Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0226g00100.t01
CDS Infomation

cds chromosome:12X:Un:14870016:14873851:-1 gene:VIT_00s0226g00100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGCTTCCCACATCGGACGAAATTGCTTTTGTCCCTATTCTCCATTCTCACACTTTCA
GTCTTAAACTTCACACAAATTTCAGGTTTATCAGGAAGACAATTGCTTCAAACAGAGAAT
GTCTCAGAACCCATTAGACACTCAGATGACACAGTAAGGGTGGACCCTTTAGACCATTTC
AACAAGTACAGAGGAGGCTACGACATCACAAACAAGCATTACTGGAGTTCAACCATATTT
ACGGGCGTTCCGGGGTATGCCATTGGAGTTGTGTGGCTTCTGTGTGGTGTTGGATATGGA
GGATTTCTGCTGGTAACCACCATCTGGTGTAAAAGGGACAAGAGAAAGCTGAAGAAGAAG
AGATCACCCTGCTACAAGCAGTGTTACCTATGGCATATCCTCCTGGCTTCATTCTTCACA
ATTCTGGCAATAGTGGCGTCCGGATTGGTTCTTGGAGGGAATGCAAAATTCCATTCCAGA
GCTCGAACGGTGGTGGATATCATCATGGAAACAGCGAATAAGGCATCGGGAACCATCTAT
AACACAACAGGGGCAATGAGAAACATAAGACAGAATTTAGAAACAACTGATGTAGGTGCT
GAAGCTTCTAACTTCCTCACCTCCACATCAGATAAACTCGATGTTGAAGCTGCAGGTATA
GAGAGACAAGCTAGGAAGAATAGGCGGTTGATTGACAAGGGCCTGAAGATAGTGTATATA
ATAACTACTGTGACCATTTCCTTGAACCTGGTTGCTGTCATTGCCCTCTCAGTTTCTGGG
TTTCTGAAGTTCAGGAGGGCACTCTACTGGCTCATTGTGTTCTGCTGGTTCCTAACATTT
CTGTGCTGGTTGTTCTTTGGGATATATTTTTTCCTGGAAAATTTCTCGAGTGACACATGC
ACAGCTCTTGAAGATTTCCAACAAAATCCATACAACAACAGTCTGAGCTCGATCCTTCCA
TGCGATGAATTGCTTTCTGCAAAATCAGTCCTGTCAAACGTTAGTGCAGGAATATACGAT
CTTGTAAATGAGGTGAATACAAACATATCATCCCTACAGCAAACATCGTCTCTAAACCTC
GCTCATGTCTGCAATCCTTTCTCAGCACCACCAGAGTACCAATACCAGGCCGGAAACTGT
CCAGCTAATACAATTCCAATAGGCGAAATTCCTCAGGTATTGAAGGTATTTACTTGTTCT
GACACCGACAATGGGACATGCAACAATGGAGAATTCATCTCCACTAGCCACTTTAAAACA
GTGGAAGCTTACACAACTGCAATCCAGAGCCTACTGAATGCATACCCAGGTATGGAAGAT
CTCATAGAATGTCAGACAGTTAAGGATGCTTTTTCAGAGATCCTTATTAAACACTGTAAA
CCATTGAAGAGATACATTCGGATGGTTTGGGTTGCAATGGTTTTTTTGTCAGTAATTATG
GGAGTTTTGGTTCTGGTCTGGACGACACAAGCTCATCATGAGCAAAACTATCATTCCTCA
GATGGATCAGTGAAACCCCACATTCAAGTAGCAAATATGCTGGACTCTGGACCAGCTAAA
GCAAGTAACAGTAGCTCAGAAAATACTTCAGTCTAA

Peptide Sequence

PEP ID

VIT_00s0226g00100.t01
PEP Infomation

pep chromosome:12X:Un:14870016:14873851:-1 gene:VIT_00s0226g00100 transcript:VIT_00s0226g00100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGFPHRTKLLLSLFSILTLSVLNFTQISGLSGRQLLQTENVSEPIRHSDDTVRVDPLDHF
NKYRGGYDITNKHYWSSTIFTGVPGYAIGVVWLLCGVGYGGFLLVTTIWCKRDKRKLKKK
RSPCYKQCYLWHILLASFFTILAIVASGLVLGGNAKFHSRARTVVDIIMETANKASGTIY
NTTGAMRNIRQNLETTDVGAEASNFLTSTSDKLDVEAAGIERQARKNRRLIDKGLKIVYI
ITTVTISLNLVAVIALSVSGFLKFRRALYWLIVFCWFLTFLCWLFFGIYFFLENFSSDTC
TALEDFQQNPYNNSLSSILPCDELLSAKSVLSNVSAGIYDLVNEVNTNISSLQQTSSLNL
AHVCNPFSAPPEYQYQAGNCPANTIPIGEIPQVLKVFTCSDTDNGTCNNGEFISTSHFKT
VEAYTTAIQSLLNAYPGMEDLIECQTVKDAFSEILIKHCKPLKRYIRMVWVAMVFLSVIM
GVLVLVWTTQAHHEQNYHSSDGSVKPHIQVANMLDSGPAKASNSSSENTSV

