Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0225g00230.t01
CDS Infomation

cds chromosome:12X:Un:14754484:14758787:-1 gene:VIT_00s0225g00230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACGACAATGACCATGAAGGTGGCTAGAGAAGAGCCGGCGGTGTCTCACACTAGCAGA
TATGCATTGCCAACTGAGCCTAAAGACAATGGCACAAGGTCCAATCTCTGCTCCGGTCCT
CTTATCCTTCTCTCACATGGGGATCCAACGGGGTTCAAGCCTTTCTGGCGAAGCGTGGGT
GACAAATGTAAGGTGACGATCGACAGCTGCGATTTTATGAGTTACCTGACTGATGTTGGA
AAAGTGTGCTGGTTTCTAGAGAAAGAACTGGAGGAGGCAATTAGACAATTACATCGTACG
GTTGGGAATGCAGCAACGGACGATCGGTATATCGTGGTGGGGACAGGTTCGACTCAGCTC
TTTCAGGCCACGCTCTACGCTCTTACCTCTCCCGGGGGGCCTGAGTCCGTGAATGTTGTT
TCTGCAGTTCCATACTATTCGTCATACCCAGAAGAGACTAACTTCTTGCGCTCAGCTCTG
TACAAATGGGCTGGTGATGCATACACATTTGATAAGGAAGGACCTTACCTAGAGCTGGTC
ACCATGCCCAACAATCCAGATGGTCAAGTTCGAGGCCCCGTGGTGAACCGAAATGACGGC
AAGCTCATTCATGATCTTGCCTATTATTGGCCACAATATACACCTATTACTGCTCAGGCC
GACTATGATATTATGCTGTTTACATTTTCCAAAAGTACGGGACATGGAGGGTCTCGAATT
GGGTGGGCTGTGGTGAAGGATGAGGACGTGGCTATAAAGATGACTAAATACATTGAGCTT
AACTCAATTGGTGTATCAAGAGAATCTCAGCATCGTGCTGCTAAAATACTCGGCGCGGTA
TCTGATAGCAGCCAATGCATTGGGGCCAACTTCTTCCAATATGGCAAAAGCCTCATGGCT
GAAAGATGGACAAAGTTCAGAGAGGTTATCAGTCGTAGCAGACTCTTCAGTCTGCCAAAG
TATATGGAAGAGTATTGCCAATTCAGCGGTGAAGACACTGAACCACATCCTGCCTTTGCA
TGGTTGAAGTGCAACAATGACATTGAGGACTTGGAGATTTTTCTCAGACGATATAAGATT
ATGGGGAGAGGTGGGAGACTATTTGGTTCTGATCCAAAGCTTGTTAGAGTCAGTATGTTG
GGCGATGAAGAGACGTTCAACCTCTTCTTGGAGAGGTTATCATCTATTCAAGATACTATT
GGTAATGGTAATGGAAATGGAAATTACATCTGA

Peptide Sequence

PEP ID

VIT_00s0225g00230.t01
PEP Infomation

pep chromosome:12X:Un:14754484:14758787:-1 gene:VIT_00s0225g00230 transcript:VIT_00s0225g00230.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTTMTMKVAREEPAVSHTSRYALPTEPKDNGTRSNLCSGPLILLSHGDPTGFKPFWRSVG
DKCKVTIDSCDFMSYLTDVGKVCWFLEKELEEAIRQLHRTVGNAATDDRYIVVGTGSTQL
FQATLYALTSPGGPESVNVVSAVPYYSSYPEETNFLRSALYKWAGDAYTFDKEGPYLELV
TMPNNPDGQVRGPVVNRNDGKLIHDLAYYWPQYTPITAQADYDIMLFTFSKSTGHGGSRI
GWAVVKDEDVAIKMTKYIELNSIGVSRESQHRAAKILGAVSDSSQCIGANFFQYGKSLMA
ERWTKFREVISRSRLFSLPKYMEEYCQFSGEDTEPHPAFAWLKCNNDIEDLEIFLRRYKI
MGRGGRLFGSDPKLVRVSMLGDEETFNLFLERLSSIQDTIGNGNGNGNYI

