Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0203g00100.t01
CDS Infomation

cds chromosome:12X:Un:11936179:11952451:1 gene:VIT_00s0203g00100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTTGCATTCACATTTGGAGAGCTTGCATTAGCTCAGAGACCATTGGAATACACTGAT
CACTACCCATCGAGGAATACTCTGTATATGCGTGCACAAGATGGACATGCTTATGTTACC
TCATTACTTTTTTCAGTATTTGAAGGTGTTGTCTTGTTCCTGAGAGCTCTTTATTTGGCA
ATTCTGTTTTCACCCTGCATAGTAATGGCTCCATTTGCGGATTCTTTTGGTCATCGGTTT
AGGAATCTATGGCTTCAGGTTGTTCATGGTACACTGGAAAAGGCAGGTCCAGCCTTCATA
AAGTGGGGCCAATGGGCAGCTACACGACCAGATCTCTTTGCTAGAGATATATGCACCAAA
CTGGCAGAGCTTCACACTAAAGCTCCTGAACATAGCTTTGCATACACAAAAAAAACTATT
GAAAAAGCATTTGGTCGCAATCTTTCTGAGATTTTTGAGGATTTTGAGGAGTTACCTGTA
GCATCTGGAAGTATTGCTCAGGTGCATCGAGCTTCTCTGAAATTTCGGTACCCTGGTCAA
CAAGTCAAGCCTGTTGTAGTTGCAGTAAAAGTTAGACATCCTGGTGTTGGTGAATCAATT
AGGAGGGATTTTCTGATTATTAATTTGGTAGCAAAAATTTCAAATTTCATTCCTACATTG
AGGTGGTTGAGATTGGATGAAAGTGTACAACAGTTTGCAGTTTTCATGATGTCTCAAGTT
GACCTTGCAAGGGAAGCTGCCCATTTGAGCCGCTTTATTTACAATTTCCGCCGATGGAAA
GATGTTTCTTTTCCTAAACCTGTGTATCCACTTGTGCATCCTGCTGTTTTGGTGGAGAGT
TATGAGCACGGTGAGAGTGTCTCACACTATGTTGATGATCTTGAAGGGCAGAAACGGATC
AAAAGTGCACTTGCTCACATTGGGACTCATGCTCTCCTGAAGATGCTTCTGGTGGACAAC
TTTATTCATGCCGACATGCATCCTGGAAATATCCTTGTTCGGGTAACTCAGAGCAAGTCT
TCTCGGAAACGGCTCTTCAAATCGAAGCCTCATGTCATTTTCCTTGATGTAGGCATGACT
GCTGAACTTTCTAAGAGTGATCAAGTGAATTTGTTGGGATTCTTTAAGGCTGTTGCTCGG
CGAGATGGCCGTACTGCTGCAGAATGCGCACTCAGATTATCTAAGCAACAAAATTGCCCA
AATCCGAAGGCCTTTATTAAGGAAGTGGAAGAGTCATTCAGTTTCTGGGGTACACCAGAA
GGTGATTCAGTCCATCCTGCCGAGTGCATGCAGCAATTACTTGAAAAAGTTAGGCGTCAT
AAAGTCAATATAGATGGCAATGTATGCACTGTAATGGTAACAACATTGGTTCTTGAGGGT
TGGCAGAGGAAGCTTGATCCAGGATACAATGTGATGCAAACGCTACAAACGCTGCTACTC
AGAGCTGACTGGGCAAAGTCTCTTTCATACACAATCGATGGGCTCATGGCCCCATAA

Peptide Sequence

PEP ID

VIT_00s0203g00100.t01
PEP Infomation

pep chromosome:12X:Un:11936179:11952451:1 gene:VIT_00s0203g00100 transcript:VIT_00s0203g00100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MFAFTFGELALAQRPLEYTDHYPSRNTLYMRAQDGHAYVTSLLFSVFEGVVLFLRALYLA
ILFSPCIVMAPFADSFGHRFRNLWLQVVHGTLEKAGPAFIKWGQWAATRPDLFARDICTK
LAELHTKAPEHSFAYTKKTIEKAFGRNLSEIFEDFEELPVASGSIAQVHRASLKFRYPGQ
QVKPVVVAVKVRHPGVGESIRRDFLIINLVAKISNFIPTLRWLRLDESVQQFAVFMMSQV
DLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVESYEHGESVSHYVDDLEGQKRI
KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVTQSKSSRKRLFKSKPHVIFLDVGMT
AELSKSDQVNLLGFFKAVARRDGRTAAECALRLSKQQNCPNPKAFIKEVEESFSFWGTPE
GDSVHPAECMQQLLEKVRRHKVNIDGNVCTVMVTTLVLEGWQRKLDPGYNVMQTLQTLLL
RADWAKSLSYTIDGLMAP