Transcript Sequence

Transcript ID

VIT_00s0226g00100.t01
Transcript Infomation

cdna chromosome:12X:Un:14870016:14873851:-1 gene:VIT_00s0226g00100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTTGCAGTTGAGGATGTTGACTGCTGTTTTAGGTTTGATTAATAATATATATGTATGTTT
GGCTTTTGGATTTGAAGAGTATTCTTGGGTTTCTTTGGGTTTCTGCATTAGTTTTTGGGA
GTTGACAGAGAGAAGAGAAGAGAGGTGTTGAAATGGGTGCCGCTGTTCATTTGGGAGTTA
TGAAGATTAGTTTCAGCTTGATTGTTCAGACAAATACTGTTTCATCATGTTTAAGTTGAT
TCATTGTAAGACCATTTTGCAGTTTGAGGAAGCTCTTCATCATCTCCTCTCTTCTGTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTTTCTCTCTCTCTCTCTCTCCGTATACATAAAGATGGGCTTCCCACATCGGACG
AAATTGCTTTTGTCCCTATTCTCCATTCTCACACTTTCAGTCTTAAACTTCACACAAATT
TCAGGTTTATCAGGAAGACAATTGCTTCAAACAGAGAATGTCTCAGAACCCATTAGACAC
TCAGATGACACAGTAAGGGTGGACCCTTTAGACCATTTCAACAAGTACAGAGGAGGCTAC
GACATCACAAACAAGCATTACTGGAGTTCAACCATATTTACGGGCGTTCCGGGGTATGCC
ATTGGAGTTGTGTGGCTTCTGTGTGGTGTTGGATATGGAGGATTTCTGCTGGTAACCACC
ATCTGGTGTAAAAGGGACAAGAGAAAGCTGAAGAAGAAGAGATCACCCTGCTACAAGCAG
TGTTACCTATGGCATATCCTCCTGGCTTCATTCTTCACAATTCTGGCAATAGTGGCGTCC
GGATTGGTTCTTGGAGGGAATGCAAAATTCCATTCCAGAGCTCGAACGGTGGTGGATATC
ATCATGGAAACAGCGAATAAGGCATCGGGAACCATCTATAACACAACAGGGGCAATGAGA
AACATAAGACAGAATTTAGAAACAACTGATGTAGGTGCTGAAGCTTCTAACTTCCTCACC
TCCACATCAGATAAACTCGATGTTGAAGCTGCAGGTATAGAGAGACAAGCTAGGAAGAAT
AGGCGGTTGATTGACAAGGGCCTGAAGATAGTGTATATAATAACTACTGTGACCATTTCC
TTGAACCTGGTTGCTGTCATTGCCCTCTCAGTTTCTGGGTTTCTGAAGTTCAGGAGGGCA
CTCTACTGGCTCATTGTGTTCTGCTGGTTCCTAACATTTCTGTGCTGGTTGTTCTTTGGG
ATATATTTTTTCCTGGAAAATTTCTCGAGTGACACATGCACAGCTCTTGAAGATTTCCAA
CAAAATCCATACAACAACAGTCTGAGCTCGATCCTTCCATGCGATGAATTGCTTTCTGCA
AAATCAGTCCTGTCAAACGTTAGTGCAGGAATATACGATCTTGTAAATGAGGTGAATACA
AACATATCATCCCTACAGCAAACATCGTCTCTAAACCTCGCTCATGTCTGCAATCCTTTC
TCAGCACCACCAGAGTACCAATACCAGGCCGGAAACTGTCCAGCTAATACAATTCCAATA
GGCGAAATTCCTCAGGTATTGAAGGTATTTACTTGTTCTGACACCGACAATGGGACATGC
AACAATGGAGAATTCATCTCCACTAGCCACTTTAAAACAGTGGAAGCTTACACAACTGCA
ATCCAGAGCCTACTGAATGCATACCCAGGTATGGAAGATCTCATAGAATGTCAGACAGTT
AAGGATGCTTTTTCAGAGATCCTTATTAAACACTGTAAACCATTGAAGAGATACATTCGG
ATGGTTTGGGTTGCAATGGTTTTTTTGTCAGTAATTATGGGAGTTTTGGTTCTGGTCTGG
ACGACACAAGCTCATCATGAGCAAAACTATCATTCCTCAGATGGATCAGTGAAACCCCAC
ATTCAAGTAGCAAATATGCTGGACTCTGGACCAGCTAAAGCAAGTAACAGTAGCTCAGAA
AATACTTCAGTCTAA