Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0216g00070.t01
CDS Infomation

cds chromosome:12X:Un:13887653:13895324:1 gene:VIT_00s0216g00070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGGTATTGGGAGAATCATGGTGCTTCTGCAAAGGCGCTGGCAAGTCTGAGCGGATG
AAGGCCAACATTTTCACTGCCAAAGGCCCCGCCATGGCCACCATTTCCTCCTCCTCCTCC
GCCACCGGCTTCCTCATCCATCGCAACCTCCTCCTCACCACTCACGTCAACCTCCCCTCC
CTCGCCGCCGCCGAGGCCTCCGAGATCCGCCTCCAGGACGGCGTCCCCGCCACCCTCTTC
CCTCACAGGTTTTTCATCACCAGCTCTGTTCTTGATCTTACAATAGTTGGTTTAGATACT
GTGGATGGAGACTCGACTGCCCAGGGTCAGCAGCCTCACTACTTGAAGACCTGTTCTAAA
CCAAATCTGGATCTGGGCAGTGTAGTTTACCTCTTGGGTTACACAGAGAAAAAGGAATTA
ACAGTTGGTGAAGGAAAAGTAGTGATTGCCACTGACAATCTCATAAAAATGTCAACTGAT
GGAGTAACTTGGAGTCCTGGGTCTGCTGGTTTCGATGCACAAGGCAATCTCGCATTCATG
ATTTGCGATCCTATGAAACTAGCTACATCGCCAATCACCAAATCCTCCTCAACTTCATCG
TCATCTTCATCATCATGGAAGAAAGATCTTCCCATGCAATTTGGCATCCCCATTCCCATC
ATCTGTGATTGGTTAAACCAGCATTGGGAGGGTAGTCTTGACGAACTCAACAAACCCAAG
TTACCACTTATTCGATTGATGTCCACTGGTCAGAAGAGTGAGCCTTCTTGTACTTCCTTC
ACCATGCGGCGAGTCTTCAAATCAACTGATGCAGACAATGATGGAACCCCATCATCATCA
AATATAATCTCAAAAACTAGAGATCAACGTGGGCCTGCTACCTGTTCCACTGCAGCAAAC
ACATTTGAAGAGGTGGTCCATACAACTGATCCCCATGCTACCCATCTGCAGGGAATCCCA
ACTCCTGAAATATATGAATCACCAAAGTTGACTGCAATCCCTGTCCGGATGAAGGAAAGT
TCCCAAATCCAGCTTTTGGATATTAATTTTCCTCCACAGGTGGCCAAAGCTACTGTCCCA
CAGATTGCCAAACCGCTGCCATCAAACTCGGATGAGAATCATGTGAGGGGACTTTCTCTA
GACGATGGATTGCAAGAAAAGCAGTTTGAGAACAGAGATATGGCCAGGTCTGATGCAGAT
GCTGAGATTGCATCAACTGGTTCAGTAAATGTGGCCCATAGTGAGGTCCAGTCCAGTTCA
TCCCCCGTAGAGATCTCGGAGTTGCAGAATGGGTATAGCAGTGAAGGAGAGACCATGTAC
TCTGCAGAAACTGCTGAGAGCCGAAACTATACAAGTCCTAGGGAGGGAAGGTTTCAACAG
GTGGGAAGGAGTCAAAGCTGTGTGAGTTATAACAGATGGGGAACTGGGCAGAGGAATCCC
ATGACTCGCAGGGCATATCTAGAACAGCAGAGGAGCTTCATCCAAGGGAGAAAGATGCAT
TCACAAGGGGCAACTTCTCAAAGGAGTAATGATTACTTCGGCCCAACTGTCTCCTCAATC
ATGAAGAAGCGAAACAACAACTCGGAGCAGCCAAGCAAGCCCCGGCAAAGTGCAGTTCAT
TCTTCTCCACGATGGATGTTCTGA

Peptide Sequence

PEP ID

VIT_00s0216g00070.t01
PEP Infomation

pep chromosome:12X:Un:13887653:13895324:1 gene:VIT_00s0216g00070 transcript:VIT_00s0216g00070.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGVLGESWCFCKGAGKSERMKANIFTAKGPAMATISSSSSATGFLIHRNLLLTTHVNLPS
LAAAEASEIRLQDGVPATLFPHRFFITSSVLDLTIVGLDTVDGDSTAQGQQPHYLKTCSK
PNLDLGSVVYLLGYTEKKELTVGEGKVVIATDNLIKMSTDGVTWSPGSAGFDAQGNLAFM
ICDPMKLATSPITKSSSTSSSSSSSWKKDLPMQFGIPIPIICDWLNQHWEGSLDELNKPK
LPLIRLMSTGQKSEPSCTSFTMRRVFKSTDADNDGTPSSSNIISKTRDQRGPATCSTAAN
TFEEVVHTTDPHATHLQGIPTPEIYESPKLTAIPVRMKESSQIQLLDINFPPQVAKATVP
QIAKPLPSNSDENHVRGLSLDDGLQEKQFENRDMARSDADAEIASTGSVNVAHSEVQSSS
SPVEISELQNGYSSEGETMYSAETAESRNYTSPREGRFQQVGRSQSCVSYNRWGTGQRNP
MTRRAYLEQQRSFIQGRKMHSQGATSQRSNDYFGPTVSSIMKKRNNNSEQPSKPRQSAVH
SSPRWMF

