Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0216g00030.t01
CDS Infomation

cds chromosome:12X:Un:13801062:13806806:-1 gene:VIT_00s0216g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTCCCACTCGCAGATCCACGACAGCAGCGCCCAGTCCAAACCCTAGCGCTCGCAAAA
GGGAGGAGTGAGAAGCAAGGTTTCTGTCACCTCACTCCTCCACCACAACAACCCAGCCAA
GGCCTCAGTCTCTATATTGTTTTGTTCGGTGTGATATCAGGTTTTAAGGAGATCCATCGA
TCAGAAATGGCGCAGCAAGCCCCAGCTGGATCAACCCATGCGGCCCAAGTTGTTGGGAAC
GCTTTTGTGCACCAATACTACCATATCCTGCATCAGTCCCCAGAGCTTGTTTTCCGGTTT
TATCAGGATATTAGTAAGCTTGGTCGTCTCGAGGAAAATGGGATCATGGGTGTTACCACA
ACAATGGAAGCAATCAATGAGAAGATACTCTCACTTAACTACGGGGACTTGATTGCCGAG
ATTAAGTCTGTGGATGCCCAAGAATCTTTTGGAGGGGGAGTCCTTGTCCTTGTAACTGGG
TATTTGACAGGGAAAGACAATAGGAGCCGAGATTTTACTCAGTCCTTCTTTCTTGCACCT
CAAGACAAAGGCTACTTTGTCTTGAATGACTTATTCAGATACATTGAAGATGTCAAATAC
CAGGATGGAAATCCAGGTCTGGTGAGTGAGGTGGAAGCTCCTCTTACTCCTGAACAAGAT
CCTTCTCCGGTGCAAGAGAATCATATTTTGGAACCGACACCAGAAGTGCCAGAGGAGGTT
AATGAGGAAGTCTATAACCCTAGTGAGAATGGGGAAGCTTCAGTTGAGGAAGAGGAAGCA
CCAGTGGCTGAGGTTGTTGATGAAATCCAGGATGATCAGATGGTGACCATATCTGATTCC
AAAATCTTAGAAGTGCCAAAGAAGTCATATGCTTCCATTGTGAAGGTAATGAAGGAAAGC
TCTGTGCCTTTCTCAAGTCCTACCCCTATCCCTCCGAGGCCTGTACCAAAGATTCAAGAG
CAGCAAGTGACAGTTGCACCATTGCCAACACCAGGAGCTGAGGCAAATGCTATTGAAAAT
GGGAATAACCAAGAGGGAGAAGCGGATGGTCATTCTATCTACATAAGGGGTTTGCCTTCA
AATGCCACACCTGCTTTACTTGAGGACGAATTCAAGAAGTTTGGACCTATTAAGAGTGGT
GGTGTTCAAGTTAGAAGCAACAAGCAAGGATTTTGCTTTGGCTTTGTGGAGTTCGAGGTG
GCAAGTGCCGTTCAAAGTGCAATGGAGGCTTCACCCATTACAATTGGTGGGCGTCAAGCT
TTTGTTGAGGAAAAGAGGTCTACAAACAGTTCTAGAGTGAACAACAGAACACGCTTTTCA
AATGGAAGGGGAGTTGTATTCAGGAATGAGGGAGGTAGAGGACGCGGAAACTATGGAGGT
AACAGAGGATATAACCGAGGTGATTTCAATAGCAGGAGCGAGTTTGGAAACAGGGGCAGT
CGGGGAGGATTTCCAAATCGTGGAGGTGATGGATATCAGAGGACCGATCATGTGGGGAGC
AATGGTGGCCGTGTGAACCGTGCTAGTGGCTTGACTGTTAATGCTGCAGCCAAAACTACA
GCACCAAGGGTATCTGCCTCTGCCTGA

Peptide Sequence

PEP ID

VIT_00s0216g00030.t01
PEP Infomation

pep chromosome:12X:Un:13801062:13806806:-1 gene:VIT_00s0216g00030 transcript:VIT_00s0216g00030.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MFPLADPRQQRPVQTLALAKGRSEKQGFCHLTPPPQQPSQGLSLYIVLFGVISGFKEIHR
SEMAQQAPAGSTHAAQVVGNAFVHQYYHILHQSPELVFRFYQDISKLGRLEENGIMGVTT
TMEAINEKILSLNYGDLIAEIKSVDAQESFGGGVLVLVTGYLTGKDNRSRDFTQSFFLAP
QDKGYFVLNDLFRYIEDVKYQDGNPGLVSEVEAPLTPEQDPSPVQENHILEPTPEVPEEV
NEEVYNPSENGEASVEEEEAPVAEVVDEIQDDQMVTISDSKILEVPKKSYASIVKVMKES
SVPFSSPTPIPPRPVPKIQEQQVTVAPLPTPGAEANAIENGNNQEGEADGHSIYIRGLPS
NATPALLEDEFKKFGPIKSGGVQVRSNKQGFCFGFVEFEVASAVQSAMEASPITIGGRQA
FVEEKRSTNSSRVNNRTRFSNGRGVVFRNEGGRGRGNYGGNRGYNRGDFNSRSEFGNRGS
RGGFPNRGGDGYQRTDHVGSNGGRVNRASGLTVNAAAKTTAPRVSASA

