Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0218g00110.t01
CDS Infomation

cds chromosome:12X:Un:14030379:14035523:1 gene:VIT_00s0218g00110 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGTTTCCGCGTGTGTGGTTAGAACAAACCCATCCATCTCTCCATGTCTGAAAGCT
CCAAGGCCAAGCCTCAGTGGCAGAAAACAGTCCTGCTTGAGAGCTTGTGCCGCAAATACT
TCAGATGGTGAGGAAGGGAACAAGATGACCAGAAAAGAAAAGGACGGAGGGTGGAAGATA
GAATTCACCGGAGAAAAACCTCCCACACCACTACTAGACACAATCAATTATCCAGTCCAC
ATGAAAAACCTCTCCACCCAGGATCTTGAACAACTAGCAGCAGAGCTTAGAGCAGATATC
GTACAGAGTGTATCAAAAACAGGTGGGCATCTAAGCTCAAGCCTAGGAGTAGTGGAACTG
ACAGTGGCTCTTCATCATGTATTCAACACCCCCGAAGACAAGATCATATGGGATGTTGGC
CACCAGGCCTACCCGCACAAAATTTTGACAGGAAGGAGGTCTAGGATGCACACTATCAGG
AAAACCTCAGGTTTAGCAGGATTTCCCAAAAGGGAAGAGAGCGTCCATGATGCTTTCGGT
GTGGGACATAGTTCTACCAGCATCTCCGCTGGTCTTGGTATGGCAGTAGGAAGGGATCTT
CTAGGGAAGACCAACAGTGTTGTTGCAGTGATTGGGGATGGAGCCATGACTGCAGGGCAA
GCATATGAGGCAATGAACAATGCAGGGTACCTTGATACTAACATGATTATCATATTAAAT
GACAATAAGCAAGTCTCTTTGCCCACGGCTACTCTTGACGGTCCTGCAATTCCTGTTGGG
GCCCTTAGTAGAACTTTAACCAAGCTCCAATCAAGCACCAAGTTCCGCAAACTTCGTGAA
GCTGCAAAAAGCATCACGAAGCAGCTTGGAGGGCAAACATTCGAAGTTGCAGCCAAGGTA
GATGAGTATGCGAGGGGTCTGCTCAGCGCTAGCGGATCTACTCTGTTTGAGGAGCTAGGG
TTGTATTACATTGGTCCAGTGGATGGTCACAATGTTGACGATCTAGTAGGCATTTTTCAG
AAAGTAAAAGCAATGCCTGCACCAGGTCCAGTTCTGATCCACATTGTAACAGAGAAAGGG
AAGGGTTATCCTCCAGCCGAAGCAGCAGCTGATAGAATGCATGGGGTTGTCAAGTTCGAC
CCCAAGTCAGGCCAGCAATTTAAATCCAAATCCCCAACACTTCCATATACTCGGTACTTT
GCTGAATCTCTGATTGGAGAAGCCAAGGTAGATGACAAAATTGTAGCCATCCATGCTGCA
ATGGGTGGTGGGACTGGCCTCAATTATTTCCAGAAAAGGTTTCCTGATCGTTGCTTTGAT
GTGGGGATTGCTGAGCAACATGCTGTCACATTTGCAGCTGGTTTAGCCACAGAGGGTCTC
AAGCCATTCTGTGCCATCTACTCATCCTTCCTGCAGCGAGGATATGATCAGGTGATACAT
GATGTAGATCTTCAAAAGCTACCAGTCCGATTTGCTATGGATCGAGCTGGTCTGGTTGGT
GCAGATGGCCCTACTCATTGTGGAGCATTTGATATCACCTATATGGCTTGCTTGCCCAAC
ATGGTGGTCATGGCTCCATCTGATGAAGCAGAGCTTATGCACATGGTTGCCACAGCAGCA
GCCATTGATGACAGGCCTAGCTGCTTCAGGTTCCCGAGGGGAAATGGAATTGGAGCTGTT
CTTCCACCTGATAACAAAGGAACCCCACTTGAGATTGGAAAGGGAAGAATACTGGCAGAA
GGCCATAGGGTTGCTCTTCTGGGATATGGTTCTATAGTTCAGCAATGTGTTGAAGCTGCA
AGCATTCTTAGGTCCCAGAATATTTTTGTGACAGTAGTGGATGCGAGGTTTTGCAAACCT
TTGGATGGAGATCTCATCAGGAGATTGGCCAAAGAGCATGAAATCCTGATCACTGTGGAG
GAGGGTTCAATTGGAGGTTTTGGATCCCATGTGTCTCACTTCCTGTGCTTAAATGGTATA
ATGGATGGACCCCTAAAGTTGAGAGCAATGGTACTTCCTGATAGATACATTGACCATGGA
TCACCTGAAGATCAGATTCAAGAAGCAGGGCTCTCTTCCAAGCATATCTCAGCAACAGTG
CTATCTCTCTTGGGAAGGCAAAAAGAAGCTCTCACCCTCAACCGAATGCATATATGA

