Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0215g00020.t01
CDS Infomation

cds chromosome:12X:Un:13508805:13524697:1 gene:VIT_00s0215g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTAGGTGCATCCCTGCGTTCAGTTGGGAGACTCTGCTCCGTACGTGCAATATGTAGA
GGCAGAGGCAGTGGCAGAGGCATAGGCCGTTTCTCCGCCTCTTCCACAAGCCTCATTTTC
CTTCCTCCTATTGCGACTACCGCCGCAGCGCCTACATCCCGCTTTAGCTCCTCTATTTCT
CATTACTCTGACAGTAATTATACTGATGATGGCGGTGAGACCCATGGCATTACCAATAGG
GAGACGAATGCTTATTCGGCGATTGAGCTGGCGCTCGACTCTGTGGTTAAGATCTTCACT
GTCTCCAGCAGCCCCAACTATTTGCTTCCTTGGCAGAACAAGTCCCAGCGCGAAACTATG
GGTTCCGGATTTGTCATCCCCGGGAAAAGGATTCTTACAAATGCTCATGTCGTGGCTGAT
CACACATTTGTGCTTGTAAGAAAGCACGGTTCTCCTACCAAGTATAGAGCAGAAATTCAA
GCTGTTGGCCATGAATGTGACTTGGCTATTCTAGTTGTTGAAAGTGAGGAATTCTGGGAG
GGTTTGAGTTTTTTGGAGCTCGGAGACATTCCATTTCTGCAAGAAGCTGTTGCTGTTGTT
GGATACCCCCAAGGTGGGGACAACATTTCTGTGACAAAAGGTGTTGTTTCCAGAGTTGAA
CCTACACAATATGTACATGGTGCTACCCAGCTCATGGCAATACAGATTGATGCAGCTATT
AATCCAGGGAATAGTGGAGGCCCTGCAATTATGGGCAATAGTGTTGCTGGGGTAGCTTTT
CAAAACCTTTCTGGTGCAGAGAATATTGGTTACATAATCCCTGTTCCTGTCATAAAGCAT
TTTATATCTGGCATTGAAGAAACTGGCAAATATGTTGGATTCTGCTCTCTGGGTTTGTCA
TGCCAGCCTACTGAAAATATTCAACTTCGAACCCACTTTCGAATGCACCCTGAAATGACT
GGGGTACTTGTGAGCAAAATCAATCCTCTTTCGGATGCACATAGAGTTCTGAAAAAGGAT
GATATCATCCTTGCATTTGATGGTGTGCCCATAGCAAATGATGGAACAGTTCCTTTCAGA
AACAGGGAGAGGATAACATTTGATCATCTAGTCTCCATGAAGAAACCCAATGAAACAGCT
CAAGTAAAAGTTCTGAGGGATGGTGAGGAGTATGAATTCAGTGTTACCCTCCAAACTTTG
CAGCCATTAGTTCCAGTTCAACAATTTGATAAGCTTCCTAGTTATTTCATTTTTGCTGGT
TTGGTCTTTGTTCCATTGACCCAGCCATACCTCCATGAGTATGGAGAAGACTGGTATAAT
ACTTGTCCTCGTCGACTGTGCGAACGTGCACTAAGGGAACTGCCCACAAGGCCTGGTGAA
CAAATTGTCATCCTTTCTCAGGTGCTGATGGATGATATCAATGCGGGGTATGAACGCCTT
GCAGACCTACAGGTGAAAAAGGTAAATGGTGTAGAAATCAAGAACCTGAAACACTTTTCC
CAGCTTGTGGAGAATTGTAGCATGGAGAGCTTGAGGTTTGATTTGGACGATGAGAGAGTA
ATTGTATTGAACTATCAATTGGCTAAAATAGCCACATCTAGAATTTTGAAGCGTCACAGA
ATACCATCTGCCATGTCCAGAGACCTCATTCAGAAGCAGGACTCCTCAGAAGCTGAGTTG
GCTTGCTTGAGCTGA

Peptide Sequence

PEP ID

VIT_00s0215g00020.t01
PEP Infomation

pep chromosome:12X:Un:13508805:13524697:1 gene:VIT_00s0215g00020 transcript:VIT_00s0215g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLGASLRSVGRLCSVRAICRGRGSGRGIGRFSASSTSLIFLPPIATTAAAPTSRFSSSIS
HYSDSNYTDDGGETHGITNRETNAYSAIELALDSVVKIFTVSSSPNYLLPWQNKSQRETM
GSGFVIPGKRILTNAHVVADHTFVLVRKHGSPTKYRAEIQAVGHECDLAILVVESEEFWE
GLSFLELGDIPFLQEAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAI
NPGNSGGPAIMGNSVAGVAFQNLSGAENIGYIIPVPVIKHFISGIEETGKYVGFCSLGLS
CQPTENIQLRTHFRMHPEMTGVLVSKINPLSDAHRVLKKDDIILAFDGVPIANDGTVPFR
NRERITFDHLVSMKKPNETAQVKVLRDGEEYEFSVTLQTLQPLVPVQQFDKLPSYFIFAG
LVFVPLTQPYLHEYGEDWYNTCPRRLCERALRELPTRPGEQIVILSQVLMDDINAGYERL
ADLQVKKVNGVEIKNLKHFSQLVENCSMESLRFDLDDERVIVLNYQLAKIATSRILKRHR
IPSAMSRDLIQKQDSSEAELACLS

