Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0214g00090.t01
CDS Infomation

cds chromosome:12X:Un:13372259:13375717:1 gene:VIT_00s0214g00090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAAGCAAGTATCCCGAGTCCGACGCCCGCACTGTTTTCTCGGCTCTGCCGGAGGGT
GCCATCGTCGATATTTTGAAGCTAACGACTCCTCGGGACGCCTGTAGACTGTCAGCGGTG
GCATCAGTGTTTTCGTCGGCGGCGGAGTCGGACTCTTTGTGGGAGAGTTTCCTGCCGCCC
GATTATCTGGAGATCGTCAGCCGGTCGTCGGAGTCTCCGTCTCGACGTGATTTCTCCACC
AAGAAGGAGCTCTTCTTCAGTCTCTGCGATTCTCCTCTGTTGATCGATGGGGGCAGAAGG
GGCTTTTGGTTGGAGAAGCAAAGTGGAAAAAAATGTTACATGTTAGCAGCAAGAGAACTC
AGTATTACATGGGGTGATACTCCTGAGTATTGGACATGGACTTCTATACCAGAGTCTCGA
TTTTCTGAGGTCGCATTTCTTAATGAAGTTTGTTGGTTTGAAGTTAAAGGTAAAATAGAT
ACTGACATGTTGTCTTTGAGAACAAAGTATGCAGCTTACCTTGTGTTTGATAGGAGAGAT
TCGTATGGATTTGAAAATGTCGAGGTGAAATCATCAGTTGGAATTATTGGAAGTGAAGCC
ACTGAGAACATAATTTATTTAGACAAAGATGCAAGCGAAGAAGAAGATACGGAGGATGAA
CTTGTGAGTATTCAGAATGTAAGAAGCTGGATTAATGATACTCTGACTCAATTGTATTCA
TCACAAGAACCAGATAAAGAACTTGTAAGTTTTGAAGATGTGAGAACTTGGATGAACAAA
AATATATTTCAATTGCATTCCTCACATGAACCACAAGAACCTGGGGTTTCTACAAAAGGC
GATGGTCCATATCCAAATATGAGAAAAGATGCATGGGTTGAGATTGAATTGGGCGAGTTC
TTTAATGAAGGAGGAGGAAATAAGGAGTTAGAGATTGCCATCAAGCAGTTTGATGGTCAT
TGGAAACAAGGTCTTATTATTGAAGGGATCGAGATTAGACCAAAAAATGATTAG

Peptide Sequence

PEP ID

VIT_00s0214g00090.t01
PEP Infomation

pep chromosome:12X:Un:13372259:13375717:1 gene:VIT_00s0214g00090 transcript:VIT_00s0214g00090.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MESKYPESDARTVFSALPEGAIVDILKLTTPRDACRLSAVASVFSSAAESDSLWESFLPP
DYLEIVSRSSESPSRRDFSTKKELFFSLCDSPLLIDGGRRGFWLEKQSGKKCYMLAAREL
SITWGDTPEYWTWTSIPESRFSEVAFLNEVCWFEVKGKIDTDMLSLRTKYAAYLVFDRRD
SYGFENVEVKSSVGIIGSEATENIIYLDKDASEEEDTEDELVSIQNVRSWINDTLTQLYS
SQEPDKELVSFEDVRTWMNKNIFQLHSSHEPQEPGVSTKGDGPYPNMRKDAWVEIELGEF
FNEGGGNKELEIAIKQFDGHWKQGLIIEGIEIRPKND

Transcript Sequence

Transcript ID

VIT_00s0214g00090.t01
Transcript Infomation

cdna chromosome:12X:Un:13372259:13375717:1 gene:VIT_00s0214g00090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTGAGAATGGAAAGCAAGTATCCCGAGTCCGACGCCCGCACTGTTTTCTCGGCTCTGCCG
GAGGGTGCCATCGTCGATATTTTGAAGCTAACGACTCCTCGGGACGCCTGTAGACTGTCA
GCGGTGGCATCAGTGTTTTCGTCGGCGGCGGAGTCGGACTCTTTGTGGGAGAGTTTCCTG
CCGCCCGATTATCTGGAGATCGTCAGCCGGTCGTCGGAGTCTCCGTCTCGACGTGATTTC
TCCACCAAGAAGGAGCTCTTCTTCAGTCTCTGCGATTCTCCTCTGTTGATCGATGGGGGC
AGAAGGGGCTTTTGGTTGGAGAAGCAAAGTGGAAAAAAATGTTACATGTTAGCAGCAAGA
GAACTCAGTATTACATGGGGTGATACTCCTGAGTATTGGACATGGACTTCTATACCAGAG
TCTCGATTTTCTGAGGTCGCATTTCTTAATGAAGTTTGTTGGTTTGAAGTTAAAGGTAAA
ATAGATACTGACATGTTGTCTTTGAGAACAAAGTATGCAGCTTACCTTGTGTTTGATAGG
AGAGATTCGTATGGATTTGAAAATGTCGAGGTGAAATCATCAGTTGGAATTATTGGAAGT
GAAGCCACTGAGAACATAATTTATTTAGACAAAGATGCAAGCGAAGAAGAAGATACGGAG
GATGAACTTGTGAGTATTCAGAATGTAAGAAGCTGGATTAATGATACTCTGACTCAATTG
TATTCATCACAAGAACCAGATAAAGAACTTGTAAGTTTTGAAGATGTGAGAACTTGGATG
AACAAAAATATATTTCAATTGCATTCCTCACATGAACCACAAGAACCTGGGGTTTCTACA
AAAGGCGATGGTCCATATCCAAATATGAGAAAAGATGCATGGGTTGAGATTGAATTGGGC
GAGTTCTTTAATGAAGGAGGAGGAAATAAGGAGTTAGAGATTGCCATCAAGCAGTTTGAT
GGTCATTGGAAACAAGGTCTTATTATTGAAGGGATCGAGATTAGACCAAAAAATGATTAG
ATGCTTCAATATCTTCCAAGGGTTTTTATTTATTTATTTATTTATTATTATTATTATTAT
TATTATTATTCATTTATAATCTACTCATATTTGATAGGGCAAGTCATGCAACTATACATC
ACAGGAAAAAAAAAAAAAAAAGTGTTTAGAACTTTGCTTGTTCCTTTTCAATTTTAGTGT
AAAGTGGGAAAAAATATTATCAATTCATGTATTTCAACAGTGATTTTGAATTTCTTCCAA
AATGACCCTCAAATGTTGAGGACAAGTACCTTACTACATTAAAAGTTGTTATCAAGT