Peptide Sequence

PEP ID

VIT_00s0218g00110.t01
PEP Infomation

pep chromosome:12X:Un:14030379:14035523:1 gene:VIT_00s0218g00110 transcript:VIT_00s0218g00110.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAVSACVVRTNPSISPCLKAPRPSLSGRKQSCLRACAANTSDGEEGNKMTRKEKDGGWKI
EFTGEKPPTPLLDTINYPVHMKNLSTQDLEQLAAELRADIVQSVSKTGGHLSSSLGVVEL
TVALHHVFNTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKREESVHDAFG
VGHSSTSISAGLGMAVGRDLLGKTNSVVAVIGDGAMTAGQAYEAMNNAGYLDTNMIIILN
DNKQVSLPTATLDGPAIPVGALSRTLTKLQSSTKFRKLREAAKSITKQLGGQTFEVAAKV
DEYARGLLSASGSTLFEELGLYYIGPVDGHNVDDLVGIFQKVKAMPAPGPVLIHIVTEKG
KGYPPAEAAADRMHGVVKFDPKSGQQFKSKSPTLPYTRYFAESLIGEAKVDDKIVAIHAA
MGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVIH
DVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMVATAA
AIDDRPSCFRFPRGNGIGAVLPPDNKGTPLEIGKGRILAEGHRVALLGYGSIVQQCVEAA
SILRSQNIFVTVVDARFCKPLDGDLIRRLAKEHEILITVEEGSIGGFGSHVSHFLCLNGI
MDGPLKLRAMVLPDRYIDHGSPEDQIQEAGLSSKHISATVLSLLGRQKEALTLNRMHI