Transcript Sequence

Transcript ID

VIT_00s0216g00030.t01
Transcript Infomation

cdna chromosome:12X:Un:13801062:13806806:-1 gene:VIT_00s0216g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTCCCACTCGCAGATCCACGACAGCAGCGCCCAGTCCAAACCCTAGCGCTCGCAAAA
GGGAGGAGTGAGAAGCAAGGTTTCTGTCACCTCACTCCTCCACCACAACAACCCAGCCAA
GGCCTCAGTCTCTATATTGTTTTGTTCGGTGTGATATCAGGTTTTAAGGAGATCCATCGA
TCAGAAATGGCGCAGCAAGCCCCAGCTGGATCAACCCATGCGGCCCAAGTTGTTGGGAAC
GCTTTTGTGCACCAATACTACCATATCCTGCATCAGTCCCCAGAGCTTGTTTTCCGGTTT
TATCAGGATATTAGTAAGCTTGGTCGTCTCGAGGAAAATGGGATCATGGGTGTTACCACA
ACAATGGAAGCAATCAATGAGAAGATACTCTCACTTAACTACGGGGACTTGATTGCCGAG
ATTAAGTCTGTGGATGCCCAAGAATCTTTTGGAGGGGGAGTCCTTGTCCTTGTAACTGGG
TATTTGACAGGGAAAGACAATAGGAGCCGAGATTTTACTCAGTCCTTCTTTCTTGCACCT
CAAGACAAAGGCTACTTTGTCTTGAATGACTTATTCAGATACATTGAAGATGTCAAATAC
CAGGATGGAAATCCAGGTCTGGTGAGTGAGGTGGAAGCTCCTCTTACTCCTGAACAAGAT
CCTTCTCCGGTGCAAGAGAATCATATTTTGGAACCGACACCAGAAGTGCCAGAGGAGGTT
AATGAGGAAGTCTATAACCCTAGTGAGAATGGGGAAGCTTCAGTTGAGGAAGAGGAAGCA
CCAGTGGCTGAGGTTGTTGATGAAATCCAGGATGATCAGATGGTGACCATATCTGATTCC
AAAATCTTAGAAGTGCCAAAGAAGTCATATGCTTCCATTGTGAAGGTAATGAAGGAAAGC
TCTGTGCCTTTCTCAAGTCCTACCCCTATCCCTCCGAGGCCTGTACCAAAGATTCAAGAG
CAGCAAGTGACAGTTGCACCATTGCCAACACCAGGAGCTGAGGCAAATGCTATTGAAAAT
GGGAATAACCAAGAGGGAGAAGCGGATGGTCATTCTATCTACATAAGGGGTTTGCCTTCA
AATGCCACACCTGCTTTACTTGAGGACGAATTCAAGAAGTTTGGACCTATTAAGAGTGGT
GGTGTTCAAGTTAGAAGCAACAAGCAAGGATTTTGCTTTGGCTTTGTGGAGTTCGAGGTG
GCAAGTGCCGTTCAAAGTGCAATGGAGGCTTCACCCATTACAATTGGTGGGCGTCAAGCT
TTTGTTGAGGAAAAGAGGTCTACAAACAGTTCTAGAGTGAACAACAGAACACGCTTTTCA
AATGGAAGGGGAGTTGTATTCAGGAATGAGGGAGGTAGAGGACGCGGAAACTATGGAGGT
AACAGAGGATATAACCGAGGTGATTTCAATAGCAGGAGCGAGTTTGGAAACAGGGGCAGT
CGGGGAGGATTTCCAAATCGTGGAGGTGATGGATATCAGAGGACCGATCATGTGGGGAGC
AATGGTGGCCGTGTGAACCGTGCTAGTGGCTTGACTGTTAATGCTGCAGCCAAAACTACA
GCACCAAGGGTATCTGCCTCTGCCTGAAGAAGTTGGTTGAAAAGGAGGTTGGTGAGTTCT
GAAAGGAAATTAGGTTTCAGCACCTGCTGATCCTTTTTGTGGATGAGGCGTTCGGAAGTT
TCTTTACAATTTTCTCTAACCTTTTGTCCAATTTTTGCTCTCTATTTTGGGTGGTTATAG
TTGGATGTTGGATAATTTAATTAGTTTGTTGTCTAGTATACTAATGCCATCTGTAGTTCC
CTCAGAGGGGGTGGGGGTGGAGGGGTTGTCGTTTGTCATTTGTGGTTAGGTTGTATTCTT
AGCCCTGTTGTGAGGGCCTTTGTTAGTTAAATTTTTTTAGGGCTGTTGATCGTTGTGAAA
TGACGATATGGTTCTGGATATAGGTCATTTTTGTTCTTGGTTTTGCAGAAACAGCTTAAT
AGATGTTTTAATCAGTGCAGATGCTCCTGCTTGAGCAAAAGCCATTTAAATGTCAACATC
TATCAATGCCCTTCTCAGCAAATGGATGCCATGGGAAAATGCTGGGTCTGGAATAG