Transcript Sequence

Transcript ID

VIT_00s0203g00100.t01
Transcript Infomation

cdna chromosome:12X:Un:11936179:11952451:1 gene:VIT_00s0203g00100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACTTTTGACATTTCGGAAAATTAGGAGAGTTGCAAGTTCCATTCTTAATAACCAGAGGAG
CACCTCTTCAGAAGTAGGAAAGTGTCGGGTGGTTGTTCCAGTTGGATTACATTTTCCACA
GTACAGATTATACTCGCATTTTGTCTTCTCTAGAAGGGGGCATGCTCCATTCACAGGTTT
TGGAACCAGGAACAGTATTTGCAAGCATGGATATTCCAAGAATTTCTCTGCTGTCTCAGC
AAGTAATGTGGCCACACATCATGCCCAAGTTGCTTGGAGAAGGCTTTATGAAATATTCTC
TTGCAATGGCAAAACTTTTCCCCCCTTAGGTAGGATTGCTCAAGCTGTTAGCTTGGCCTT
AAGCCGCTCTCACTTGGTGGTTCCTGGTATGTTTGCATTCACATTTGGAGAGCTTGCATT
AGCTCAGAGACCATTGGAATACACTGATCACTACCCATCGAGGAATACTCTGTATATGCG
TGCACAAGATGGACATGCTTATGTTACCTCATTACTTTTTTCAGTATTTGAAGGTGTTGT
CTTGTTCCTGAGAGCTCTTTATTTGGCAATTCTGTTTTCACCCTGCATAGTAATGGCTCC
ATTTGCGGATTCTTTTGGTCATCGGTTTAGGAATCTATGGCTTCAGGTTGTTCATGGTAC
ACTGGAAAAGGCAGGTCCAGCCTTCATAAAGTGGGGCCAATGGGCAGCTACACGACCAGA
TCTCTTTGCTAGAGATATATGCACCAAACTGGCAGAGCTTCACACTAAAGCTCCTGAACA
TAGCTTTGCATACACAAAAAAAACTATTGAAAAAGCATTTGGTCGCAATCTTTCTGAGAT
TTTTGAGGATTTTGAGGAGTTACCTGTAGCATCTGGAAGTATTGCTCAGGTGCATCGAGC
TTCTCTGAAATTTCGGTACCCTGGTCAACAAGTCAAGCCTGTTGTAGTTGCAGTAAAAGT
TAGACATCCTGGTGTTGGTGAATCAATTAGGAGGGATTTTCTGATTATTAATTTGGTAGC
AAAAATTTCAAATTTCATTCCTACATTGAGGTGGTTGAGATTGGATGAAAGTGTACAACA
GTTTGCAGTTTTCATGATGTCTCAAGTTGACCTTGCAAGGGAAGCTGCCCATTTGAGCCG
CTTTATTTACAATTTCCGCCGATGGAAAGATGTTTCTTTTCCTAAACCTGTGTATCCACT
TGTGCATCCTGCTGTTTTGGTGGAGAGTTATGAGCACGGTGAGAGTGTCTCACACTATGT
TGATGATCTTGAAGGGCAGAAACGGATCAAAAGTGCACTTGCTCACATTGGGACTCATGC
TCTCCTGAAGATGCTTCTGGTGGACAACTTTATTCATGCCGACATGCATCCTGGAAATAT
CCTTGTTCGGGTAACTCAGAGCAAGTCTTCTCGGAAACGGCTCTTCAAATCGAAGCCTCA
TGTCATTTTCCTTGATGTAGGCATGACTGCTGAACTTTCTAAGAGTGATCAAGTGAATTT
GTTGGGATTCTTTAAGGCTGTTGCTCGGCGAGATGGCCGTACTGCTGCAGAATGCGCACT
CAGATTATCTAAGCAACAAAATTGCCCAAATCCGAAGGCCTTTATTAAGGAAGTGGAAGA
GTCATTCAGTTTCTGGGGTACACCAGAAGGTGATTCAGTCCATCCTGCCGAGTGCATGCA
GCAATTACTTGAAAAAGTTAGGCGTCATAAAGTCAATATAGATGGCAATGTATGCACTGT
AATGGTAACAACATTGGTTCTTGAGGGTTGGCAGAGGAAGCTTGATCCAGGATACAATGT
GATGCAAACGCTACAAACGCTGCTACTCAGAGCTGACTGGGCAAAGTCTCTTTCATACAC
AATCGATGGGCTCATGGCCCCATAAGAAGGCAAACGCTACAAACGCTGCTACTCAGAGCT
GACTGGGCAAAGTCTCTTTCATACACAATCGATGGGCTCATGGCCCCATAAGAAGGTTAT
TATATCTTGTTTTTCCTAAACAATTTTGACAGTCAAATTGCAAAAATATACATCAGTCCT
AAGAAATGACATTTGAATGTCTTAGGCGAACCACACCGCTGGTCAGCTGTTTATGATGTC
AGAGTCTGACATGGTCAAACTTTCAAGGGTTTGTTGCATCAGTTTGGCCTTTTTGTCTTT
GTATAATTTACTTACACAAATGATCATTTATAACAAGCTGTAGCAACACACTATTGCAGC
AAGGCAATAAGGG