Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0220g00110.t01
CDS Infomation

cds chromosome:12X:Un:14227586:14253295:1 gene:VIT_00s0220g00110 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGCTGTGGCAGCGTACCCAAATGGCTTCACCACTCTCAAGCATGATGCTCTGAGA
GTTGAATTGAATGGAGGGTCTTTGGGTTTTGGTGGGACATTGCGACAGGTGAGGCTAAAA
TCAGTGACGAGGTTTGAGGTGAAGAGACAGCTACAGGTCTGTGCTTCCGCTGAGAAAGCA
GTGTCTGCTCCTCCCATTCAACGCTCCAAGGTGAAACGCCACACGATTTCAGTATTTGTT
GGGGATGAGAGTGGAATTATAAACCGAATTGCAGGGGTTTTTGCTAGGAGGGGGTACAAC
ATTGAGTCCCTTGCTGTTGGCTTAAATGAGGACAAGGCTCTCTTTACTATAGTTGTCTCT
GGAACTGAAACAGTTTTGCGACAAGTTGTGGAGCAGCTTAACAAGCTTGTGAATGTTCTG
AAGGTGAAAGATCTCTCAAGGGAGCCACAGGTAGAGCGTGAATTGATGCTCATAAAACTT
AATGCAGATCCAAGTAAACGGGCAGAGATCATGTGGTTAGTAGACATCTTCAGAGCAAAA
ATTGTTGACATTTCAGAACATTCATTGACCATTGAGGTTACTGGAGATCCTGGAAAAATG
GTTGCTGTGCAGAGAAATTTAAGCAAGTTTGGAATTAAAGAACTTGCCAGAACTGGAAAG
ATTGCTCTGAGAAGGGAAAAGATGGGAGAAACAGCTCCCTTTTGGAGATTTTCTGCAGCT
TCTTATCCAGATCTTGAAGAGACAATTCCTGTTAATGCTCTTGTCAGGAATGTGAAGAGA
CCGCTTAATGGCAATCCCAGCACATCCCCAGGGGGTGATGTTTATCCAGTGGAGCCTTTC
AACGACTTTTCTGTTAATCCAGTTCTTGATCCTCACTGGGGTGCTCTGAATGATGAAGAT
TCAAGTGGGCTTCGATCACACACTTTATCTATGCTAGTGAACGATACTCCTGGCGTTCTC
AACATAGTTACTGGGGTTATATCTCGAAGAAGTTATAACATTCAGAGTCTAGCTGTGGGA
CCTGCTGAAATGGAGGGGCGTTCTCATATTACAACTGTTGTTCCTGGAACTGATGAGTCA
ATCAGTAAATTGGTTCAGCAACTTCAGAAGTTAATAGATCTCCATGAGGTTCGCGATATT
ACCCACATGCCATTTGCAGAACGAGAGTTGATGTTGATAAAGATTGCTGTAAACACTGCT
GCTAGGAGGGATGTTCTTGATATTGCTAGCATTTTCCGGGCCAAAGCTGTTGATGTGTCT
GATCACACAATTACCCTAGAGCTCACAGGAGATTTAAACAAGATGGTTGCACTGCAGAGG
TTATTGGAGCCCTATGGGATTTGTGAGGTGGCACGCACTGGGAGGGTGGCATTGGTGCGG
GAGTCAGGGGTGGATTCAACATATCTCCGTGGATATGCTCTTCCTCTGTAA

Peptide Sequence

PEP ID

VIT_00s0220g00110.t01
PEP Infomation

pep chromosome:12X:Un:14227586:14253295:1 gene:VIT_00s0220g00110 transcript:VIT_00s0220g00110.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAVAAYPNGFTTLKHDALRVELNGGSLGFGGTLRQVRLKSVTRFEVKRQLQVCASAEKA
VSAPPIQRSKVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNEDKALFTIVVS
GTETVLRQVVEQLNKLVNVLKVKDLSREPQVERELMLIKLNADPSKRAEIMWLVDIFRAK
IVDISEHSLTIEVTGDPGKMVAVQRNLSKFGIKELARTGKIALRREKMGETAPFWRFSAA
SYPDLEETIPVNALVRNVKRPLNGNPSTSPGGDVYPVEPFNDFSVNPVLDPHWGALNDED
SSGLRSHTLSMLVNDTPGVLNIVTGVISRRSYNIQSLAVGPAEMEGRSHITTVVPGTDES
ISKLVQQLQKLIDLHEVRDITHMPFAERELMLIKIAVNTAARRDVLDIASIFRAKAVDVS
DHTITLELTGDLNKMVALQRLLEPYGICEVARTGRVALVRESGVDSTYLRGYALPL

