Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0218g00030.t01
CDS Infomation

cds chromosome:12X:Un:13945269:13951159:-1 gene:VIT_00s0218g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGCAATGAAGACTAGGATGAGTAGCTTCTCTCGCAACACATCAGTTGCCCCTGCG
CCTCAGGCGCCGGGACTCAAGAGTGGACCCAATGGCACAATCTTTCTCTCATCGGGAATA
CCAGACCTTGACAAGATTTTAGGTGGTGGATTCCCTCTTGGAAGCCTTGTCATGGTGATG
GAGGACACAGAAGCGCCTCATCATATGCTTTTGTTGAGGAATTTCATGTCACAAGGACTG
GTTCACAACCAACCCCTTCTCTATGCCAGTCCATCAAAAGACCCAAGAGCTTTTTTGGGT
ACTTTGCCTAGCCCAGTATTATCTAAAGATGATAGATCTCATAACCGTGATCCTGAACAG
TTGCAGGAGAAGGGGTTGAGGATTGCTTGGCAGTACAAGAAGTATTTTGGTGAACATCGG
CCAAATTTTGATAGTCATAGAGATACCAAGCATGAGTACTGCAATGACTTTGACTTGCGA
AAGCCCTTGGAGAGATACTTTCTCACCGCGCAGAACATATGTTGTCTCAGCATTCAAGAT
CCTCCAAACCTTGCTGCTTTTAGAGACTGTTGTGCCAAATTTTTGGCTCAATTTTCAAGA
AACAACAGTAGCATTTCATGTGCTGGTCGTGTTGCCATTCAATCGTTCTGTGCTCCCCAA
TGTGAATATTCTAACATGGAATGGGATATGCTTTCCTTTATCAGATCTCTGAAAGGCATG
ATAAGAGATTCGAATGCAGTTGCTGTCATAACTTTTCCACCTTCCCTTCTATCACCTTCT
TCTTCCAAGAGGTGGCAACATATAGCTGATACGTTGCTTTCTGTTAAAGCAATCCCTGAT
GAGGACAAGGAGTTGGCAAATCTTCTCACTGGTTACCAGGACATGGTTGGGCTTCTCAAT
GTACATAAAGTGGCAAATGTTAATACACAGGTTCCTGTAATCCTAGAGGCTACTACATTC
TCGATAAAGTTACAAAAGAGGAGGTATTTGGTTTTAGAATGTCTAAATCAAGCCCCTGTT
GATGGTTCAAGTGGAAGTTCATATGCCTCTACTGGTAGCTGTTCTGGGTCCACCAAGACA
GGAACCCTTGACTTTTAG

Peptide Sequence

PEP ID

VIT_00s0218g00030.t01
PEP Infomation

pep chromosome:12X:Un:13945269:13951159:-1 gene:VIT_00s0218g00030 transcript:VIT_00s0218g00030.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAMKTRMSSFSRNTSVAPAPQAPGLKSGPNGTIFLSSGIPDLDKILGGGFPLGSLVMVM
EDTEAPHHMLLLRNFMSQGLVHNQPLLYASPSKDPRAFLGTLPSPVLSKDDRSHNRDPEQ
LQEKGLRIAWQYKKYFGEHRPNFDSHRDTKHEYCNDFDLRKPLERYFLTAQNICCLSIQD
PPNLAAFRDCCAKFLAQFSRNNSSISCAGRVAIQSFCAPQCEYSNMEWDMLSFIRSLKGM
IRDSNAVAVITFPPSLLSPSSSKRWQHIADTLLSVKAIPDEDKELANLLTGYQDMVGLLN
VHKVANVNTQVPVILEATTFSIKLQKRRYLVLECLNQAPVDGSSGSSYASTGSCSGSTKT
GTLDF

