKTVSSVEWHRKGDYLSTVMPADILLMILFSILIHQ LSKKLTQRIPFKLHGLPVSSIFHPTRSIFFISTKKNVRVYDLLKQKLVKKLETGLREVSS IAVHPAGDNVIVGSREGKLCWFDMDLSSQPYRILKCHPKDITNVAFHHSYPLFATCSDDC TAYVFHGMVYSDLNQNPLIVPLEILRGHSSTNGRG

Transcript Sequence

Transcript ID	VIT_00s0227g00060.t01
Transcript Infomation	cdna chromosome:12X:Un:15011972:15019920:1 gene:VIT_00s0227g00060 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosome biogenesis protein BOP1 homolog [Source:UniProtKB/TrEMBL;Acc:F6HCQ7]
Sequence	CCGCCCACAACACAACGGACCTTCTCCCTCAGCCTCCGCGTAGAGGGAAACAGAGATGGC GAAGAGAGAGACTCCTCGGTTGGACTCACTGAATAAGAAGAAAAAGGAGAAGGAGAAGAA GGAGGAGAGTTCAAAACATCAACAGGAAGAGAATGTTGATGATAAACAGCTTCATCAGGG TTTTTCTGGAGATGAAGAAGAACTGACGGAATCAGAATCAGATGGACCTGTCCTCTCAGA AGACGAGGACTATGTTAGTGCAGATGGAGATGATAGTTTGCATAATGACCCTAGTGAAGA AAATGAGGGTGGGAGCAGCGAATCTCATCAAGGAATCGAAGAGAGTGATTCATCTGAAGA TGAGGTGGCTCCTCGAAATACAATTGGAGATGTTCCCCTGGAATGGTATAAAGATGAGGA GCATGTTGGATATGACATTGCTGGGAAGAAGATAAAGAAGAAAGTTAGACAAGATAAACT TGATTCTTTTCTAGCGAGTGCTGATGACTCAAAGAATTGGCGCAAAATTTATGATGAGTA TAATGATGAGGAAGTGGAGTTAACAAAACGTGAAACTAGATTAATACGTAGATTGCTCAA AGGAAAGGCACCACATGCTGAATTTGATCCATATGCGCCTTATGTTGACTGGTTTAAATG GGATGATGCTAAGCATCCACTGTCCAATGCACCGGAACCAAAGAGGCGGTTCATTCCTTC AAAATGGGAAAGTAAAAAGGTTGTTGAATATGTTAGAGCAATTAGAAAGGGATTAATAAA GTTTGACAAGCCAAAAGAAGAACCACGTGTTTATCATTTGTGGGGAGATGATTCCAGCTC AACAGAAAAGGCTGGCCATGGGTTAGCTTATATTCCTGCCCCAAAGTCGAAGCTGCCAGG CCACGAGGAGTCATATAATCCTTCTTTAGAATACATCCCAACACAAGAAGAGATTAATTC TTATCAGCTTATGTATGAGGAAGACCGCCCTAAATTTATTCCAAGAAGGTTTTTGTCTCT AAGAAGTGTCCCTGCATATGAGAATGCGGTCAAGGAATCATTTGATCGCTGTTTGGACCT ATATTTATGTCCTAGAGCCCGGAAGAAACGTATCAATATTGATCCCGAATCTTTGAAGCC CAAACTACCTAGTCGAAAAGATCTTAAGCCTTACCCAGTAACATGCTATCTCGAGTATAA AGGTCACAAGGGTGCAGTTATGTCAATTGCTACTGAAGCATCAGGACAATGGATTGCTTC TGGTTCAATTGATGGATCTGTACGTGTTTGGGAGGTTGAAACTGGTAGATGCCGTCGAGT CTGGGAGATTGGTGAAGCTGTCCATTACGTGGCATGGAATCCTTTGCCTGGGCTTCATAT TTTGGCCGTCTCCTCGGGACAAGATGTGCTTCTTTTGAACACTGGATTGGGGAATGATGA AGAACAAAAAAATATTGAACAACTTCTTCGCATTGAGACACCTGGTTCAATGGATGACAC TGGCAACACCACATCCATTGTGAGCTGGGTTCAAGATGATAAGCATGGTGGAATCAGGCT AAAGCATTTTAAGACTGTTTCTTCAGTAGAATGGCACCGCAAAGGAGACTACTTATCAAC AGTAATGCCAGCTGATATCCTTTTAATGATTTTATTTTCAATACTTATTCACCAGCTCTC TAAGAAGCTTACCCAAAGAATTCCATTCAAGTTGCATGGTCTTCCAGTTTCATCAATTTT TCATCCAACGCGTTCGATCTTCTTCATTTCAACAAAGAAGAATGTTCGAGTATATGACTT ATTGAAGCAGAAGCTCGTTAAGAAGCTTGAGACTGGGCTCCGTGAGGTGTCTTCAATTGC AGTTCATCCTGCTGGTGATAATGTAATTGTTGGGAGCAGAGAGGGAAAGTTGTGTTGGTT TGACATGGACCTTTCATCTCAACCTTACAGGATTCTCAAGTGTCACCCTAAAGACATTAC CAATGTGGCTTTCCATCATTCATACCCTCTCTTTGCAACATGCTCTGATGATTGTACTGC ATATGTTTTTCATGGCATGGTTTACTCTGATCTTAATCAGAATCCTCTTATTGTTCCCTT GGAAATTCTTAGAGGGCATTCCAGCACAAATGGAAGAGGTTAG