Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0225g00100.t01
CDS Infomation

cds chromosome:12X:Un:14654524:14656344:-1 gene:VIT_00s0225g00100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGGAAACCAGAGAGAAGCTAATCGAAGAACAACTATCCGGTGCGATCCAGTTGGTG
GAGCGAGTTCGGGCGGCGGAGAGGGACGCCCACTCATACAAGTTCGAGTGCTCCGAGGTG
TGGAAGCAAGCCGGTCGTATCGGCGCAATGGTCCGGTCGGTTATCCGAATCGTCAGCTCG
ACTCCGTTTCTCTACGAGCGCCCGATTCGGTGTGTGGTGGCGGCGGTGTGTAGTACTCTG
GAGCGCGCCTTGGCACTGGTTCGCAAGTGTAAGCATCGGAGTGTTCTTCGCCGAGTCGTC
ACCATCATAAACGCGGCTGATTTTCGTAAAGTGTTTAGCCTGCTGGAAGCCTCTGTGGGG
GACATGAAATGGCTTCTCAACGTTGTGGACGCTGACGGAGGTAATGGGGTTGGTGGTATT
GGTGTTTCTATTGCCCCAATTGCAAGTAATGATCCGATTCTTTCTTGGGTTTGGTCCTAT
ATCGCCTCCGTTCAAATGGGGCAATTGCCATATCGAATTGAGGCCGCCAACTACCTGGTT
TCCATAGCACAGGATAATGATCGGAACAAGAGGATTATAGCGCAAGAAGGCGGCGTCCCT
CCGCTCTTGAAGCTCATGAAGGAGAGCGCATCACCAGACGCACAAATTGCGGCTACAACA
GCTCTTCTTCATTTAGCTGATGTTCAAGAGAGGGTTAGATTGATTGCTGATGAACTGGGG
GTTCCGATTATAGTGCATGTTCTTCGTAATTCGCCCATGAGGGTTCAGACAGCGGTGGCC
AATTTGGTAGCCAGGATGGCGGAGCTTGACCCCTTTTCTCAGGAGGAGTTTGCCAGGGAG
CATGTGGTTAGGCCGCTGGTGACATTGTTGTCTTTCGAGATAGTTATGAATGAAAATGAT
CCAAAGATGAGTATTCATTCTCTTGTTCAGATTAACAAAGAAGTGGGTGAAAGCTCAACA
GTTAACGCCAAACTTCATTTGAATTCATGTTCTTCGATGTATGGGGAAGGTAGTGGTAGA
GGTGGGCGTCATAACAAAGACAGGGAGAATGAGAAGCCTGAAGTGAAGATCAACTTGAAA
ACAAGCTGTGCAGAGGCTTTACGGATGCTTGCAAGAGGGAATGTGTCCAATAGCAAAAGG
ATAACAGAGACAAAGGGGCTGCTTTGTTTAGCCAAACTCATTGAGAAGGAAAAGGGAGAT
TTACAATTCAACTGCTTGATGACTATAATGGAGATAACTGCCATAGCTGAGTATAATGCT
GAACTTAGACGGGCAGTCTTCAAGATCAATTCTCCTGCTGCAAAAGCCGTTGTCAATCAA
CTTGTGAGGTTGATTGAAGAGGTCGACAGTACATTATTGCAAATTCCTGCCATAAGAGCT
CTTGGTTCACTGGCTCGAACCTTCAGTGCAAGGGAGACTCATGTCATCCGTGCCCTAGTG
GCACGACTTAGCCATTGGGACCATGATGTTGCAATGGAAGCTGCCATTGCCCTAGGGAAG
TTTGCTTGTCAAGAAAACTACCTTAATGCTGAGCATGCAGACTCAATTATCAAGTTTGGT
GGTGTTACACCTCTGATGAAACTAATGAGAGTAAATGAACAAACTCGGCTGCATGGACTG
ATCCTCCTCTGCCATCTTGCAATACATTCTGGCAATAGTGAGAGTTTGGAACAAGCAAGA
GTGTTGACCATTCTTGAAGGGGTGCAACATCCCATGATGGCTCAACATCCTGATTTAAGA
GAGTTGGTTTTACAAGCAACATTCCTCCTCAGGATGTACCACAATGGTGTCCTTGGTGAA
GGGCAGCCTTATGTGCCATGA