Transcript Sequence

Transcript ID

VIT_00s0218g00110.t01
Transcript Infomation

cdna chromosome:12X:Un:14030379:14035523:1 gene:VIT_00s0218g00110 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCAGCTATGGCGGTTTCCGCGTGTGTGGTTAGAACAAACCCATCCATCTCTCCATGTCTG
AAAGCTCCAAGGCCAAGCCTCAGTGGCAGAAAACAGTCCTGCTTGAGAGCTTGTGCCGCA
AATACTTCAGATGGTGAGGAAGGGAACAAGATGACCAGAAAAGAAAAGGACGGAGGGTGG
AAGATAGAATTCACCGGAGAAAAACCTCCCACACCACTACTAGACACAATCAATTATCCA
GTCCACATGAAAAACCTCTCCACCCAGGATCTTGAACAACTAGCAGCAGAGCTTAGAGCA
GATATCGTACAGAGTGTATCAAAAACAGGTGGGCATCTAAGCTCAAGCCTAGGAGTAGTG
GAACTGACAGTGGCTCTTCATCATGTATTCAACACCCCCGAAGACAAGATCATATGGGAT
GTTGGCCACCAGGCCTACCCGCACAAAATTTTGACAGGAAGGAGGTCTAGGATGCACACT
ATCAGGAAAACCTCAGGTTTAGCAGGATTTCCCAAAAGGGAAGAGAGCGTCCATGATGCT
TTCGGTGTGGGACATAGTTCTACCAGCATCTCCGCTGGTCTTGGTATGGCAGTAGGAAGG
GATCTTCTAGGGAAGACCAACAGTGTTGTTGCAGTGATTGGGGATGGAGCCATGACTGCA
GGGCAAGCATATGAGGCAATGAACAATGCAGGGTACCTTGATACTAACATGATTATCATA
TTAAATGACAATAAGCAAGTCTCTTTGCCCACGGCTACTCTTGACGGTCCTGCAATTCCT
GTTGGGGCCCTTAGTAGAACTTTAACCAAGCTCCAATCAAGCACCAAGTTCCGCAAACTT
CGTGAAGCTGCAAAAAGCATCACGAAGCAGCTTGGAGGGCAAACATTCGAAGTTGCAGCC
AAGGTAGATGAGTATGCGAGGGGTCTGCTCAGCGCTAGCGGATCTACTCTGTTTGAGGAG
CTAGGGTTGTATTACATTGGTCCAGTGGATGGTCACAATGTTGACGATCTAGTAGGCATT
TTTCAGAAAGTAAAAGCAATGCCTGCACCAGGTCCAGTTCTGATCCACATTGTAACAGAG
AAAGGGAAGGGTTATCCTCCAGCCGAAGCAGCAGCTGATAGAATGCATGGGGTTGTCAAG
TTCGACCCCAAGTCAGGCCAGCAATTTAAATCCAAATCCCCAACACTTCCATATACTCGG
TACTTTGCTGAATCTCTGATTGGAGAAGCCAAGGTAGATGACAAAATTGTAGCCATCCAT
GCTGCAATGGGTGGTGGGACTGGCCTCAATTATTTCCAGAAAAGGTTTCCTGATCGTTGC
TTTGATGTGGGGATTGCTGAGCAACATGCTGTCACATTTGCAGCTGGTTTAGCCACAGAG
GGTCTCAAGCCATTCTGTGCCATCTACTCATCCTTCCTGCAGCGAGGATATGATCAGGTG
ATACATGATGTAGATCTTCAAAAGCTACCAGTCCGATTTGCTATGGATCGAGCTGGTCTG
GTTGGTGCAGATGGCCCTACTCATTGTGGAGCATTTGATATCACCTATATGGCTTGCTTG
CCCAACATGGTGGTCATGGCTCCATCTGATGAAGCAGAGCTTATGCACATGGTTGCCACA
GCAGCAGCCATTGATGACAGGCCTAGCTGCTTCAGGTTCCCGAGGGGAAATGGAATTGGA
GCTGTTCTTCCACCTGATAACAAAGGAACCCCACTTGAGATTGGAAAGGGAAGAATACTG
GCAGAAGGCCATAGGGTTGCTCTTCTGGGATATGGTTCTATAGTTCAGCAATGTGTTGAA
GCTGCAAGCATTCTTAGGTCCCAGAATATTTTTGTGACAGTAGTGGATGCGAGGTTTTGC
AAACCTTTGGATGGAGATCTCATCAGGAGATTGGCCAAAGAGCATGAAATCCTGATCACT
GTGGAGGAGGGTTCAATTGGAGGTTTTGGATCCCATGTGTCTCACTTCCTGTGCTTAAAT
GGTATAATGGATGGACCCCTAAAGTTGAGAGCAATGGTACTTCCTGATAGATACATTGAC
CATGGATCACCTGAAGATCAGATTCAAGAAGCAGGGCTCTCTTCCAAGCATATCTCAGCA
ACAGTGCTATCTCTCTTGGGAAGGCAAAAAGAAGCTCTCACCCTCAACCGAATGCATATA
TGAAAAGCAAGACTCCATTCTACAAGTTTTGAAATCCATTCACTTCCTCAAAAGGTTTTG
TTCTAGTTTTTCAGGATGAGAAAAAATACCAAGATTCCGATCCAAAAGCTCATGCTTGGG
ATTCCAAAATACCAGG