Transcript Sequence

Transcript ID

VIT_00s0225g00230.t01
Transcript Infomation

cdna chromosome:12X:Un:14754484:14758787:-1 gene:VIT_00s0225g00230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TAACTTAACTTGCCTTTCATTTCCAATATCTCAAAAAAGATTCAAAGTATTGAATTTTAG
GTTGTTTGAAGACTACATCCCTTCAATGATACTAAGGTGTATTTGCTTCCAATTGTTGAA
ACAATGGGAGATTGCTGCATCACAGACGTAGATCAAGTTGTAGGTTCTGAAGATTAAGTC
TTTAAAGTAAAACAATCAGAAATAAGTACACATCTACTCTCACATTGACAGCAAACTTAA
AACAGAGAAACAGAGAAACAGAGAAGATGACGACAATGACCATGAAGGTGGCTAGAGAAG
AGCCGGCGGTGTCTCACACTAGCAGATATGCATTGCCAACTGAGCCTAAAGACAATGGCA
CAAGGTCCAATCTCTGCTCCGGTCCTCTTATCCTTCTCTCACATGGGGATCCAACGGGGT
TCAAGCCTTTCTGGCGAAGCGTGGGTGACAAATGTAAGGTGACGATCGACAGCTGCGATT
TTATGAGTTACCTGACTGATGTTGGAAAAGTGTGCTGGTTTCTAGAGAAAGAACTGGAGG
AGGCAATTAGACAATTACATCGTACGGTTGGGAATGCAGCAACGGACGATCGGTATATCG
TGGTGGGGACAGGTTCGACTCAGCTCTTTCAGGCCACGCTCTACGCTCTTACCTCTCCCG
GGGGGCCTGAGTCCGTGAATGTTGTTTCTGCAGTTCCATACTATTCGTCATACCCAGAAG
AGACTAACTTCTTGCGCTCAGCTCTGTACAAATGGGCTGGTGATGCATACACATTTGATA
AGGAAGGACCTTACCTAGAGCTGGTCACCATGCCCAACAATCCAGATGGTCAAGTTCGAG
GCCCCGTGGTGAACCGAAATGACGGCAAGCTCATTCATGATCTTGCCTATTATTGGCCAC
AATATACACCTATTACTGCTCAGGCCGACTATGATATTATGCTGTTTACATTTTCCAAAA
GTACGGGACATGGAGGGTCTCGAATTGGGTGGGCTGTGGTGAAGGATGAGGACGTGGCTA
TAAAGATGACTAAATACATTGAGCTTAACTCAATTGGTGTATCAAGAGAATCTCAGCATC
GTGCTGCTAAAATACTCGGCGCGGTATCTGATAGCAGCCAATGCATTGGGGCCAACTTCT
TCCAATATGGCAAAAGCCTCATGGCTGAAAGATGGACAAAGTTCAGAGAGGTTATCAGTC
GTAGCAGACTCTTCAGTCTGCCAAAGTATATGGAAGAGTATTGCCAATTCAGCGGTGAAG
ACACTGAACCACATCCTGCCTTTGCATGGTTGAAGTGCAACAATGACATTGAGGACTTGG
AGATTTTTCTCAGACGATATAAGATTATGGGGAGAGGTGGGAGACTATTTGGTTCTGATC
CAAAGCTTGTTAGAGTCAGTATGTTGGGCGATGAAGAGACGTTCAACCTCTTCTTGGAGA
GGTTATCATCTATTCAAGATACTATTGGTAATGGTAATGGAAATGGAAATTACATCTGAT
GAATCGGAGAGGAAGCAAATAAGATGAATGTACTAGTTTATTTTGAAAGCTTTTTGAAGC
CAGCTGTTAAAGAAAATTGAGAGTAGCTGCAATATATTATCTAGATCCATCTAATGGGGT
TCG