Transcript Sequence

Transcript ID

VIT_00s0215g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:13508805:13524697:1 gene:VIT_00s0215g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTAGGTGCATCCCTGCGTTCAGTTGGGAGACTCTGCTCCGTACGTGCAATATGTAGA
GGCAGAGGCAGTGGCAGAGGCATAGGCCGTTTCTCCGCCTCTTCCACAAGCCTCATTTTC
CTTCCTCCTATTGCGACTACCGCCGCAGCGCCTACATCCCGCTTTAGCTCCTCTATTTCT
CATTACTCTGACAGTAATTATACTGATGATGGCGGTGAGACCCATGGCATTACCAATAGG
GAGACGAATGCTTATTCGGCGATTGAGCTGGCGCTCGACTCTGTGGTTAAGATCTTCACT
GTCTCCAGCAGCCCCAACTATTTGCTTCCTTGGCAGAACAAGTCCCAGCGCGAAACTATG
GGTTCCGGATTTGTCATCCCCGGGAAAAGGATTCTTACAAATGCTCATGTCGTGGCTGAT
CACACATTTGTGCTTGTAAGAAAGCACGGTTCTCCTACCAAGTATAGAGCAGAAATTCAA
GCTGTTGGCCATGAATGTGACTTGGCTATTCTAGTTGTTGAAAGTGAGGAATTCTGGGAG
GGTTTGAGTTTTTTGGAGCTCGGAGACATTCCATTTCTGCAAGAAGCTGTTGCTGTTGTT
GGATACCCCCAAGGTGGGGACAACATTTCTGTGACAAAAGGTGTTGTTTCCAGAGTTGAA
CCTACACAATATGTACATGGTGCTACCCAGCTCATGGCAATACAGATTGATGCAGCTATT
AATCCAGGGAATAGTGGAGGCCCTGCAATTATGGGCAATAGTGTTGCTGGGGTAGCTTTT
CAAAACCTTTCTGGTGCAGAGAATATTGGTTACATAATCCCTGTTCCTGTCATAAAGCAT
TTTATATCTGGCATTGAAGAAACTGGCAAATATGTTGGATTCTGCTCTCTGGGTTTGTCA
TGCCAGCCTACTGAAAATATTCAACTTCGAACCCACTTTCGAATGCACCCTGAAATGACT
GGGGTACTTGTGAGCAAAATCAATCCTCTTTCGGATGCACATAGAGTTCTGAAAAAGGAT
GATATCATCCTTGCATTTGATGGTGTGCCCATAGCAAATGATGGAACAGTTCCTTTCAGA
AACAGGGAGAGGATAACATTTGATCATCTAGTCTCCATGAAGAAACCCAATGAAACAGCT
CAAGTAAAAGTTCTGAGGGATGGTGAGGAGTATGAATTCAGTGTTACCCTCCAAACTTTG
CAGCCATTAGTTCCAGTTCAACAATTTGATAAGCTTCCTAGTTATTTCATTTTTGCTGGT
TTGGTCTTTGTTCCATTGACCCAGCCATACCTCCATGAGTATGGAGAAGACTGGTATAAT
ACTTGTCCTCGTCGACTGTGCGAACGTGCACTAAGGGAACTGCCCACAAGGCCTGGTGAA
CAAATTGTCATCCTTTCTCAGGTGCTGATGGATGATATCAATGCGGGGTATGAACGCCTT
GCAGACCTACAGGTGAAAAAGGTAAATGGTGTAGAAATCAAGAACCTGAAACACTTTTCC
CAGCTTGTGGAGAATTGTAGCATGGAGAGCTTGAGGTTTGATTTGGACGATGAGAGAGTA
ATTGTATTGAACTATCAATTGGCTAAAATAGCCACATCTAGAATTTTGAAGCGTCACAGA
ATACCATCTGCCATGTCCAGAGACCTCATTCAGAAGCAGGACTCCTCAGAAGCTGAGTTG
GCTTGCTTGAGCTGAGTTCTCGTCGGGAAACTTTCTTTTGTAA