Transcript Sequence

Transcript ID

VIT_00s0216g00070.t01
Transcript Infomation

cdna chromosome:12X:Un:13887653:13895324:1 gene:VIT_00s0216g00070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGACAATGGGGGTATTGGGAGAATCATGGTGCTTCTGCAAAGGCGCTGGCAAGTCTGAG
CGGATGAAGGCCAACATTTTCACTGCCAAAGGCCCCGCCATGGCCACCATTTCCTCCTCC
TCCTCCGCCACCGGCTTCCTCATCCATCGCAACCTCCTCCTCACCACTCACGTCAACCTC
CCCTCCCTCGCCGCCGCCGAGGCCTCCGAGATCCGCCTCCAGGACGGCGTCCCCGCCACC
CTCTTCCCTCACAGGTTTTTCATCACCAGCTCTGTTCTTGATCTTACAATAGTTGGTTTA
GATACTGTGGATGGAGACTCGACTGCCCAGGGTCAGCAGCCTCACTACTTGAAGACCTGT
TCTAAACCAAATCTGGATCTGGGCAGTGTAGTTTACCTCTTGGGTTACACAGAGAAAAAG
GAATTAACAGTTGGTGAAGGAAAAGTAGTGATTGCCACTGACAATCTCATAAAAATGTCA
ACTGATGGAGTAACTTGGAGTCCTGGGTCTGCTGGTTTCGATGCACAAGGCAATCTCGCA
TTCATGATTTGCGATCCTATGAAACTAGCTACATCGCCAATCACCAAATCCTCCTCAACT
TCATCGTCATCTTCATCATCATGGAAGAAAGATCTTCCCATGCAATTTGGCATCCCCATT
CCCATCATCTGTGATTGGTTAAACCAGCATTGGGAGGGTAGTCTTGACGAACTCAACAAA
CCCAAGTTACCACTTATTCGATTGATGTCCACTGGTCAGAAGAGTGAGCCTTCTTGTACT
TCCTTCACCATGCGGCGAGTCTTCAAATCAACTGATGCAGACAATGATGGAACCCCATCA
TCATCAAATATAATCTCAAAAACTAGAGATCAACGTGGGCCTGCTACCTGTTCCACTGCA
GCAAACACATTTGAAGAGGTGGTCCATACAACTGATCCCCATGCTACCCATCTGCAGGGA
ATCCCAACTCCTGAAATATATGAATCACCAAAGTTGACTGCAATCCCTGTCCGGATGAAG
GAAAGTTCCCAAATCCAGCTTTTGGATATTAATTTTCCTCCACAGGTGGCCAAAGCTACT
GTCCCACAGATTGCCAAACCGCTGCCATCAAACTCGGATGAGAATCATGTGAGGGGACTT
TCTCTAGACGATGGATTGCAAGAAAAGCAGTTTGAGAACAGAGATATGGCCAGGTCTGAT
GCAGATGCTGAGATTGCATCAACTGGTTCAGTAAATGTGGCCCATAGTGAGGTCCAGTCC
AGTTCATCCCCCGTAGAGATCTCGGAGTTGCAGAATGGGTATAGCAGTGAAGGAGAGACC
ATGTACTCTGCAGAAACTGCTGAGAGCCGAAACTATACAAGTCCTAGGGAGGGAAGGTTT
CAACAGGTGGGAAGGAGTCAAAGCTGTGTGAGTTATAACAGATGGGGAACTGGGCAGAGG
AATCCCATGACTCGCAGGGCATATCTAGAACAGCAGAGGAGCTTCATCCAAGGGAGAAAG
ATGCATTCACAAGGGGCAACTTCTCAAAGGAGTAATGATTACTTCGGCCCAACTGTCTCC
TCAATCATGAAGAAGCGAAACAACAACTCGGAGCAGCCAAGCAAGCCCCGGCAAAGTGCA
GTTCATTCTTCTCCACGATGGATGTTCTGATTAGAGACCAACAGTGACAACCTCGTGTAC
CTTTTTGGTGGCTTCAATTCATGCCCATTTGATTCCATATACCTATGCTGTAACTAATTT
ATTGACTACATATGCTATCTTAAGATTAATAAAGATGAAATCAGTCCAA