Transcript Sequence

Transcript ID

VIT_00s0218g00030.t01
Transcript Infomation

cdna chromosome:12X:Un:13945269:13951159:-1 gene:VIT_00s0218g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGCTGAGTTGATCGCACTTGCAGAGGCCATCGGTCGTATGAAGCTCTGAACTTCCTCAAC
TTGACAAAGCCCTGGTGAGTGCTGTTTTACCTTCAATATAGTGAACCCCTCCTCCTGCTT
GGTTGCTAAGAAAACGCAGGAAAACGGATAGGAAACTTTGAATTTTTCTTTCTGAAGAAA
AAGAAAGGAAAAAAACTCTCATCAACTAACCTAAGCCAAGATTGTGTTAGGCCTAGCTGA
AACAGATAAGTGGTAGAGAGCACTGCTGCAGCCATGGCTGCAATGAAGACTAGGATGAGT
AGCTTCTCTCGCAACACATCAGTTGCCCCTGCGCCTCAGGCGCCGGGACTCAAGAGTGGA
CCCAATGGCACAATCTTTCTCTCATCGGGAATACCAGACCTTGACAAGATTTTAGGTGGT
GGATTCCCTCTTGGAAGCCTTGTCATGGTGATGGAGGACACAGAAGCGCCTCATCATATG
CTTTTGTTGAGGAATTTCATGTCACAAGGACTGGTTCACAACCAACCCCTTCTCTATGCC
AGTCCATCAAAAGACCCAAGAGCTTTTTTGGGTACTTTGCCTAGCCCAGTATTATCTAAA
GATGATAGATCTCATAACCGTGATCCTGAACAGTTGCAGGAGAAGGGGTTGAGGATTGCT
TGGCAGTACAAGAAGTATTTTGGTGAACATCGGCCAAATTTTGATAGTCATAGAGATACC
AAGCATGAGTACTGCAATGACTTTGACTTGCGAAAGCCCTTGGAGAGATACTTTCTCACC
GCGCAGAACATATGTTGTCTCAGCATTCAAGATCCTCCAAACCTTGCTGCTTTTAGAGAC
TGTTGTGCCAAATTTTTGGCTCAATTTTCAAGAAACAACAGTAGCATTTCATGTGCTGGT
CGTGTTGCCATTCAATCGTTCTGTGCTCCCCAATGTGAATATTCTAACATGGAATGGGAT
ATGCTTTCCTTTATCAGATCTCTGAAAGGCATGATAAGAGATTCGAATGCAGTTGCTGTC
ATAACTTTTCCACCTTCCCTTCTATCACCTTCTTCTTCCAAGAGGTGGCAACATATAGCT
GATACGTTGCTTTCTGTTAAAGCAATCCCTGATGAGGACAAGGAGTTGGCAAATCTTCTC
ACTGGTTACCAGGACATGGTTGGGCTTCTCAATGTACATAAAGTGGCAAATGTTAATACA
CAGGTTCCTGTAATCCTAGAGGCTACTACATTCTCGATAAAGTTACAAAAGAGGAGGTAT
TTGGTTTTAGAATGTCTAAATCAAGCCCCTGTTGATGGTTCAAGTGGAAGTTCATATGCC
TCTACTGGTAGCTGTTCTGGGTCCACCAAGACAGGAACCCTTGACTTTTAGTCCCTAACT
TGATCCCTGAAAGAGAATCACTGCCTTCAGCTCATTAGAGTTAAGGGGATGCTCACTTGG
CTCAAAAGGAAAGCACTAATTATTTATGAAGTTAAAGAAAAATATTTTTTTGGCTGGTGG
AAGGCAGCTGATGTGATGTTAAGGAGGAAATTTAAAGACTTATTTTTTCTTTCTCTCTTT
CTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTCCCATTTCATTGAAATTGTATTTTG
GTATGAAAAACATGGATAGTAGGGATGAAATGTTGCTGGAATCTGAGGGAACTCCTCCAA
GTTGTAAGATAGTTTAGAAATATAAATTTGAGCATTTATGCATAGAAATGTTCATCTATT