Transcript Sequence

Transcript ID

VIT_00s0220g00110.t01
Transcript Infomation

cdna chromosome:12X:Un:14227586:14253295:1 gene:VIT_00s0220g00110 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGCCACCTTTCATTGCTGGAGAACCAGTTTGGGGAGTGGGTGAACTGAGTGGAAATGGCG
GCTGTGGCAGCGTACCCAAATGGCTTCACCACTCTCAAGCATGATGCTCTGAGAGTTGAA
TTGAATGGAGGGTCTTTGGGTTTTGGTGGGACATTGCGACAGGTGAGGCTAAAATCAGTG
ACGAGGTTTGAGGTGAAGAGACAGCTACAGGTCTGTGCTTCCGCTGAGAAAGCAGTGTCT
GCTCCTCCCATTCAACGCTCCAAGGTGAAACGCCACACGATTTCAGTATTTGTTGGGGAT
GAGAGTGGAATTATAAACCGAATTGCAGGGGTTTTTGCTAGGAGGGGGTACAACATTGAG
TCCCTTGCTGTTGGCTTAAATGAGGACAAGGCTCTCTTTACTATAGTTGTCTCTGGAACT
GAAACAGTTTTGCGACAAGTTGTGGAGCAGCTTAACAAGCTTGTGAATGTTCTGAAGGTG
AAAGATCTCTCAAGGGAGCCACAGGTAGAGCGTGAATTGATGCTCATAAAACTTAATGCA
GATCCAAGTAAACGGGCAGAGATCATGTGGTTAGTAGACATCTTCAGAGCAAAAATTGTT
GACATTTCAGAACATTCATTGACCATTGAGGTTACTGGAGATCCTGGAAAAATGGTTGCT
GTGCAGAGAAATTTAAGCAAGTTTGGAATTAAAGAACTTGCCAGAACTGGAAAGATTGCT
CTGAGAAGGGAAAAGATGGGAGAAACAGCTCCCTTTTGGAGATTTTCTGCAGCTTCTTAT
CCAGATCTTGAAGAGACAATTCCTGTTAATGCTCTTGTCAGGAATGTGAAGAGACCGCTT
AATGGCAATCCCAGCACATCCCCAGGGGGTGATGTTTATCCAGTGGAGCCTTTCAACGAC
TTTTCTGTTAATCCAGTTCTTGATCCTCACTGGGGTGCTCTGAATGATGAAGATTCAAGT
GGGCTTCGATCACACACTTTATCTATGCTAGTGAACGATACTCCTGGCGTTCTCAACATA
GTTACTGGGGTTATATCTCGAAGAAGTTATAACATTCAGAGTCTAGCTGTGGGACCTGCT
GAAATGGAGGGGCGTTCTCATATTACAACTGTTGTTCCTGGAACTGATGAGTCAATCAGT
AAATTGGTTCAGCAACTTCAGAAGTTAATAGATCTCCATGAGGTTCGCGATATTACCCAC
ATGCCATTTGCAGAACGAGAGTTGATGTTGATAAAGATTGCTGTAAACACTGCTGCTAGG
AGGGATGTTCTTGATATTGCTAGCATTTTCCGGGCCAAAGCTGTTGATGTGTCTGATCAC
ACAATTACCCTAGAGCTCACAGGAGATTTAAACAAGATGGTTGCACTGCAGAGGTTATTG
GAGCCCTATGGGATTTGTGAGGTGGCACGCACTGGGAGGGTGGCATTGGTGCGGGAGTCA
GGGGTGGATTCAACATATCTCCGTGGATATGCTCTTCCTCTGTAACCCTGAATATCCTGA
ACAGCTTGTTCTGGGGGATTATCTGAAGTAGGTCATGTTTTTCTTTAATTGTTCAGCCTC
TTTTCCATTTTTTTTTGCATTGGACAAGGAAAAGAATTGAAGCCAAACTCAGTTTCTTAT
GTTTGTGTTAGGTTCCTCAAGAAGGGATCAGTGTTCATTTACTCAAATAGAGACCACGGT
CGCCAAAACTGGAAAACATGTTTTACTTAAATCATCCACTTACTGCTAACGGTCT