Peptide Sequence

PEP ID

VIT_00s0225g00100.t01
PEP Infomation

pep chromosome:12X:Un:14654524:14656344:-1 gene:VIT_00s0225g00100 transcript:VIT_00s0225g00100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MMETREKLIEEQLSGAIQLVERVRAAERDAHSYKFECSEVWKQAGRIGAMVRSVIRIVSS
TPFLYERPIRCVVAAVCSTLERALALVRKCKHRSVLRRVVTIINAADFRKVFSLLEASVG
DMKWLLNVVDADGGNGVGGIGVSIAPIASNDPILSWVWSYIASVQMGQLPYRIEAANYLV
SIAQDNDRNKRIIAQEGGVPPLLKLMKESASPDAQIAATTALLHLADVQERVRLIADELG
VPIIVHVLRNSPMRVQTAVANLVARMAELDPFSQEEFAREHVVRPLVTLLSFEIVMNEND
PKMSIHSLVQINKEVGESSTVNAKLHLNSCSSMYGEGSGRGGRHNKDRENEKPEVKINLK
TSCAEALRMLARGNVSNSKRITETKGLLCLAKLIEKEKGDLQFNCLMTIMEITAIAEYNA
ELRRAVFKINSPAAKAVVNQLVRLIEEVDSTLLQIPAIRALGSLARTFSARETHVIRALV
ARLSHWDHDVAMEAAIALGKFACQENYLNAEHADSIIKFGGVTPLMKLMRVNEQTRLHGL
ILLCHLAIHSGNSESLEQARVLTILEGVQHPMMAQHPDLRELVLQATFLLRMYHNGVLGE
GQPYVP

Transcript Sequence

Transcript ID

VIT_00s0225g00100.t01
Transcript Infomation

cdna chromosome:12X:Un:14654524:14656344:-1 gene:VIT_00s0225g00100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGGAAACCAGAGAGAAGCTAATCGAAGAACAACTATCCGGTGCGATCCAGTTGGTG
GAGCGAGTTCGGGCGGCGGAGAGGGACGCCCACTCATACAAGTTCGAGTGCTCCGAGGTG
TGGAAGCAAGCCGGTCGTATCGGCGCAATGGTCCGGTCGGTTATCCGAATCGTCAGCTCG
ACTCCGTTTCTCTACGAGCGCCCGATTCGGTGTGTGGTGGCGGCGGTGTGTAGTACTCTG
GAGCGCGCCTTGGCACTGGTTCGCAAGTGTAAGCATCGGAGTGTTCTTCGCCGAGTCGTC
ACCATCATAAACGCGGCTGATTTTCGTAAAGTGTTTAGCCTGCTGGAAGCCTCTGTGGGG
GACATGAAATGGCTTCTCAACGTTGTGGACGCTGACGGAGGTAATGGGGTTGGTGGTATT
GGTGTTTCTATTGCCCCAATTGCAAGTAATGATCCGATTCTTTCTTGGGTTTGGTCCTAT
ATCGCCTCCGTTCAAATGGGGCAATTGCCATATCGAATTGAGGCCGCCAACTACCTGGTT
TCCATAGCACAGGATAATGATCGGAACAAGAGGATTATAGCGCAAGAAGGCGGCGTCCCT
CCGCTCTTGAAGCTCATGAAGGAGAGCGCATCACCAGACGCACAAATTGCGGCTACAACA
GCTCTTCTTCATTTAGCTGATGTTCAAGAGAGGGTTAGATTGATTGCTGATGAACTGGGG
GTTCCGATTATAGTGCATGTTCTTCGTAATTCGCCCATGAGGGTTCAGACAGCGGTGGCC
AATTTGGTAGCCAGGATGGCGGAGCTTGACCCCTTTTCTCAGGAGGAGTTTGCCAGGGAG
CATGTGGTTAGGCCGCTGGTGACATTGTTGTCTTTCGAGATAGTTATGAATGAAAATGAT
CCAAAGATGAGTATTCATTCTCTTGTTCAGATTAACAAAGAAGTGGGTGAAAGCTCAACA
GTTAACGCCAAACTTCATTTGAATTCATGTTCTTCGATGTATGGGGAAGGTAGTGGTAGA
GGTGGGCGTCATAACAAAGACAGGGAGAATGAGAAGCCTGAAGTGAAGATCAACTTGAAA
ACAAGCTGTGCAGAGGCTTTACGGATGCTTGCAAGAGGGAATGTGTCCAATAGCAAAAGG
ATAACAGAGACAAAGGGGCTGCTTTGTTTAGCCAAACTCATTGAGAAGGAAAAGGGAGAT
TTACAATTCAACTGCTTGATGACTATAATGGAGATAACTGCCATAGCTGAGTATAATGCT
GAACTTAGACGGGCAGTCTTCAAGATCAATTCTCCTGCTGCAAAAGCCGTTGTCAATCAA
CTTGTGAGGTTGATTGAAGAGGTCGACAGTACATTATTGCAAATTCCTGCCATAAGAGCT
CTTGGTTCACTGGCTCGAACCTTCAGTGCAAGGGAGACTCATGTCATCCGTGCCCTAGTG
GCACGACTTAGCCATTGGGACCATGATGTTGCAATGGAAGCTGCCATTGCCCTAGGGAAG
TTTGCTTGTCAAGAAAACTACCTTAATGCTGAGCATGCAGACTCAATTATCAAGTTTGGT
GGTGTTACACCTCTGATGAAACTAATGAGAGTAAATGAACAAACTCGGCTGCATGGACTG
ATCCTCCTCTGCCATCTTGCAATACATTCTGGCAATAGTGAGAGTTTGGAACAAGCAAGA
GTGTTGACCATTCTTGAAGGGGTGCAACATCCCATGATGGCTCAACATCCTGATTTAAGA
GAGTTGGTTTTACAAGCAACATTCCTCCTCAGGATGTACCACAATGGTGTCCTTGGTGAA
GGGCAGCCTTATGTGCCATGA